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PDB: 2899 results

2CNH
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BU of 2cnh by Molmil
Structural Insights into the Design of Nonpeptidic Isothiazolidinone- Containing Inhibitors of Protein Tyrosine Phosphatase 1B
Descriptor: CALCIUM ION, N-[(1S)-1-(1H-BENZIMIDAZOL-2-YL)-2-{4-[(5S)-1,1-DIOXIDO-3-OXOISOTHIAZOLIDIN-5-YL]PHENYL}ETHYL]-4-METHYL-3,4-DIHYDRO-2H-1,4-BENZOXAZINE-7-SULFONAMIDE, TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 1
Authors:Ala, P.J, Gonneville, L, Hillman, M, Becker-Pasha, M, Yue, E.W, Douty, B, Wayland, B, Polam, P, Crawley, M.L, McLaughlin, E, Sparks, R.B, Glass, B, Takvorian, A, Combs, A.P, Burn, T.C, Hollis, G.F, Wynn, R.
Deposit date:2006-05-21
Release date:2006-09-27
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Insights Into the Design of Nonpeptidic Isothiazolidinone-Containing Inhibitors of Protein- Tyrosine Phosphatase 1B.
J.Biol.Chem., 281, 2006
2CM3
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BU of 2cm3 by Molmil
Structure of Protein Tyrosine Phosphatase 1B (C2)
Descriptor: CALCIUM ION, TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 1
Authors:Ala, P.J, Gonneville, L, Hillman, M.C, Becker-Pasha, M, Wei, M, Reid, B.G, Klabe, R, Yue, E.W, Wayland, B, Douty, B, Combs, A.P, Polam, P, Wasserman, Z, Bower, M, Burn, T.C, Hollis, G.F, Wynn, R.
Deposit date:2006-05-04
Release date:2006-08-17
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Basis for Inhibition of Protein-Tyrosine Phosphatase 1B by Isothiazolidinone Heterocyclic Phosphonate Mimetics.
J.Biol.Chem., 281, 2006
7PDO
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BU of 7pdo by Molmil
Crystal structure of Mycobacterium hassiacum glucosyl-3-phosphoglycerate synthase at pH 5.5 in complex with UDP
Descriptor: CHLORIDE ION, Glucosyl-3-phosphoglycerate synthase, URIDINE-5'-DIPHOSPHATE
Authors:Silva, A, Nunes-Costa, D, Barbosa Pereira, P.J, Macedo-Ribeiro, S.
Deposit date:2021-08-05
Release date:2023-02-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Crystal structure of Mycobacterium hassiacum glucosyl-3-phosphoglycerate synthase at pH 5.5 in complex with UDP
To Be Published
7PD5
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BU of 7pd5 by Molmil
Crystal structure of Mycobacterium hassiacum glucosyl-3-phosphoglycerate synthase at pH 5.5 in complex with 4-aminobenzoic acid
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4-AMINOBENZOIC ACID, CHLORIDE ION, ...
Authors:Silva, A, Nunes-Costa, D, Barbosa Pereira, P.J, Macedo-Ribeiro, S.
Deposit date:2021-08-04
Release date:2023-02-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of Mycobacterium hassiacum glucosyl-3-phosphoglycerate synthase at pH 5.5 in complex with 4-aminobenzoic acid
To Be Published
7PE4
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BU of 7pe4 by Molmil
Crystal structure of Mycobacterium hassiacum glucosyl-3-phosphoglycerate synthase at pH 5.5 in complex with UDP-glucose
Descriptor: BICARBONATE ION, CHLORIDE ION, Glucosyl-3-phosphoglycerate synthase, ...
Authors:Silva, A, Barbosa Pereira, P.J, Macedo-Ribeiro, S.
Deposit date:2021-08-09
Release date:2023-02-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure of Mycobacterium hassiacum glucosyl-3-phosphoglycerate synthase at pH 5.5 in complex with UDP-glucose
To Be Published
7PHO
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BU of 7pho by Molmil
Crystal structure of Mycobacterium hassiacum glucosyl-3-phosphoglycerate synthase at pH 7.1 in complex with 4-hydroxybenzaldehyde
Descriptor: BICARBONATE ION, D-MALATE, GLYCEROL, ...
