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PDB: 45955 results

3ZJN
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BU of 3zjn by Molmil
M.acetivorans protoglobin in complex with cyanide
Descriptor: CYANIDE ION, GLYCEROL, PHOSPHATE ION, ...
Authors:Pesce, A, Tilleman, L, Donne, J, Aste, E, Ascenzi, P, Ciaccio, C, Coletta, M, Moens, L, Viappiani, C, Dewilde, S, Bolognesi, M, Nardini, M.
Deposit date:2013-01-18
Release date:2013-06-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure and Haem-Distal Site Plasticity in Methanosarcina Acetivorans Protoglobin.
Plos One, 8, 2013
1D0U
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BU of 1d0u by Molmil
SOLUTION STRUCTURE OF AN RNA BINDING SITE FOR PHAGE MS2 COAT PROTEIN
Descriptor: PHAGE MS2 RNA BINDING SITE
Authors:Smith, J.S, Nikonowicz, E.P.
Deposit date:1999-09-14
Release date:2000-05-24
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Phosphorothioate substitution can substantially alter RNA conformation.
Biochemistry, 39, 2000
1JAQ
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BU of 1jaq by Molmil
COMPLEX OF 1-HYDROXYLAMINE-2-ISOBUTYLMALONYL-ALA-GLY-NH2 WITH THE CATALYTIC DOMAIN OF MATRIX METALLO PROTEINASE-8 (MET80 FORM)
Descriptor: CALCIUM ION, MATRIX METALLO PROTEINASE-8 (MET80 FORM), N-[(2R)-2-(hydroxycarbamoyl)-4-methylpentanoyl]-L-alanylglycinamide, ...
Authors:Grams, F, Reinemer, P, Powers, J.C, Kleine, T, Piper, M, Tschesche, H, Huber, R, Bode, W.
Deposit date:1996-03-11
Release date:1996-07-11
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:X-ray structures of human neutrophil collagenase complexed with peptide hydroxamate and peptide thiol inhibitors. Implications for substrate binding and rational drug design.
Eur.J.Biochem., 228, 1995
5T72
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BU of 5t72 by Molmil
Human carboanhydrase F131C_C206S double mutant in complex with 2
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4-(HYDROXYMERCURY)BENZOIC ACID, 4-[(E)-(4-aminophenyl)diazenyl]benzenesulfonamide, ...
Authors:DuBay, K.H, Iwan, K, Osorio-Planes, L, Geissler, P, Groll, M, Trauner, D, Broichhagen, J.
Deposit date:2016-09-02
Release date:2017-09-06
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:A Predictive Approach for the Optical Control of Carbonic Anhydrase II Activity.
ACS Chem. Biol., 13, 2018
6GVG
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BU of 6gvg by Molmil
Crystal structure of PI3K alpha in complex with 3-(2-Amino-benzooxazol-5-yl)-1-isopropyl-4-methyl-1H-pyrazolo[3,4-d]pyrimidin-6-ylamine
Descriptor: 5-(6-azanyl-4-methyl-1-propan-2-yl-pyrazolo[3,4-d]pyrimidin-3-yl)-1,3-benzoxazol-2-amine, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform
Authors:Ouvry, G, Aurelly, M, Bonnary, L, Borde, E, Bouix-Peter, C, Chantalat, L, Clary, L, Defoin-Platel, C, Deret, S, Forissier, M, Harris, C.S, Isabet, T, Lamy, L, Luzy, A.P, Pascau, J, Soulet, C, Taddei, A, Taquet, N, Tomas, L, Thoreau, E, Varvier, E, Vial, E, Hennequin, L.F.
Deposit date:2018-06-21
Release date:2019-10-02
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (3 Å)
Cite:Impact of Minor Structural Modifications on Properties of a Series of mTOR Inhibitors.
Acs Med.Chem.Lett., 10, 2019
3ZBS
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BU of 3zbs by Molmil
Catalytic domain of mouse 2',3'-cyclic nucleotide 3'- phosphodiesterase, with mutation V321A, crystallized with 2'-AMPS
Descriptor: 2', 3'-CYCLIC NUCLEOTIDE 3'-PHOSPHODIESTERASE, 2'-O-(sulfidophosphinato)adenosine, ...
