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PDB: 46375 results

4L1D
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BU of 4l1d by Molmil
Voltage-gated sodium channel beta3 subunit Ig domain
Descriptor: Sodium channel subunit beta-3
Authors:Namadurai, S, Weimhofer, M, Rajappa, R, Stott, K, Klingauf, J, Chirgadze, D.Y, Jackson, A.P.
Deposit date:2013-06-03
Release date:2014-03-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure and Molecular Imaging of the Nav Channel beta 3 Subunit Indicates a Trimeric Assembly.
J.Biol.Chem., 289, 2014
3J4F
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BU of 3j4f by Molmil
Structure of HIV-1 capsid protein by cryo-EM
Descriptor: capsid protein
Authors:Zhao, G, Perilla, J.R, Meng, X, Schulten, K, Zhang, P.
Deposit date:2013-07-11
Release date:2013-07-24
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (8.6 Å)
Cite:Mature HIV-1 capsid structure by cryo-electron microscopy and all-atom molecular dynamics.
Nature, 497, 2013
7Q21
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BU of 7q21 by Molmil
III2-IV2 respiratory supercomplex from Corynebacterium glutamicum
Descriptor: (1R)-2-(dodecanoyloxy)-1-[(phosphonooxy)methyl]ethyl tetradecanoate, (2R)-2-(hexadecanoyloxy)-3-{[(S)-hydroxy{[(1R,2R,3R,4R,5R,6S)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}propyl (9S)-9-methyloctadecanoate, (2S)-1-(hexadecanoyloxy)propan-2-yl (10S)-10-methyloctadecanoate, ...
Authors:Kovalova, T, Moe, A, Krol, S, Yanofsky, D.J, Bott, M, Sjostrand, D, Rubinstein, J.L, Hogbom, M, Brzezinski, P.
Deposit date:2021-10-22
Release date:2022-02-02
Last modified:2022-03-16
Method:ELECTRON MICROSCOPY (3 Å)
Cite:The respiratory supercomplex from C. glutamicum.
Structure, 30, 2022
6ZPJ
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BU of 6zpj by Molmil
Crystal structure of the unconventional kinetochore protein Leishmania mexicana KKT4 coiled coil domain
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, IMIDAZOLE, Leishmania mexicana KKT4
Authors:Ludzia, P, Lowe, E.D, Marciano, G, Mohammed, S, Redfield, C, Akiyoshi, B.
Deposit date:2020-07-08
Release date:2020-10-21
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural characterization of KKT4, an unconventional microtubule-binding kinetochore protein.
Structure, 29, 2021
4LL3
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BU of 4ll3 by Molmil
Structure of wild-type HIV protease in complex with darunavir
Descriptor: (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, Protease
Authors:Grantz Saskova, K, Rezacova, P, Brynda, J, Kozisek, M, Konvalinka, J.
Deposit date:2013-07-09
Release date:2014-04-16
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Thermodynamic and structural analysis of HIV protease resistance to darunavir - analysis of heavily mutated patient-derived HIV-1 proteases.
Febs J., 281, 2014
4OBZ
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BU of 4obz by Molmil
Structure of Cathepsin D with inhibitor 2-(3,4-dimethoxyphenyl)-N-[N-(4-methylbenzyl)carbamimidoyl]acetamide
Descriptor: 2-(3,4-dimethoxyphenyl)-N-[N-(4-methylbenzyl)carbamimidoyl]acetamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Graedler, U, Czodrowski, P, Tsaklakidis, C, Klein, M, Maskos, K, Leuthner, B.
Deposit date:2014-01-08
Release date:2014-08-13
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure-based optimization of non-peptidic Cathepsin D inhibitors.
Bioorg.Med.Chem.Lett., 24, 2014
4ODN
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BU of 4odn by Molmil
Structure of SlyD from Thermus thermophilus in complex with S2-plus peptide
Descriptor: 30S ribosomal protein S2, CHLORIDE ION, GLYCEROL, ...
Authors:Quistgaard, E.M, Low, C, Nordlund, P.
Deposit date:2014-01-10
Release date:2015-01-14
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (1.598 Å)
Cite:Molecular insights into substrate recognition and catalytic mechanism of the chaperone and FKBP peptidyl-prolyl isomerase SlyD.
BMC Biol., 14, 2016
6ATN
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BU of 6atn by Molmil
Exploring Cystine Dense Peptide Space to Open a Unique Molecular Toolbox
Descriptor: Potassium channel toxin alpha-KTx 4.5
Authors:Gewe, M.M, Rupert, P, Strong, R.K.
Deposit date:2017-08-29
Release date:2018-02-28
Last modified:2018-03-14
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Screening, large-scale production and structure-based classification of cystine-dense peptides.