Authors:Nunes-Costa, D, Silva, A, Barbosa Pereira, P.J, Macedo-Ribeiro, S.
Deposit date:2021-08-17
Release date:2023-03-01
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.27 Å)
Cite:Crystal structure of Mycobacterium hassiacum glucosyl-3-phosphoglycerate synthase at pH 7.1 in complex with 4-hydroxybenzaldehyde
To Be Published
7AOG
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BU of 7aog by Molmil
14-3-3 sigma in complex with Pin1 binding site pS72
Descriptor: 14-3-3 protein sigma, CALCIUM ION, CHLORIDE ION, ...
Authors:Wolter, M, Dijck, L.v, Cossar, P.J, Ottmann, C.
Deposit date:2020-10-14
Release date:2021-06-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Reversible Covalent Imine-Tethering for Selective Stabilization of 14-3-3 Hub Protein Interactions.
J.Am.Chem.Soc., 143, 2021
6FR4
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BU of 6fr4 by Molmil
003 TCR Study of CDR Loop Flexibility
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, GLYCEROL, ...
Authors:Rizkallah, P.J, Cole, D.K.
Deposit date:2018-02-15
Release date:2018-04-18
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:In Silicoand Structural Analyses Demonstrate That Intrinsic Protein Motions Guide T Cell Receptor Complementarity Determining Region Loop Flexibility.
Front Immunol, 9, 2018
8SME
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BU of 8sme by Molmil
Structure of SPO1 phage Tad2 in apo state
Descriptor: Gp34.65
Authors:Lu, A, Yirmiya, E, Leavitt, A, Avraham, C, Osterman, I, Garb, J, Antine, S.P, Mooney, S.E, Hobbs, S.J, Amitai, G, Sorek, R, Kranzusch, P.J.
Deposit date:2023-04-26
Release date:2023-11-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Phages overcome bacterial immunity via diverse anti-defence proteins.
Nature, 625, 2024
7UXG
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BU of 7uxg by Molmil
Crystal structure of putative serine protease YdgD from Escherichia coli
Descriptor: Serine protease
Authors:Stogios, P.J, Michalska, K, Skarina, T, Di Leo, R, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2022-05-05
Release date:2022-05-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Crystal structure of putative serine protease YdgD from Escherichia coli
To Be Published
7V09
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BU of 7v09 by Molmil
Crystal structure of ECL_RS08780, putative sugar transport system periplasmic sugar-binding protein
Descriptor: MAGNESIUM ION, Multiple sugar transport system periplasmic sugar-binding protein
Authors:Stogios, P.J, Skarina, T, Mesa, N, Di Leo, R, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2022-05-10
Release date:2022-05-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of ECL_RS08780, putative sugar transport system periplasmic sugar-binding protein
To Be Published
7RUD
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BU of 7rud by Molmil
DAHP synthase complex with trifluoropyruvate oxime
Descriptor: (2Z)-3,3,3-trifluoro-2-(hydroxyimino)propanoic acid, Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive
Authors:Heimhalt, M, Mukherjee, P, Grainger, R, Szabla, R, Brown, C, Turner, R, Junop, M.S, Berti, P.J.
Deposit date:2021-08-16
Release date:2021-11-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:An Inhibitor-in-Pieces Approach to DAHP Synthase Inhibition: Potent Enzyme and Bacterial Growth Inhibition.
Acs Infect Dis., 7, 2021
7RUE
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BU of 7rue by Molmil
DAHP synthase complexed with trifluoropyruvate semicarbazone
Descriptor: (2E)-2-(2-carbamoylhydrazinylidene)-3,3,3-trifluoropropanoic acid, MANGANESE (II) ION, Phospho-2-dehydro-3-deoxyheptonate aldolase, ...
Authors:Heimhalt, M, Mukherjee, P, Grainger, R, Szabla, R, Brown, C, Turner, R, Junop, M.S, Berti, P.J.
