Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 45955 results

6IDS
DownloadVisualize
BU of 6ids by Molmil
Crystal structure of Vibrio cholerae MATE transporter VcmN D35N mutant
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, MATE family efflux transporter
Authors:Kusakizako, T, Claxton, D.P, Tanaka, Y, Maturana, A.D, Kuroda, T, Ishitani, R, Mchaourab, H.S, Nureki, O.
Deposit date:2018-09-11
Release date:2019-01-16
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Structural Basis of H+-Dependent Conformational Change in a Bacterial MATE Transporter.
Structure, 27, 2019
2FP7
DownloadVisualize
BU of 2fp7 by Molmil
West Nile Virus NS2B/NS3protease in complex with Bz-Nle-Lys-Arg-Arg-H
Descriptor: Genome polyprotein, N-benzoyl-L-norleucyl-L-lysyl-N-[(2S)-5-carbamimidamido-1-hydroxypentan-2-yl]-L-argininamide
Authors:Schiering, N, D'Arcy, A, Erbel, P.
Deposit date:2006-01-16
Release date:2006-03-07
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Structural basis for the activation of flaviviral NS3 proteases from dengue and West Nile virus.
Nat.Struct.Mol.Biol., 13, 2006
1R81
DownloadVisualize
BU of 1r81 by Molmil
Glycosyltransferase A in complex with 3-amino-acceptor analog inhibitor and uridine diphosphate-N-acetyl-galactose
Descriptor: Glycoprotein-fucosylgalactoside alpha-N-acetylgalactosaminyltransferase, MERCURY (II) ION, URIDINE-DIPHOSPHATE-N-ACETYLGALACTOSAMINE, ...
Authors:Nguyen, H.P, Seto, N.O.L, Cai, Y, Leinala, E.K, Borisova, S.N, Palcic, M.M, Evans, S.V.
Deposit date:2003-10-22
Release date:2004-02-10
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The influence of an intramolecular hydrogen bond in differential recognition of inhibitory acceptor analogs by human ABO(H) blood group A and B glycosyltransferases
J.Biol.Chem., 278, 2003
3RYG
DownloadVisualize
BU of 3ryg by Molmil
128 hours neutron structure of perdeuterated rubredoxin
Descriptor: FE (III) ION, Rubredoxin
Authors:Munshi, P, Chung, C.-L, Weiss, K.L, Blakeley, M.P, Myles, D.A.A, Meilleur, F.
Deposit date:2011-05-11
Release date:2011-12-28
Last modified:2023-09-13
Method:NEUTRON DIFFRACTION (1.75 Å)
Cite:Rapid visualization of hydrogen positions in protein neutron crystallographic structures.
Acta Crystallogr.,Sect.D, 68, 2012
1R8O
DownloadVisualize
BU of 1r8o by Molmil
Crystal structure of an unusual Kunitz-type trypsin inhibitor from Copaifera langsdorffii seeds
Descriptor: Kunitz trypsin inhibitor
Authors:Krauchenco, S, Nagem, R.A.P, da Silva, J.A, Marangoni, S, Polikarpov, I.
Deposit date:2003-10-27
Release date:2004-05-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Three-dimensional structure of an unusual Kunitz (STI) type trypsin inhibitor from Copaifera langsdorffii.
Biochimie, 86, 2004
6E18
DownloadVisualize
BU of 6e18 by Molmil
Crystal structure of Chlamydomonas reinhardtii HAP2 ectodomain provides structural insights of functional loops in green algae.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
Authors:Baquero, E, Legrand, P, Rey, F.A.
Deposit date:2018-07-09
Release date:2018-11-07
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Species-Specific Functional Regions of the Green Alga Gamete Fusion Protein HAP2 Revealed by Structural Studies.
Structure, 27, 2019
1RAV
DownloadVisualize
BU of 1rav by Molmil
RECOMBINANT AVIDIN
Descriptor: AVIDIN
Authors:Rosano, C, Arosio, P, Bolognesi, M.