Nat. Struct. Mol. Biol., 25, 2018
4L9B
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BU of 4l9b by Molmil
Structure of native RBP from lactococcal phage 1358 (CsI derivative)
Descriptor: CESIUM ION, Receptor Binding Protein
Authors:Farenc, C, Spinelli, S, Bebeacua, C, Tremblay, D, Orlov, I, Blangy, S, Klaholz, B.P, Moineau, S, Cambillau, C.
Deposit date:2013-06-18
Release date:2014-04-30
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:A Virulent Siphophage CyoEM Structure and Host Recognition and Infection Mechanism
To be Published
3K6V
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BU of 3k6v by Molmil
M. acetivorans Molybdate-Binding Protein (ModA) in Citrate-Bound Open Form
Descriptor: CITRIC ACID, Solute-binding protein MA_0280
Authors:Chan, S, Giuroiu, I, Chernishof, I, Sawaya, M.R, Chiang, J, Gunsalus, R.P, Arbing, M.A, Perry, L.J.
Deposit date:2009-10-09
Release date:2010-01-12
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Apo and ligand-bound structures of ModA from the archaeon Methanosarcina acetivorans
Acta Crystallogr.,Sect.F, 66, 2010
4L9Q
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BU of 4l9q by Molmil
X-ray study of human serum albumin complexed with teniposide
Descriptor: (5S,5aR,8aR,9R)-9-(4-hydroxy-3,5-dimethoxyphenyl)-8-oxo-5,5a,6,8,8a,9-hexahydrofuro[3',4':6,7]naphtho[2,3-d][1,3]dioxol -5-yl 4,6-O-(thiophen-2-ylmethylidene)-beta-D-glucopyranoside, SERUM ALBUMIN
Authors:Wang, Z, Ho, J.X, Ruble, J, Rose, J.P, Carter, D.C.
Deposit date:2013-06-18
Release date:2013-07-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural studies of several clinically important oncology drugs in complex with human serum albumin.
Biochim.Biophys.Acta, 1830, 2013
3K91
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BU of 3k91 by Molmil
Polysulfane Bridge in Cu-Zn Superoxide Dismutase
Descriptor: PENTASULFIDE-SULFUR, Superoxide dismutase [Cu-Zn]
Authors:You, Z, Cao, X, Taylor, A.B, Hart, P.J, Levine, R.L.
Deposit date:2009-10-15
Release date:2010-01-19
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Characterization of a covalent polysulfane bridge in copper-zinc superoxide dismutase .
Biochemistry, 49, 2010
1DPG
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BU of 1dpg by Molmil
GLUCOSE 6-PHOSPHATE DEHYDROGENASE FROM LEUCONOSTOC MESENTEROIDES
Descriptor: GLUCOSE 6-PHOSPHATE DEHYDROGENASE, PHOSPHATE ION
Authors:Adams, M.J, Rowland, P, Gover, S.
Deposit date:1995-12-04
Release date:1996-03-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:The three-dimensional structure of glucose 6-phosphate dehydrogenase from Leuconostoc mesenteroides refined at 2.0 A resolution.
Structure, 2, 1994
4LBH
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BU of 4lbh by Molmil
5-chloro-2-hydroxyhydroquinone dehydrochlorinase (TftG) from Burkholderia phenoliruptrix AC1100: Apo-form
Descriptor: 5-chloro-2-hydroxyhydroquinone dehydrochlorinase (TftG), DI(HYDROXYETHYL)ETHER
Authors:Hayes, R.P, Lewis, K.M, Xun, L, Kang, C.
Deposit date:2013-06-20
Release date:2013-08-28
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Catalytic Mechanism of 5-Chlorohydroxyhydroquinone Dehydrochlorinase from the YCII Superfamily of Largely Unknown Function.
J.Biol.Chem., 288, 2013
6GYW
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BU of 6gyw by Molmil
Crystal structure of DacA from Staphylococcus aureus
Descriptor: Diadenylate cyclase
Authors:Tosi, T, Freemont, P.S, Grundling, A.
Deposit date:2018-07-02
Release date:2019-01-23
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Inhibition of the Staphylococcus aureus c-di-AMP cyclase DacA by direct interaction with the phosphoglucosamine mutase GlmM.
PLoS Pathog., 15, 2019
6TWN
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BU of 6twn by Molmil
Crystal structure of Talin1 R7R8 in complex with CDK1 (206-223)
Descriptor: CHLORIDE ION, Cyclin-dependent kinase 1, GLYCEROL, ...
Authors:Zacharchenko, T, Muench, S.P, Goult, B.T.
Deposit date:2020-01-13
Release date:2021-05-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Talin mechanosensitivity is modulated by a direct interaction with cyclin-dependent kinase-1.
J.Biol.Chem., 297, 2021
4LBN
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BU of 4lbn by Molmil
Crystal structure of Human galectin-3 CRD in complex with LNnT
Descriptor: CHLORIDE ION, Galectin-3, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose
Authors:Collins, P.M, Blanchard, H.
Deposit date:2013-06-20
Release date:2014-01-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Galectin-3 interactions with glycosphingolipids.
