Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 45910 results

8VUZ
DownloadVisualize
BU of 8vuz by Molmil
L5A7 Fab bound to 28H6E11 anti-idiotype Fab
Descriptor: 28H6E11 Fab Heavy Chain, 28H6E11 Fab Light Chain, L5A7 Fab Heavy Chain, ...
Authors:Olia, A.S, Morano, N.C, Kwong, P.D.
Deposit date:2024-01-30
Release date:2024-05-22
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.95 Å)
Cite:Anti-idiotype isolation of a broad and potent influenza A virus-neutralizing human antibody.
Front Immunol, 15, 2024
5GN9
DownloadVisualize
BU of 5gn9 by Molmil
Crystal structure of alternative oxidase from Trypanosoma brucei brucei complexed with cumarin derivative-17b
Descriptor: 4-butyl-7,8-bis(oxidanyl)chromen-2-one, Alternative oxidase, mitochondrial, ...
Authors:Balogun, E.O, Inaoka, D.K, Shiba, T, Tsuge, T, May, B, Sato, T, Kido, Y, Takeshi, N, Aoki, T, Honma, T, Tanaka, A, Inoue, M, Matsuoka, S, Michels, P.A.M, Watanabe, Y, Moore, A.L, Harada, S, Kita, K.
Deposit date:2016-07-19
Release date:2017-07-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Discovery of trypanocidal coumarins with dual inhibition of both the glycerol kinase and alternative oxidase ofTrypanosoma brucei brucei.
Faseb J., 33, 2019
7KB0
DownloadVisualize
BU of 7kb0 by Molmil
O-acety-L-homoserine aminocarboxypropyltransferase (MetY) from Thermotoga maritima with pyridoxal-5-phosphate (PLP) bound in the internal aldimine state
Descriptor: O-acetyl-L-homoserine sulfhydrylase
Authors:Brewster, J.L, Pachl, P, Squire, C, Selmer, M, Patrick, W.M.
Deposit date:2020-10-01
Release date:2021-06-23
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structures and kinetics of Thermotoga maritima MetY reveal new insights into the predominant sulfurylation enzyme of bacterial methionine biosynthesis.
J.Biol.Chem., 296, 2021
6H8X
DownloadVisualize
BU of 6h8x by Molmil
Beta-phosphoglucomutase from Lactococcus lactis in an open conformer complexed with magnesium trifluoride to 1.8 A.
Descriptor: 1,2-ETHANEDIOL, 1,3-PROPANDIOL, ACETATE ION, ...
Authors:Robertson, A.J, Bisson, C, Waltho, J.P.
Deposit date:2018-08-03
Release date:2020-08-26
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Transition state of phospho-enzyme hydrolysis in beta-phosphoglucomutase.
To Be Published
5NNB
DownloadVisualize
BU of 5nnb by Molmil
Isatin hydrolase A (IHA) from Labrenzia aggregata with isatinate bound
Descriptor: Isatinic acid, MANGANESE (II) ION, isatin hydrolase A
Authors:Sommer, T, Bjerregaard-Andersen, K, Morth, J.P.
Deposit date:2017-04-08
Release date:2018-05-16
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A fundamental catalytic difference between zinc and manganese dependent enzymes revealed in a bacterial isatin hydrolase.
Sci Rep, 8, 2018
1D3U
DownloadVisualize
BU of 1d3u by Molmil
TATA-BINDING PROTEIN/TRANSCRIPTION FACTOR (II)B/BRE+TATA-BOX COMPLEX FROM PYROCOCCUS WOESEI
Descriptor: DNA 23-MER: BRE+TATA-BOX, DNA 24-MER: BRE+TATA-BOX, TATA-BINDING PROTEIN, ...
Authors:Littlefield, O, Korkhin, Y, Sigler, P.B.
Deposit date:1999-10-01
Release date:1999-11-15
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The structural basis for the oriented assembly of a TBP/TFB/promoter complex.
Proc.Natl.Acad.Sci.USA, 96, 1999
6HR0
DownloadVisualize
BU of 6hr0 by Molmil
Optimizing electroactive organisms: the effect of orthologous proteins
Descriptor: Cytochrome C, HEME C, PHOSPHITE ION
Authors:Trindade, I.B, Moe, E, Matias, P.
Deposit date:2018-09-26
Release date:2019-10-16
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.04 Å)
Cite:Optimizing electroactive organisms: the effect of orthologous proteins
Frontiers in Energy Research, 2019
1SDJ
DownloadVisualize
BU of 1sdj by Molmil
X-RAY STRUCTURE OF YDDE_ECOLI NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET ET25.
Descriptor: Hypothetical protein yddE, SULFATE ION
Authors:Kuzin, A.P, Edstrom, W, Skarina, T, Korniyenko, Y, Savchenko, A, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2004-02-13
Release date:2004-02-24
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure and function of the phenazine biosynthetic protein PhzF from Pseudomonas fluorescens.
Proc.Natl.Acad.Sci.Usa, 101, 2004
3PVO
DownloadVisualize
BU of 3pvo by Molmil
Monoclinic form of Human C-Reactive Protein
Descriptor: C-Reactive Protein, CALCIUM ION
Authors:Guillon, C, Mavoungou Bigouagou, U, Jeannin, P, Delneste, Y, Gouet, P.