Authors:Myllykoski, M, Raasakka, A, Lehtimaki, M, Han, H, Kursula, P.
Deposit date:2012-11-13
Release date:2013-07-10
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystallographic Analysis of the Reaction Cycle of 2',3'-Cyclic Nucleotide 3'-Phosphodiesterase, a Unique Member of the 2H Phosphoesterase Family
J.Mol.Biol., 425, 2013
3F34
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BU of 3f34 by Molmil
Apoferritin: complex with 2,6-diethylphenol
Descriptor: 2,6-diethylphenol, ACETATE ION, CADMIUM ION, ...
Authors:Vedula, L.S, Economou, N.J, Rossi, M.J, Eckenhoff, R.G, Loll, P.J.
Deposit date:2008-10-30
Release date:2009-07-14
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:A unitary anesthetic binding site at high resolution.
J.Biol.Chem., 284, 2009
6FMB
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BU of 6fmb by Molmil
Crystal structure of the BEC1054 RNase-like effector from the fungal pathogen Blumeria graminis
Descriptor: CSEP0064 putative effector protein
Authors:Jones, R, Garnett, J, Spanu, P.D, Cota, E.
Deposit date:2018-01-30
Release date:2018-06-20
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structure of the BEC1054 RNase-like effector from the fungal pathogen Blumeria graminis
Biorxiv, 2018
3ZEA
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BU of 3zea by Molmil
3D structure of the NiFeSe hydrogenase from D. vulgaris Hildenborough in the reduced state at 1.82 Angstroms
Descriptor: CARBONMONOXIDE-(DICYANO) IRON, FE (II) ION, HYDROSULFURIC ACID, ...
Authors:Marques, M.C, Coelho, R, Pereira, I.A.C, Matias, P.M.
Deposit date:2012-12-03
Release date:2013-06-12
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Redox State-Dependent Changes in the Crystal Structure of [Nifese] Hydrogenase from Desulfovibrio Vulgaris Hildenborough
Int.J.Hydrogen Energy, 38, 2013
6AX9
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BU of 6ax9 by Molmil
F95N Epi-isozizaene synthase
Descriptor: Epi-isozizaene synthase, MAGNESIUM ION, N-benzyl-N,N-diethylethanaminium, ...
Authors:Blank, P.N, Barrow, G.H, Christianson, D.W.
Deposit date:2017-09-06
Release date:2017-10-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.403 Å)
Cite:Substitution of Aromatic Residues with Polar Residues in the Active Site Pocket of epi-Isozizaene Synthase Leads to the Generation of New Cyclic Sesquiterpenes.
Biochemistry, 56, 2017
6FOM
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BU of 6fom by Molmil
Copper transporter OprC
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Putative copper transport outer membrane porin OprC
Authors:Bhamidimarri, S.P, van den Berg, B.
Deposit date:2018-02-07
Release date:2019-03-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Acquisition of ionic copper by the bacterial outer membrane protein OprC through a novel binding site.
Plos Biol., 19, 2021
5FGY
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BU of 5fgy by Molmil
Structure of human adenovirus 2 protease with cofactor pVIC
Descriptor: Protease, pVIC
Authors:Davis, R.R, Martinez, P, Hollis, T.
Deposit date:2015-12-21
Release date:2016-01-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of human adenovirus 2 protease with cofactor pVIC
To Be Published
5YL4
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BU of 5yl4 by Molmil
CRYSTAL STRUCTURE OF T2R-TTL-8WR COMPLEX
Descriptor: (3Z,6Z)-3-[(4-tert-butyl-1H-imidazol-5-yl)methylidene]-6-[[3-(phenylcarbonyl)phenyl]methylidene]piperazine-2,5-dione, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Fu, Z.Y, Li, W.B, Chu, Y.Y, Hou, Y.W, Ji, C.P.