Deposit date:1998-03-27
Release date:1998-07-15
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Biochemical characterization and crystal structure of a recombinant hen avidin and its acidic mutant expressed in Escherichia coli.
Eur.J.Biochem., 256, 1998
5XTO
DownloadVisualize
BU of 5xto by Molmil
Crystal structure of baculoviral sulfhydryl oxidase P33 (H114A mutant)
Descriptor: FAD-linked sulfhydryl oxidase, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Kuang, W, Hu, Z, Gong, P.
Deposit date:2017-06-20
Release date:2017-09-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:Three Conserved Regions in Baculovirus Sulfhydryl Oxidase P33 Are Critical for Enzymatic Activity and Function
J. Virol., 91, 2017
5E7B
DownloadVisualize
BU of 5e7b by Molmil
Structure of a nanobody (vHH) from camel against phage Tuc2009 RBP (BppL, ORF53)
Descriptor: nanobody nano-L06
Authors:Legrand, P, Collins, B, Blangy, S, Murphy, J, Spinelli, S, Gutierrez, C, Richet, N, Kellenberger, C, Desmyter, A, Mahony, J, van Sinderen, D, Cambillau, C.
Deposit date:2015-10-12
Release date:2015-12-30
Last modified:2016-05-04
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:The Atomic Structure of the Phage Tuc2009 Baseplate Tripod Suggests that Host Recognition Involves Two Different Carbohydrate Binding Modules.
Mbio, 7, 2016
1IHU
DownloadVisualize
BU of 1ihu by Molmil
CRYSTAL STRUCTURE OF THE ESCHERICHIA COLI ARSENITE-TRANSLOCATING ATPASE IN COMPLEX WITH MG-ADP-ALF3
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, ARSENICAL PUMP-DRIVING ATPASE, ...
Authors:Zhou, T, Radaev, S, Rosen, B.P, Gatti, D.L.
Deposit date:2001-04-20
Release date:2001-09-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Conformational changes in four regions of the Escherichia coli ArsA ATPase link ATP hydrolysis to ion translocation.
J.Biol.Chem., 276, 2001
3LVP
DownloadVisualize
BU of 3lvp by Molmil
Crystal structure of bisphosphorylated IGF1-R Kinase domain (2P) in complex with a bis-azaindole inhibitor
Descriptor: 3-(4-chloro-1H-pyrrolo[2,3-b]pyridin-2-yl)-5,6-dimethoxy-1-methyl-1H-pyrrolo[3,2-b]pyridine, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Insulin-like growth factor 1 receptor, ...
Authors:Maignan, S, Marquette, J.P, Guilloteau, J.P.
Deposit date:2010-02-22
Release date:2010-07-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3 Å)
Cite:Design of Potent IGF1-R Inhibitors Related to Bis-azaindoles
Chem.Biol.Drug Des., 76, 2010
5DW7
DownloadVisualize
BU of 5dw7 by Molmil
Crystal structure of the unliganded geosmin synthase N-terminal domain from Streptomyces coelicolor
Descriptor: Germacradienol/geosmin synthase
Authors:Lombardi, P.M, Harris, G.G, Pemberton, T.A, Matsui, T, Weiss, T.M, Cole, K.E, Koksal, M, Murphy, F.V, Vedula, L.S, Chou, W.K, Cane, D.E, Christianson, D.W.
Deposit date:2015-09-22
Release date:2015-11-25
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.202 Å)
Cite:Structural Studies of Geosmin Synthase, a Bifunctional Sesquiterpene Synthase with alpha alpha Domain Architecture That Catalyzes a Unique Cyclization-Fragmentation Reaction Sequence.
Biochemistry, 54, 2015
5XCK
DownloadVisualize
BU of 5xck by Molmil
Crystal structure of Vps29 double mutant (D62A/H86A) from Entamoeba histolytica
Descriptor: Vacuolar protein sorting-associated protein 29
Authors:Srivastava, V.K, Yadav, R, Tomar, P, Gourinath, S, Datta, S.