Deposit date:2010-12-07
Release date:2012-01-11
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3 Å)
Cite:A Staggered Decameric Assembly of Human C-Reactive Protein Stabilized by Zinc Ions Revealed by X-ray Crystallography.
Protein Pept.Lett., 22, 2014
8RH0
DownloadVisualize
BU of 8rh0 by Molmil
Trimeric HSV-1F gB ectodomain in postfusion conformation with three bound HDIT102 Fab molecules.
Descriptor: Envelope glycoprotein B, HDIT102 Fab heavy chain
Authors:Kalbermatter, D, Seyfizadeh, N, Imhof, T, Ries, M, Mueller, C, Jenner, L, Blumenschein, E, Yendrzheyevskiy, A, Moog, K, Eckert, D, Engel, R, Diebolder, P, Chami, M, Krauss, J, Schaller, T, Arndt, M.
Deposit date:2023-12-14
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (3.44 Å)
Cite:Development of a highly effective combination monoclonal antibody therapy against Herpes simplex virus.
J.Biomed.Sci., 31, 2024
8RH1
DownloadVisualize
BU of 8rh1 by Molmil
Trimeric HSV-2F gB ectodomain in postfusion conformation with three bound HDIT101 Fab molecules.
Descriptor: Envelope glycoprotein B, HDIT101 Fab heavy chain, HDIT101 Fab light chain
Authors:Kalbermatter, D, Seyfizadeh, N, Imhof, T, Ries, M, Mueller, C, Jenner, L, Blumenschein, E, Yendrzheyevskiy, A, Moog, K, Eckert, D, Engel, R, Diebolder, P, Chami, M, Krauss, J, Schaller, T, Arndt, M.
Deposit date:2023-12-14
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (3.45 Å)
Cite:Development of a highly effective combination monoclonal antibody therapy against Herpes simplex virus.
J.Biomed.Sci., 31, 2024
4WZY
DownloadVisualize
BU of 4wzy by Molmil
Structure of mycobacterial maltokinase, the missing link in the essential GlgE-pathway (ATP complex)
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Maltokinase
Authors:Fraga, J, Empadinhas, N, Pereira, P.J.B, Macedo-Ribeiro, S.
Deposit date:2014-11-20
Release date:2015-02-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Structure of mycobacterial maltokinase, the missing link in the essential GlgE-pathway.
Sci Rep, 5, 2015
6HED
DownloadVisualize
BU of 6hed by Molmil
PAN-proteasome in state 5
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Majumder, P, Rudack, T, Beck, F, Baumeister, W.
Deposit date:2018-08-20
Release date:2018-12-26
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (6.95 Å)
Cite:Cryo-EM structures of the archaeal PAN-proteasome reveal an around-the-ring ATPase cycle.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
7WOK
DownloadVisualize
BU of 7wok by Molmil
Crystal structure of HSA soaked with cisplatin for one week
Descriptor: Albumin, Cisplatin, PHOSPHATE ION
Authors:Chen, S.L, Yuan, C, Jiang, L.G, Luo, Z.P, Huang, M.D.
Deposit date:2022-01-21
Release date:2022-07-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystallographic analysis of interaction between cisplatin and human serum albumin: Effect of fatty acid.
Int.J.Biol.Macromol., 216, 2022
5UVD
DownloadVisualize
BU of 5uvd by Molmil
Crystal structure of an antigenic nucleotidyltransferase-like protein from Paracoccidioides brasiliensis
Descriptor: MAGNESIUM ION, Nucleotidyltransferase-like protein
Authors:Nagem, R.A.P, Costa, M.A.F, Rodrigues, F.T.G, Coitinho, J.B.C.
Deposit date:2017-02-20
Release date:2018-01-31
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Structural and immunological characterization of a new nucleotidyltransferase-like antigen from Paracoccidioides brasiliensis.
Mol.Immunol., 112, 2019
1GJU
DownloadVisualize
BU of 1gju by Molmil
Maltosyltransferase from Thermotoga maritima
Descriptor: MALTODEXTRIN GLYCOSYLTRANSFERASE, PHOSPHATE ION
Authors:Roujeinikova, A, Raasch, C, Burke, J, Baker, P.J, Liebl, W, Rice, D.W.
Deposit date:2001-08-02
Release date:2001-09-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The Crystal Structure of Thermotoga Maritima Maltosyltransferase and its Implications for the Molecular Basis of the Novel Transfer Specificity
J.Mol.Biol., 312, 2001
6HGQ
DownloadVisualize
BU of 6hgq by Molmil
Crystal Structure of Human APRT wild type in complex with Hypoxanthine, PRPP and Mg2+
Descriptor: 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose, Adenine phosphoribosyltransferase, GLYCEROL, ...
Authors:Nioche, P, Huyet, J, Ozeir, M.
Deposit date:2018-08-23
Release date:2019-07-31
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for substrate selectivity and nucleophilic substitution mechanisms in human adenine phosphoribosyltransferase catalyzed reaction.