Deposit date:2017-10-17
Release date:2017-11-15
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Design, synthesis and biological activity evaluation of plinabulin derivatives based on co-crystal structure
To Be Published
6FP9
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BU of 6fp9 by Molmil
Crystal structure of anti-mTFP1 DARPin 1238_E11
Descriptor: 1,2-ETHANEDIOL, DARPin 1238_E11, SULFATE ION
Authors:Jakob, R.P, Vigano, M.A, Bieli, D, Matsuda, S, Schaefer, J.V, Pluckthun, A, Affolter, M, Maier, T.
Deposit date:2018-02-09
Release date:2018-10-03
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:DARPins recognizing mTFP1 as novel reagents forin vitroandin vivoprotein manipulations.
Biol Open, 7, 2018
3SFI
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BU of 3sfi by Molmil
Ethionamide Boosters Part 2: Combining Bioisosteric Replacement and Structure-Based Drug Design to Solve Pharmacokinetic Issues in a Series of Potent 1,2,4-Oxadiazole EthR Inhibitors.
Descriptor: 5,5,5-trifluoro-1-{4-[3-(1,3-thiazol-2-yl)-1,2,4-oxadiazol-5-yl]piperidin-1-yl}pentan-1-one, Transcriptional regulatory repressor protein (TETR-family)
Authors:Flipo, M, Desroses, M, Lecat-Guillet, N, Villemagne, B, Blondiaux, N, Leroux, F, Piveteau, C, Mathys, V, Flament, M.P, Siepmann, J, Villeret, V, Wohlkonig, A, Wintjens, R, Soror, S.H, Christophe, T, Jeon, H.K, Locht, C, Brodin, P, D prez, B, Baulard, A.R, Willand, N.
Deposit date:2011-06-13
Release date:2011-12-07
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Ethionamide Boosters. 2. Combining Bioisosteric Replacement and Structure-Based Drug Design To Solve Pharmacokinetic Issues in a Series of Potent 1,2,4-Oxadiazole EthR Inhibitors.
J.Med.Chem., 55, 2012
2FGO
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BU of 2fgo by Molmil
Structure of the 2[4FE-4S] ferredoxin from Pseudomonas aeruginosa
Descriptor: Ferredoxin, IRON/SULFUR CLUSTER
Authors:Giastas, P, Pinotsis, N, Mavridis, I.M.
Deposit date:2005-12-22
Release date:2006-04-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:The structure of the 2[4Fe-4S] ferredoxin from Pseudomonas aeruginosa at 1.32-A resolution: comparison with other high-resolution structures of ferredoxins and contributing structural features to reduction potential values.
J.Biol.Inorg.Chem., 11, 2006
3ZJJ
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BU of 3zjj by Molmil
Phe(93)E11Leu mutation of M.acetivorans protoglobin in complex with cyanide
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CYANIDE ION, GLYCEROL, ...
Authors:Pesce, A, Tilleman, L, Donne, J, Aste, E, Ascenzi, P, Ciaccio, C, Coletta, M, Moens, L, Viappiani, C, Dewilde, S, Bolognesi, M, Nardini, M.
Deposit date:2013-01-18
Release date:2013-06-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and Haem-Distal Site Plasticity in Methanosarcina Acetivorans Protoglobin.
Plos One, 8, 2013
5FIE
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BU of 5fie by Molmil
Crystal structure of N-terminal domain of shaft pilin spaA from Lactobacillus rhamnosus GG
Descriptor: Cell surface protein SpaA, SODIUM ION
Authors:Chaurasia, P, Pratap, S, von Ossowski, I, Palva, A, Krishnan, V.
Deposit date:2015-12-23
Release date:2016-07-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:New insights about pilus formation in gut-adapted Lactobacillus rhamnosus GG from the crystal structure of the SpaA backbone-pilin subunit
Sci Rep, 6, 2016
4LCG
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BU of 4lcg by Molmil
Crystal structure of the Pseudomonas aeruginosa LPXC/LPC-050 complex
Descriptor: (betaS)-Nalpha-{4-[4-(4-aminophenyl)buta-1,3-diyn-1-yl]benzoyl}-N,beta-dihydroxy-L-tyrosinamide, NITRATE ION, UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase, ...