J.Mol.Biol., 426, 2014
6GYY
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BU of 6gyy by Molmil
Crystal structure of DacA from Staphylococcus aureus, N166C/T172C double mutant
Descriptor: Diadenylate cyclase
Authors:Tosi, T, Freemont, P.S, Grundling, A.
Deposit date:2018-07-02
Release date:2019-01-23
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.77 Å)
Cite:Inhibition of the Staphylococcus aureus c-di-AMP cyclase DacA by direct interaction with the phosphoglucosamine mutase GlmM.
PLoS Pathog., 15, 2019
1MFU
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BU of 1mfu by Molmil
Probing the role of a mobile loop in human salivary amylase: Structural studies on the loop-deleted mutant
Descriptor: 4-amino-4,6-dideoxy-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, 4-amino-4,6-dideoxy-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, 5-HYDROXYMETHYL-CHONDURITOL, ...
Authors:Ramasubbu, N, Ragunath, C, Mishra, P.J.
Deposit date:2002-08-13
Release date:2002-11-20
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Probing the role of a mobile loop in substrate binding and enzyme activity of human salivary amylase.
J.Mol.Biol., 325, 2003
3KAF
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BU of 3kaf by Molmil
Structure-guided design of alpha-amino acid-derived Pin1 inhibitors
Descriptor: 3-(1H-benzimidazol-2-yl)-N-(1-benzothiophen-2-ylcarbonyl)-D-alanine, Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
Authors:Baker, L.M, Dokurno, P, Robinson, D.A, Surgenor, A.E, Murray, J.B, Potter, A.J, Moore, J.D.
Deposit date:2009-10-19
Release date:2009-12-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure-guided design of alpha-amino acid-derived Pin1 inhibitors
Bioorg.Med.Chem.Lett., 20, 2010
4LE5
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BU of 4le5 by Molmil
Structure of an Unusual S-adenosylmethionine synthetase from Campylobacter jejuni
Descriptor: S-adenosylmethionine synthetase
Authors:Zano, S.P, Pavlovsky, A.G, Viola, R.E.
Deposit date:2013-06-25
Release date:2014-02-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of an unusual S-adenosylmethionine synthetase from Campylobacter jejuni.
Acta Crystallogr.,Sect.D, 70, 2014
6GIN
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BU of 6gin by Molmil
Crystal structure of the ACVR1 (ALK2) kinase in complex with an Quinazolinone based ALK2 inhibitor with a 4-morpholinophenyl solvent accessible group.
Descriptor: 1,2-ETHANEDIOL, 3-(4-morpholin-4-ylphenyl)-6-quinolin-4-yl-quinazolin-4-one, Activin receptor type-1, ...
Authors:Williams, E, Hudson, L, Bezerra, G.A, Kopec, J, Mahajan, P, Kupinska, K, Hoelder, S, Burgess-Brown, N, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Bullock, A.N.
Deposit date:2018-05-14
Release date:2018-05-23
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Novel Quinazolinone Inhibitors of ALK2 Flip between Alternate Binding Modes: Structure-Activity Relationship, Structural Characterization, Kinase Profiling, and Cellular Proof of Concept.
J. Med. Chem., 61, 2018
4LEW
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BU of 4lew by Molmil
Structure of human cGAS
Descriptor: Cyclic GMP-AMP synthase, ZINC ION
Authors:Li, P.
Deposit date:2013-06-26
Release date:2013-12-25
Last modified:2014-01-08
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Cyclic GMP-AMP Synthase Is Activated by Double-Stranded DNA-Induced Oligomerization.
Immunity, 39, 2013
4LDG
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BU of 4ldg by Molmil
Crystal Structure of CpSET8 from Cryptosporidium, cgd4_370
Descriptor: MALONATE ION, Protein with a SET domain within carboxy region
Authors:Wernimont, A.K, Tempel, W, Loppnau, P, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Hui, R, El Bakkouri, M, Structural Genomics Consortium (SGC)
Deposit date:2013-06-24
Release date:2013-07-24
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Crystal Structure of CpSET8 from Cryptosporidium, cgd4_370
To be Published
6H5G
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BU of 6h5g by Molmil
Crystal structure of DHQ1 from Salmonella typhi covalently modified by ligand 3
Descriptor: (1~{R},3~{S},4~{R},5~{R})-3-methyl-4,5-bis(hydroxyl)cyclohexane-1-carboxylic acid, 3-dehydroquinate dehydratase
Authors:Sanz-Gaitero, M, Maneiro, M, Lence, E, Otero, J.M, Thompson, P, Hawkins, A.R, Gonzalez-Bello, C, van Raaij, M.J.
Deposit date:2018-07-24
Release date:2019-07-24
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.04 Å)
Cite:Hydroxylammonium Derivatives for Selective Active-site Lysine Modification in the Anti-virulence Bacterial Target DHQ1 Enzyme.
Org Chem Front, 6, 2019

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数据于2024-10-16公开中

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