J.Biol.Chem., 294, 2019
5GNZ
DownloadVisualize
BU of 5gnz by Molmil
The M3 mutant structure of Bgl6
Descriptor: Beta-glucosidase, GLYCEROL, beta-D-glucopyranose
Authors:Xie, W, Pang, P, Cao, L.C, Liu, Y.H, Wang, Z.
Deposit date:2016-07-25
Release date:2017-04-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structures of a glucose-tolerant beta-glucosidase provide insights into its mechanism.
J. Struct. Biol., 198, 2017
6HWJ
DownloadVisualize
BU of 6hwj by Molmil
Glucosamine kinase (crystal form A)
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Manso, J.A, Pereira, P.J.B.
Deposit date:2018-10-12
Release date:2019-05-01
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.979 Å)
Cite:Molecular Fingerprints for a Novel Enzyme Family in Actinobacteria with Glucosamine Kinase Activity.
Mbio, 10, 2019
8R47
DownloadVisualize
BU of 8r47 by Molmil
AL amyloid fibril from the FOR010 light chain
Descriptor: lambda 3 immunoglobulin light chain fragment, residues 4-116
Authors:Pfeiffer, P.B, Banerjee, S, Schmidt, M, Faendrich, M.
Deposit date:2023-11-13
Release date:2024-06-26
Method:ELECTRON MICROSCOPY (2.25 Å)
Cite:Light chain mutations contribute to defining the fibril morphology in systemic AL amyloidosis.
Nat Commun, 15, 2024
3L2U
DownloadVisualize
BU of 3l2u by Molmil
Crystal structure of the Prototype Foamy Virus (PFV) intasome in complex with magnesium and GS9137 (Elvitegravir)
Descriptor: 5'-D(*AP*TP*TP*GP*TP*CP*AP*TP*GP*GP*AP*AP*TP*TP*TP*TP*GP*TP*A)-3', 5'-D(*TP*AP*CP*AP*AP*AP*AP*TP*TP*CP*CP*AP*TP*GP*AP*CP*A)-3', 6-(3-chloro-2-fluorobenzyl)-1-[(1S)-1-(hydroxymethyl)-2-methylpropyl]-7-methoxy-4-oxo-1,4-dihydroquinoline-3-carboxylic acid, ...
Authors:Hare, S, Gupta, S.S, Cherepanov, P.
Deposit date:2009-12-15
Release date:2010-02-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Retroviral intasome assembly and inhibition of DNA strand transfer
Nature, 464, 2010
5N40
DownloadVisualize
BU of 5n40 by Molmil
Structure of Yersinia pseudotuberculosis adhesin InvE
Descriptor: DI(HYDROXYETHYL)ETHER, Putative invasin
Authors:Sadana, P, Scrima, A.
Deposit date:2017-02-09
Release date:2017-04-12
Last modified:2017-06-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of the Y. pseudotuberculosis adhesin InvasinE.
Protein Sci., 26, 2017
2VFH
DownloadVisualize
BU of 2vfh by Molmil
Crystal structure of the F96W mutant of Plasmodium falciparum triosephosphate isomerase complexed with 3-phosphoglycerate
Descriptor: 3-PHOSPHOGLYCERIC ACID, TRIOSEPHOSPHATE ISOMERASE
Authors:Gayathri, P, Banerjee, M, Vijayalakshmi, A, Balaram, H, Balaram, P, Murthy, M.R.N.
Deposit date:2007-11-04
Release date:2008-12-09
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Biochemical and Structural Characterization of Residue 96 Mutants of Plasmodium Falciparum Triosephosphate Isomerase: Active-Site Loop Conformation, Hydration and Identification of a Dimer-Interface Ligand-Binding Site.
Acta Crystallogr.,Sect.D, 65, 2009
1JKY
DownloadVisualize
BU of 1jky by Molmil
Crystal Structure of the Anthrax Lethal Factor (LF): Wild-type LF Complexed with the N-terminal Sequence of MAPKK2
Descriptor: Lethal Factor, mitogen-activated protein kinase kinase 2
Authors:Pannifer, A.D, Wong, T.Y, Schwarzenbacher, R, Renatus, M, Petosa, C, Collier, R.J, Bienkowska, J, Lacy, D.B, Park, S, Leppla, S.H, Hanna, P, Liddington, R.C.
Deposit date:2001-07-13
Release date:2001-11-07
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Crystal structure of the anthrax lethal factor.
Nature, 414, 2001
5GTL
DownloadVisualize
BU of 5gtl by Molmil
NADPH complex structure of Aldehyde Dehydrogenase from Bacillus cereus
Descriptor: Betaine-aldehyde dehydrogenase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, SODIUM ION
Authors:Ngo, H.P.T, Hong, S.H, Ho, T.H, Oh, D.K, Kang, L.W.
Deposit date:2016-08-21
Release date:2017-09-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of aldehyde dehydrogenase from Bacillus cereus having atypical bidirectional oxidizing and reducing activities for all-trans-retinal
To Be Published

223790

數據於2024-08-14公開中

PDB statisticsPDBj update infoContact PDBjnumon