Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 45955 results

2FQ0
DownloadVisualize
BU of 2fq0 by Molmil
Solution structure of major conformation of holo-acyl carrier protein from malaria parasite plasmodium falciparum
Descriptor: 4'-PHOSPHOPANTETHEINE, acyl carrier protein
Authors:Sharma, A.K, Sharma, S.K, Surolia, A, Surolia, N, Sarma, S.P.
Deposit date:2006-01-17
Release date:2006-08-08
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structures of conformationally equilibrium forms of holo-acyl carrier protein (PfACP) from Plasmodium falciparum provides insight into the mechanism of activation of ACPs
Biochemistry, 45, 2006
6EJJ
DownloadVisualize
BU of 6ejj by Molmil
Structure of a glycosyltransferase / state 2
Descriptor: 2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-alpha-D-glucopyranose, CHLORIDE ION, NerylNeryl pyrophosphate, ...
Authors:Ramirez, A.S, Boilevin, J, Mehdipour, A.R, Hummer, G, Darbre, T, Reymond, J.L, Locher, K.P.
Deposit date:2017-09-21
Release date:2018-02-07
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis of the molecular ruler mechanism of a bacterial glycosyltransferase.
Nat Commun, 9, 2018
6EK6
DownloadVisualize
BU of 6ek6 by Molmil
Crystal structure of KDM5B in complex with S49195a.
Descriptor: 1,2-ETHANEDIOL, DIMETHYL SULFOXIDE, Lysine-specific demethylase 5B,Lysine-specific demethylase 5B, ...
Authors:Srikannathasan, V, Szykowska, A, Newman, J.A, Ruda, G.F, Strain-Damerell, C, Burgess-Brown, N.A, Vazquez-Rodriguez, S, Wright, M, Brennan, P.E, Arrowsmith, C.H, Edwards, A, Bountra, C, Oppermann, U, Huber, K, von Delft, F.
Deposit date:2017-09-25
Release date:2018-03-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure of KDM5B in complex with S49195a.
To be published
5XM3
DownloadVisualize
BU of 5xm3 by Molmil
Crystal Structure of Methanol dehydrogenase from Methylophaga aminisulfidivorans
Descriptor: Glucose dehydrogenase, MAGNESIUM ION, Methanol dehydrogenase [cytochrome c] subunit 2, ...
Authors:Cao, T.P, Choi, J.M, Lee, S.H.
Deposit date:2017-05-12
Release date:2018-03-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.701 Å)
Cite:The crystal structure of methanol dehydrogenase, a quinoprotein from the marine methylotrophic bacterium Methylophaga aminisulfidivorans MPT
J. Microbiol., 56, 2018
5XN5
DownloadVisualize
BU of 5xn5 by Molmil
Homo-dimer crystal structure of geranylgeranyl diphosphate synthases 1 from Oryza sativa
Descriptor: Os07g0580900 protein
Authors:Wang, C, Zhou, F, Lu, S, Zhang, P.
Deposit date:2017-05-18
Release date:2017-06-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:A recruiting protein of geranylgeranyl diphosphate synthase controls metabolic flux toward chlorophyll biosynthesis in rice
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
1EGQ
DownloadVisualize
BU of 1egq by Molmil
ENHANCEMENT OF ENZYME ACTIVITY THROUGH THREE-PHASE PARTITIONING: CRYSTAL STRUCTURE OF A MODIFIED SERINE PROTEINASE AT 1.5 A RESOLUTION
Descriptor: ACETIC ACID, CALCIUM ION, PROTEINASE K
Authors:Singh, R.K, Gourinath, S, Sharma, S, Ray, I, Gupta, M.N, Singh, T.P.
Deposit date:2000-02-16
Release date:2001-02-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Enhancement of enzyme activity through three-phase partitioning: crystal structure of a modified serine proteinase at 1.5 A resolution.
Protein Eng., 14, 2001
2RGH
DownloadVisualize
BU of 2rgh by Molmil
Structure of Alpha-Glycerophosphate Oxidase from Streptococcus sp.: A Template for the Mitochondrial Alpha-Glycerophosphate Dehydrogenase
Descriptor: Alpha-Glycerophosphate Oxidase, FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION
Authors:Colussi, T, Boles, W, Mallett, T.C, Karplus, P.A, Claiborne, A.
Deposit date:2007-10-01
Release date:2008-01-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of alpha-glycerophosphate oxidase from Streptococcus sp.: a template for the mitochondrial alpha-glycerophosphate dehydrogenase.
Biochemistry, 47, 2008
6EQG
DownloadVisualize
BU of 6eqg by Molmil
Crystal structure of a polyethylene terephthalate degrading hydrolase from Ideonella sakaiensis in spacegroup P21
Descriptor: CHLORIDE ION, Poly(ethylene terephthalate) hydrolase, SULFATE ION
Authors:Austin, H.P, Allen, M.D, Johnson, C.W, Beckham, G.T, McGeehan, J.E.