Deposit date:2021-08-16
Release date:2021-11-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:An Inhibitor-in-Pieces Approach to DAHP Synthase Inhibition: Potent Enzyme and Bacterial Growth Inhibition.
Acs Infect Dis., 7, 2021
8UWP
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BU of 8uwp by Molmil
Crystal structure of SETDB1 Tudor domain in complex with MR46747
Descriptor: (3S)-N-(4-chloro-3-{[2-(diethylamino)ethyl]carbamoyl}phenyl)-3-(diethylamino)pyrrolidine-1-carboxamide, 1,2-ETHANEDIOL, Histone-lysine N-methyltransferase SETDB1, ...
Authors:Shrestha, S, Beldar, S, Dong, A, Ackloo, S, Brown, P.J, Arrowsmith, C.H, Edwards, A.M, Halabelian, L, Structural Genomics Consortium (SGC)
Deposit date:2023-11-07
Release date:2023-11-22
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Crystal structure of SETDB1 Tudor domain in complex with MR46747
To be published
2F1D
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BU of 2f1d by Molmil
X-Ray Structure of imidazoleglycerol-phosphate dehydratase
Descriptor: Imidazoleglycerol-phosphate dehydratase 1, MANGANESE (II) ION, SULFATE ION
Authors:Rice, D.W, Glynn, S.E, Baker, P.J, Sedelnikova, S.E, Davies, C.L, Eadsforth, T.C.
Deposit date:2005-11-14
Release date:2006-01-24
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure and mechanism of imidazoleglycerol-phosphate dehydratase.
Structure, 13, 2005
7S7P
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BU of 7s7p by Molmil
NMR solution structure of a neurotoxic thionin from Urtica ferox
Descriptor: urthionin-Uf1a
Authors:Durek, T, Harvey, P.J, Craik, D.J.
Deposit date:2021-09-16
Release date:2022-07-27
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Neurotoxic and cytotoxic peptides underlie the painful stings of the tree nettle Urtica ferox.
J.Biol.Chem., 298, 2022
8VGC
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BU of 8vgc by Molmil
Complex of ExbD with D-box peptide: Orthorhombic form
Descriptor: Biopolymer transport protein ExbD, GLN-PRO-ILE-SER-VAL-THR-MET-VAL-THR-PRO
Authors:Loll, P.J.
Deposit date:2023-12-27
Release date:2024-02-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Discovery and structural characterization of the D-box, a conserved TonB motif that couples an inner-membrane motor to outer-membrane transport.
J.Biol.Chem., 300, 2024
8VGD
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BU of 8vgd by Molmil
Complex of ExbD with D-box peptide: Tetragonal form
Descriptor: Biopolymer transport protein ExbD, GLN-PRO-ILE-SER-VAL-THR-MET-VAL-THR
Authors:Loll, P.J.
Deposit date:2023-12-27
Release date:2024-02-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Discovery and structural characterization of the D-box, a conserved TonB motif that couples an inner-membrane motor to outer-membrane transport.
J.Biol.Chem., 300, 2024
4K1P
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BU of 4k1p by Molmil
Structure of the NheA component of the Nhe toxin from Bacillus cereus
Descriptor: 1,2-ETHANEDIOL, NheA, SULFATE ION
Authors:Ganash, M, Phung, D, Artymiuk, P.J.
Deposit date:2013-04-05
Release date:2013-09-18
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structure of the NheA Component of the Nhe Toxin from Bacillus cereus: Implications for Function.
Plos One, 8, 2013
2GFO
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BU of 2gfo by Molmil
Structure of the Catalytic Domain of Human Ubiquitin Carboxyl-terminal Hydrolase 8
Descriptor: Ubiquitin carboxyl-terminal hydrolase 8, ZINC ION
Authors:Walker, J.R, Avvakumov, G.V, Xue, S, Newman, E.M, Finerty Jr, P.J, Butler-Cole, C, Weigelt, J, Sundstrom, M, Arrowsmith, C, Edwards, A, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC)
Deposit date:2006-03-22
Release date:2006-04-04
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Amino-terminal Dimerization, NRDP1-Rhodanese Interaction, and Inhibited Catalytic Domain Conformation of the Ubiquitin-specific Protease 8 (USP8).