Deposit date:2017-03-22
Release date:2017-10-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and thermodynamic characterization of metal binding in Vps29 from Entamoeba histolytica: implication in retromer function.
Mol. Microbiol., 106, 2017
1RLI
DownloadVisualize
BU of 1rli by Molmil
The Structure of Trp Repressor Binding Protein from Bacillus subtilis
Descriptor: PHOSPHATE ION, PLATINUM (II) ION, Trp Repressor Binding Protein
Authors:Kim, Y, Quartey, P, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2003-11-25
Release date:2004-04-13
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure analysis of trp repressor binding protein from Bacillus subtilis
To be Published
5XWA
DownloadVisualize
BU of 5xwa by Molmil
Crystal Structure of Porcine pancreatic trypsin with tripeptide inhibitor, PRY, at pH 10
Descriptor: Acetylated-Pro-Arg-Tyr Inhibitor, CALCIUM ION, Trypsin
Authors:Saikhedkar, N.S, Bhoite, A.S, Giri, A.P, Kulkarni, K.A.
Deposit date:2017-06-29
Release date:2018-03-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Tripeptides derived from reactive centre loop of potato type II protease inhibitors preferentially inhibit midgut proteases of Helicoverpa armigera.
Insect Biochem. Mol. Biol., 95, 2018
4KXX
DownloadVisualize
BU of 4kxx by Molmil
Human transketolase in covalent complex with donor ketose D-sedoheptulose-7-phosphate
Descriptor: (2R,3R,4S,5R,6S)-2,3,4,5,6,7-hexahydroxyheptyl dihydrogen phosphate, 1,2-ETHANEDIOL, MAGNESIUM ION, ...
Authors:Neumann, P, Luedtke, S, Ficner, R, Tittmann, K.
Deposit date:2013-05-28
Release date:2013-08-21
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.03 Å)
Cite:Sub-angstrom-resolution crystallography reveals physical distortions that enhance reactivity of a covalent enzymatic intermediate.
Nat Chem, 5, 2013
2FVL
DownloadVisualize
BU of 2fvl by Molmil
Crystal structure of human 3-alpha hydroxysteroid/dihydrodiol dehydrogenase (AKR1C4) complexed with NADP+
Descriptor: Aldo-keto reductase family 1, member C4, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Ugochukwu, E, Smee, C, Guo, K, Lukacik, P, Kavanagh, K, Debreczeni, J.E, von Delft, F, Weigelt, J, Sundstrom, M, Arrowsmith, C, Edwards, A, Oppermann, U, Structural Genomics Consortium (SGC)
Deposit date:2006-01-31
Release date:2006-02-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of human 3-alpha hydroxysteroid/dihydrodiol dehydrogenase (AKR1C4) complexed with NADP+
To be Published
3S8H
DownloadVisualize
BU of 3s8h by Molmil
Structure of dihydrodipicolinate synthase complexed with 3-Hydroxypropanoic acid(HPA)at 2.70 A resolution
Descriptor: 3-HYDROXY-PROPANOIC ACID, Dihydrodipicolinate synthase
Authors:Kumar, M, Kaur, N, Kumar, S, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2011-05-28
Release date:2011-06-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of dihydrodipicolinate synthase complexed with 3-Hydroxypropanoic acid(HPA)at 2.70 A resolution
TO BE PUBLISHED
6IGP
DownloadVisualize
BU of 6igp by Molmil
Crystal structure of S9 peptidase (inactive state)from Deinococcus radiodurans R1 in P212121
Descriptor: Acyl-peptide hydrolase, putative, GLYCEROL
Authors:Yadav, P, Goyal, V.D, Kumar, A, Makde, R.D.
Deposit date:2018-09-25
Release date:2018-11-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Carboxypeptidase in prolyl oligopeptidase family: Unique enzyme activation and substrate-screening mechanisms.