Deposit date:2017-10-12
Release date:2018-04-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.799 Å)
Cite:Characterization and engineering of a plastic-degrading aromatic polyesterase.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
2RH4
DownloadVisualize
BU of 2rh4 by Molmil
Actinorhodin ketoreductase, actKR, with NADPH and Inhibitor Emodin
Descriptor: 3-METHYL-1,6,8-TRIHYDROXYANTHRAQUINONE, Actinorhodin Polyketide Ketoreductase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Korman, T.P, Tsai, S.-C.
Deposit date:2007-10-05
Release date:2008-08-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Inhibition kinetics and emodin cocrystal structure of a type II polyketide ketoreductase
Biochemistry, 47, 2008
2IUT
DownloadVisualize
BU of 2iut by Molmil
P. aeruginosa FtsK motor domain, dimeric
Descriptor: DNA TRANSLOCASE FTSK, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
Authors:Massey, T.H, Mercogliano, C.P, Yates, J, Sherratt, D.J, Lowe, J.
Deposit date:2006-06-07
Release date:2006-08-29
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Double-Stranded DNA Translocation: Structure and Mechanism of Hexameric Ftsk
Mol.Cell, 23, 2006
1QZE
DownloadVisualize
BU of 1qze by Molmil
HHR23a protein structure based on residual dipolar coupling data
Descriptor: UV excision repair protein RAD23 homolog A
Authors:Walters, K.J, Lech, P.J, Goh, A.M, Wang, Q, Howley, P.M.
Deposit date:2003-09-16
Release date:2003-10-21
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:DNA-repair protein hHR23a alters its protein structure upon binding proteasomal subunit S5a
Proc.Natl.Acad.Sci.USA, 100, 2003
2RHC
DownloadVisualize
BU of 2rhc by Molmil
Actinorhodin ketordeuctase, actKR, with NADP+ and Inhibitor Emodin
Descriptor: 3-METHYL-1,6,8-TRIHYDROXYANTHRAQUINONE, Actinorhodin Polyketide Ketoreductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Korman, T.P, Tsai, S.-C.
Deposit date:2007-10-08
Release date:2008-08-19
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Inhibition kinetics and emodin cocrystal structure of a type II polyketide ketoreductase
Biochemistry, 47, 2008
6E5T
DownloadVisualize
BU of 6e5t by Molmil
Crystal structure of human cellular retinol binding protein 1 in complex with abnormal-cannabidiorcin (Abn-CBDO)
Descriptor: (1'R,2'R)-5',6-dimethyl-2'-(prop-1-en-2-yl)-1',2',3',4'-tetrahydro[1,1'-biphenyl]-2,4-diol, Retinol-binding protein 1
Authors:Silvaroli, J.A, Horwitz, S, Banerjee, S, Kiser, P.D, Golczak, M.
Deposit date:2018-07-23
Release date:2019-02-13
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Abnormal Cannabidiol Modulates Vitamin A Metabolism by Acting as a Competitive Inhibitor of CRBP1.
Acs Chem.Biol., 14, 2019
5XPK
DownloadVisualize
BU of 5xpk by Molmil
Crystal structure of ubiquitin-k6mimic
Descriptor: D-ubiquitin, Ubiquitin
Authors:Man, P, Shuai, G, Qian, Q, Lei, L.
Deposit date:2017-06-03
Release date:2017-07-19
Method:X-RAY DIFFRACTION (2.274 Å)
Cite:Structure of ubiquitin-k6mimic at 2.27 Angstroms resolution.
To Be Published
1EL6
DownloadVisualize
BU of 1el6 by Molmil
STRUCTURE OF BACTERIOPHAGE T4 GENE PRODUCT 11, THE INTERFACE BETWEEN THE BASEPLATE AND SHORT TAIL FIBERS
Descriptor: BASEPLATE STRUCTURAL PROTEIN GP11
Authors:Leiman, P.G, Kostyuchenko, V.A, Schneider, M.M, Kurochkina, L.P, Mesyanzhinov, V.V, Rossmann, M.G.
Deposit date:2000-03-13
Release date:2000-04-05
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of bacteriophage T4 gene product 11, the interface between the baseplate and short tail fibers.
J.Mol.Biol., 301, 2000
5EB8
DownloadVisualize
BU of 5eb8 by Molmil
Crystal structure of aromatic mutant (F4W) of an alkali thermostable GH10 xylanase from Bacillus sp. NG-27
Descriptor: Beta-xylanase, MAGNESIUM ION, SODIUM ION
Authors:Mahanta, P, Bhardwaj, A, Reddy, V.S, Ramakumar, S.
Deposit date:2015-10-18
Release date:2016-10-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Crystal structure of aromatic mutant (F4W) of an alkali thermostable GH10 xylanase from Bacillus sp. NG-27
To Be Published
2INN
DownloadVisualize
BU of 2inn by Molmil
Structure of the Phenol Hydroxyalse-Regulatory Protein Complex
Descriptor: FE (III) ION, MOLYBDATE ION, Phenol hydroxylase component phL, ...
Authors:Sazinsky, M.H, Dunten, P.W, McCormick, M.S, Lippard, S.J.
Deposit date:2006-10-08
Release date:2007-01-16
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:X-ray Structure of a Hydroxylase-Regulatory Protein Complex from a Hydrocarbon-Oxidizing Multicomponent Monooxygenase, Pseudomonas sp. OX1 Phenol Hydroxylase.