Authors:Lee, C.-J, Zhou, P.
Deposit date:2013-06-21
Release date:2013-08-21
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.568 Å)
Cite:Synthesis, Structure, and Antibiotic Activity of Aryl-Substituted LpxC Inhibitors.
J.Med.Chem., 56, 2013
3MJZ
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BU of 3mjz by Molmil
The crystal structure of native FG41 MSAD
Descriptor: FG41 Malonate Semialdehyde Decarboxylase
Authors:Guo, Y, Serrano, H, Poelarends, G.J, Johnson, W.H.Jr, Hackert, M.L, Whitman, C.P.
Deposit date:2010-04-13
Release date:2011-04-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Kinetic, Mutational, and Structural Analysis of Malonate Semialdehyde Decarboxylase from Coryneform Bacterium Strain FG41: Mechanistic Implications for the Decarboxylase and Hydratase Activities.
Biochemistry, 52, 2013
4KXM
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BU of 4kxm by Molmil
Crystal structure of DNPH1 (RCL) WITH N6-ISOPENTENYL-AMP
Descriptor: 2'-deoxynucleoside 5'-phosphate N-hydrolase 1, N6-ISOPENTENYL-ADENOSINE-5'-MONOPHOSPHATE
Authors:Padilla, A, Labesse, G, Kaminski, P.A.
Deposit date:2013-05-27
Release date:2014-02-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:N (6)-substituted AMPs inhibit mammalian deoxynucleotide N-hydrolase DNPH1.
Plos One, 8, 2013
6H0Z
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BU of 6h0z by Molmil
Crystal Structure of KDM4D with tetrazolylhydrazide ligand NR067
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Lysine-specific demethylase 4D, ...
Authors:Malecki, P.H, Weiss, M.S, Heinemann, U, Link, A.
Deposit date:2018-07-10
Release date:2020-01-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Crystal Structure of KDM4D with tetrazolylhydrazide ligand NR067
To be published
6FLZ
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BU of 6flz by Molmil
Structure of AcmJRL, a mannose binding jacalin related lectin from Ananas comosus, in complex with methyl-mannose.
Descriptor: CITRIC ACID, Jacalin-like lectin, methyl alpha-D-mannopyranoside
Authors:Azarkan, M, Herman, R, El Mahyaoui, R, Sauvage, E, Vanden Broeck, A, Charlier, P.
Deposit date:2018-01-29
Release date:2018-08-15
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.895 Å)
Cite:Biochemical and structural characterization of a mannose binding jacalin-related lectin with two-sugar binding sites from pineapple (Ananas comosus) stem.
Sci Rep, 8, 2018
6B5F
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BU of 6b5f by Molmil
Crystal structure of nicotinate mononucleotide-5,6-dimethylbenzimidazole phosphoribosyltransferase CobT from Yersinia enterocolitica
Descriptor: CHLORIDE ION, GLYCEROL, Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase, ...
Authors:Stogios, P.J, Skarina, T, McChesney, C, Grimshaw, T, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2017-09-29
Release date:2017-10-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of nicotinate mononucleotide-5,6-dimethylbenzimidazole phosphoribosyltransferase CobT from Yersinia enterocolitica
To Be Published
5TLW
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BU of 5tlw by Molmil
Fructose-1,6-bisphosphate aldolase from rabbit muscle in complex with the inhibitor 1-phosphate-benzene 4-bisphosphonate
Descriptor: Fructose-bisphosphate aldolase A, GLYCEROL, {[4-(phosphonooxy)phenyl]methylene}bis(phosphonic acid)
Authors:Heron, P.W, Sygusch, J.
Deposit date:2016-10-12
Release date:2017-10-25
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Bisphosphonate Inhibitors of Mammalian Glycolytic Aldolase.
J.Med.Chem., 61, 2018

224004

数据于2024-08-21公开中

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