J.Biol.Chem., 294, 2019
3LTV
DownloadVisualize
BU of 3ltv by Molmil
Mouse-human sod1 chimera
Descriptor: Superoxide dismutase [Cu-Zn],Superoxide dismutase [Cu-Zn], ZINC ION
Authors:Seetharaman, S.V, Taylor, A.B, Hart, P.J.
Deposit date:2010-02-16
Release date:2010-09-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.453 Å)
Cite:Structures of mouse SOD1 and human/mouse SOD1 chimeras.
Arch.Biochem.Biophys., 503, 2010
6EGS
DownloadVisualize
BU of 6egs by Molmil
Crystal structure of the GalNAc-T2 F104S mutant in complex with UDP-GalNAc
Descriptor: MANGANESE (II) ION, Polypeptide N-acetylgalactosaminyltransferase 2, URIDINE-DIPHOSPHATE-N-ACETYLGALACTOSAMINE
Authors:de las Rivas, M, Coelho, H, Diniz, A, Lira-Navarrete, E, Jimenez-Barbero, J, Schjoldager, K.T, Bennett, E.P, Vakhrushev, S.Y, Clausen, H, Corzana, F, Marcelo, F, Hurtado-Guerrero, R.
Deposit date:2017-09-12
Release date:2018-04-11
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural Analysis of a GalNAc-T2 Mutant Reveals an Induced-Fit Catalytic Mechanism for GalNAc-Ts.
Chemistry, 24, 2018
5E1W
DownloadVisualize
BU of 5e1w by Molmil
Crystal structure of the organohalide sensing RdhR-CbdbA1625 transcriptional regulator in the ligand free form
Descriptor: Transcriptional regulator, MarR family
Authors:Quezada, C.P, Dunstan, M.S, Fisher, K, Leys, D.
Deposit date:2015-09-30
Release date:2016-10-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.392 Å)
Cite:Crystal structures of RdhRCbdbA1625 provide insight into sensing of chloroaromatic compounds by MarR-type regulators
to be published
1R1H
DownloadVisualize
BU of 1r1h by Molmil
STRUCTURAL ANALYSIS OF NEPRILYSIN WITH VARIOUS SPECIFIC AND POTENT INHIBITORS
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, N-[3-[(1-AMINOETHYL)(HYDROXY)PHOSPHORYL]-2-(1,1'-BIPHENYL-4-YLMETHYL)PROPANOYL]ALANINE, Neprilysin, ...
Authors:Oefner, C, Roques, B.P, Fournie-Zaluski, M.C, Dale, G.E.
Deposit date:2003-09-24
Release date:2004-09-28
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural analysis of neprilysin with various specific and potent inhibitors.
Acta Crystallogr.,Sect.D, 60, 2004
1ESQ
DownloadVisualize
BU of 1esq by Molmil
CRYSTAL STRUCTURE OF THIAZOLE KINASE MUTANT (C198S) WITH ATP AND THIAZOLE PHOSPHATE.
Descriptor: 4-METHYL-5-HYDROXYETHYLTHIAZOLE PHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, HYDROXYETHYLTHIAZOLE KINASE, ...
Authors:Campobasso, N, Mathews, I.I, Begley, T.P, Ealick, S.E.
Deposit date:2000-04-10
Release date:2000-08-09
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of 4-methyl-5-beta-hydroxyethylthiazole kinase from Bacillus subtilis at 1.5 A resolution.
Biochemistry, 39, 2000
6AAA
DownloadVisualize
BU of 6aaa by Molmil
Structure of a blue-shifted Luciferase from Amydetes vivianii
Descriptor: Blue-shifted Luciferase, GLYCEROL
Authors:Carrasco-Lopez, C, Naumov, P, Rabeh, W.
Deposit date:2018-07-18
Release date:2018-08-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Beetle luciferases with naturally red- and blue-shifted emission.
Life Sci Alliance, 1, 2018

224004

数据于2024-08-21公开中

PDB statisticsPDBj update infoContact PDBjnumon