Biochemistry, 45, 2006
5ED6
DownloadVisualize
BU of 5ed6 by Molmil
crystal structure of human Hint1 H114A mutant complexing with ATP
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ADENOSINE MONOPHOSPHATE, Histidine triad nucleotide-binding protein 1
Authors:Wang, J, Fang, P, Guo, M.
Deposit date:2015-10-20
Release date:2017-01-25
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Second messenger Ap4A polymerizes target protein HINT1 to transduce signals in Fc epsilon RI-activated mast cells.
Nat Commun, 10, 2019
2IPO
DownloadVisualize
BU of 2ipo by Molmil
E. coli Aspartate Transcarbamoylase complexed with N-phosphonacetyl-L-asparagine
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Aspartate carbamoyltransferase catalytic chain, Aspartate carbamoyltransferase regulatory chain, ...
Authors:Cardia, J.P, Eldo, J, Xia, J, O'Day, E.M, Tsuruta, H, Kantrowitz, E.R.
Deposit date:2006-10-12
Release date:2007-08-28
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Use of L-asparagine and N-phosphonacetyl-L-asparagine to investigate the linkage of catalysis and homotropic cooperativity in E. coli aspartate transcarbomoylase.
Proteins, 71, 2008
6I7X
DownloadVisualize
BU of 6i7x by Molmil
Crystal Structure of the first bromodomain of BRD4 in complex with RT53
Descriptor: 1,2-ETHANEDIOL, 2-[(4~{S})-6-(4-chlorophenyl)-8-methoxy-1-methyl-4~{H}-[1,2,4]triazolo[4,3-a][1,4]benzodiazepin-4-yl]-1-[4-(dimethylamino)piperidin-1-yl]ethanone, Bromodomain-containing protein 4
Authors:Picaud, S, Traquete, R, Bernardes, G.J.L, Newman, J, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Filippakopoulos, P, Structural Genomics Consortium (SGC)
Deposit date:2018-11-19
Release date:2019-11-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Crystal Structure of the first bromodomain of BRD4 in complex with RT53
To Be Published
4LG1
DownloadVisualize
BU of 4lg1 by Molmil
Human Methyltransferase-Like Protein 21D
Descriptor: 1,2-ETHANEDIOL, Protein-lysine methyltransferase METTL21D, S-ADENOSYLMETHIONINE, ...
Authors:Dong, A, Zeng, H, Fenner, M, Tempel, W, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Brown, P.J, Wu, H, Structural Genomics Consortium (SGC)
Deposit date:2013-06-27
Release date:2013-07-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The Crystal Structure of Human Methyltransferase-Like Protein 21D in Complex with SAM
To be Published
5XTR
DownloadVisualize
BU of 5xtr by Molmil
Crystal structure of baculoviral sulfhydryl oxidase P33 (R127A, E183A mutant)
Descriptor: FAD-linked sulfhydryl oxidase, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Kuang, W, Hu, Z, Gong, P.
Deposit date:2017-06-20
Release date:2017-09-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Three Conserved Regions in Baculovirus Sulfhydryl Oxidase P33 Are Critical for Enzymatic Activity and Function
J. Virol., 91, 2017
6E6S
DownloadVisualize
BU of 6e6s by Molmil
1.45 A resolution structure of the C-terminally truncated [2Fe-2S] ferredoxin (Bfd) R26E/K46Y mutant from Pseudomonas aeruginosa
Descriptor: Bacterioferritin-associated ferredoxin, FE2/S2 (INORGANIC) CLUSTER
Authors:Lovell, S, Wijerathne, H, Battaile, K.P, Yao, H, Wang, Y, Rivera, M.
Deposit date:2018-07-25
Release date:2018-09-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Bfd, a New Class of [2Fe-2S] Protein That Functions in Bacterial Iron Homeostasis, Requires a Structural Anion Binding Site.
Biochemistry, 57, 2018
4KU0
DownloadVisualize
BU of 4ku0 by Molmil
Enterobacteria phage T4 gp5.4 PAAR repeat protein in complex with T4 gp5 beta-helix fragment
Descriptor: 1,2-ETHANEDIOL, 9-OCTADECENOIC ACID, FE (III) ION, ...
Authors:Buth, S.A, Leiman, P.G, Shneider, M.M.
Deposit date:2013-05-21
Release date:2014-05-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Crystall structute of the business end of the T4 cell-puncturing device
To be Published
7YMW
DownloadVisualize
BU of 7ymw by Molmil
Cryo-EM structure of MERS-CoV spike protein, One RBD-up conformation 4
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Hsu, S.T.D, Chang, N.E, Weng, Z.W, Yang, T.J, Draczkowski, P.
Deposit date:2022-07-29
Release date:2023-08-09
Method:ELECTRON MICROSCOPY (6.05 Å)
Cite:GlycoSHIELD: a versatile pipeline to assess glycan impact on protein structures
To Be Published

224004

数据于2024-08-21公开中

PDB statisticsPDBj update infoContact PDBjnumon