J.Biol.Chem., 281, 2006
2FAZ
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BU of 2faz by Molmil
Ubiquitin-Like Domain of Human Nuclear Zinc Finger Protein NP95
Descriptor: Ubiquitin-like containing PHD and RING finger domains protein 1
Authors:Walker, J.R, Wybenga-Groot, L, Doherty, R.S, Finerty Jr, P.J, Newman, E, Mackenzie, F.M, Weigelt, J, Sundstrom, M, Arrowsmith, C, Edwards, A, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC)
Deposit date:2005-12-08
Release date:2005-12-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Ubiquitin-Like Domain of Human Nuclear Zinc Finger Protein NP95
To be Published
2G7R
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BU of 2g7r by Molmil
X-ray structure of the death domain of the human mucosa associated lymphoid tissue lymphoma translocation protein 1
Descriptor: Mucosa-associated lymphoid tissue lymphoma translocation protein 1
Authors:Walker, J.R, Wybenga-Groot, L, Newman, E.M, Finerty Jr, P.J, Butler-Cole, C, Weigelt, J, Sundstrom, M, Arrowsmith, C, Edwards, A, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC)
Deposit date:2006-02-28
Release date:2006-04-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:X-ray structure of the death domain of the human mucosa associated lymphoid tissue lymphoma translocation protein 1
To be Published
2GC3
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BU of 2gc3 by Molmil
The crystal structure of phosphoglucose isomerase from Pyrococcus furiosus in complex with mannose 6-phosphate and zinc
Descriptor: 6-O-phosphono-alpha-D-mannopyranose, Glucose-6-phosphate isomerase, ZINC ION
Authors:Berrisford, J.M, Rice, D.W, Baker, P.J.
Deposit date:2006-03-13
Release date:2006-04-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Evidence Supporting a cis-enediol-based Mechanism for Pyrococcus furiosus Phosphoglucose Isomerase
J.Mol.Biol., 358, 2006
2CMC
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BU of 2cmc by Molmil
Structural Basis for Inhibition of Protein Tyrosine Phosphatase 1B by Isothiazolidinone Heterocyclic Phosphonate Mimetics
Descriptor: N-ACETYL-L-PHENYLALANYL-4-[DIFLUORO(PHOSPHONO)METHYL]-L-PHENYLALANINAMIDE, SULFATE ION, TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 1, ...
Authors:Ala, P.J, Gonneville, L, Hillman, M.C, Becker-Pasha, M, Wei, M, Reid, B.G, Klabe, R, Yue, E.W, Wayland, B, Douty, B, Combs, A.P, Polam, P, Wasserman, Z, Bower, M, Burn, T.C, Hollis, G.F, Wynn, R.
Deposit date:2006-05-04
Release date:2006-08-17
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Basis for Inhibition of Protein-Tyrosine Phosphatase 1B by Isothiazolidinone Heterocyclic Phosphonate Mimetics.
J.Biol.Chem., 281, 2006
2CNF
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BU of 2cnf by Molmil
Structural Insights into the Design of Nonpeptidic Isothiazolidinone- Containing Inhibitors of Protein Tyrosine Phosphatase 1B
Descriptor: (5S)-5-{4-[(2S)-2-(1H-BENZIMIDAZOL-2-YL)-2-(1,3-BENZOTHIAZOL-2-YLAMINO)ETHYL]PHENYL}ISOTHIAZOLIDIN-3-ONE 1,1-DIOXIDE, MAGNESIUM ION, TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 1
Authors:Ala, P.J, Gonneville, L, Hillman, M, Becker-Pasha, M, Yue, E.W, Douty, B, Wayland, B, Polam, P, Crawley, M.L, McLaughlin, E, Sparks, R.B, Glass, B, Takvorian, A, Combs, A.P, Burn, T.C, Hollis, G.F, Wynn, R.
Deposit date:2006-05-21
Release date:2006-09-27
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Insights Into the Design of Nonpeptidic Isothiazolidinone-Containing Inhibitors of Protein- Tyrosine Phosphatase 1B.
J.Biol.Chem., 281, 2006

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