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PDB: 45788 results

2EFN
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Crystal Structure of Ser 32 to Ala of ST1022 from Sulfolobus tokodaii 7
Descriptor: 150aa long hypothetical transcriptional regulator, MAGNESIUM ION
Authors:Kumarevel, T.S, Karthe, P, Nakano, N, Shinkai, A, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-23
Release date:2008-02-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Crystal structure of glutamine receptor protein from Sulfolobus tokodaii strain 7 in complex with its effector L-glutamine: implications of effector binding in molecular association and DNA binding.
Nucleic Acids Res., 36, 2008
2EFP
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Crystal Structure of Tyr77 to Ala of ST1022-Glutamine Complex from Sulolobus tokodaii 7
Descriptor: 150aa long hypothetical transcriptional regulator, GLUTAMINE, MAGNESIUM ION
Authors:Kumarevel, T.S, Karthe, P, Nakano, N, Shinkai, A, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-23
Release date:2008-02-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of glutamine receptor protein from Sulfolobus tokodaii strain 7 in complex with its effector L-glutamine: implications of effector binding in molecular association and DNA binding.
Nucleic Acids Res., 36, 2008
2EGZ
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BU of 2egz by Molmil
Crystal structure of the 3-dehydroquinate dehydratase from Aquifex aeolicus VF5
Descriptor: 3-dehydroquinate dehydratase, L(+)-TARTARIC ACID
Authors:Karthe, P, Kumarevel, T.S, Ebihara, A, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-02
Release date:2007-09-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of the 3-dehydroquinate dehydratase from Aquifex aeolicus VF5
To be Published
2PNS
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BU of 2pns by Molmil
1.9 Angstrom resolution crystal structure of a plant cysteine protease Ervatamin-C refinement with cDNA derived amino acid sequence
Descriptor: Ervatamin-C, a papain-like plant cysteine protease, PHOSPHATE ION, ...
Authors:Ghosh, R, Guha Thakurta, P, Biswas, S, Chakrabarti, C, Dattagupta, J.K.
Deposit date:2007-04-25
Release date:2007-06-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A thermostable cysteine protease precursor from a tropical plant contains an unusual C-terminal propeptide: cDNA cloning, sequence comparison and molecular modeling studies.
Biochem.Biophys.Res.Commun., 362, 2007
3SPA
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BU of 3spa by Molmil
Crystal Structure of Human Mitochondrial RNA Polymerase
Descriptor: CHLORIDE ION, DNA-directed RNA polymerase, mitochondrial, ...
Authors:Ringel, R, Sologub, M, Morozov, Y.I, Litonin, D, Cramer, P, Temiakov, D.
Deposit date:2011-07-01
Release date:2011-09-28
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of human mitochondrial RNA polymerase
Nature, 478, 2011
2E02
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Crystal structure of H369L mutant of yeast bleomycin hydrolase
Descriptor: Cysteine proteinase 1
Authors:O'Farrell, P.A, Joshua-Tor, L.
Deposit date:2006-10-01
Release date:2007-08-14
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Mutagenesis and crystallographic studies of the catalytic residues of the papain family protease bleomycin hydrolase: new insights into active-site structure
Biochem.J., 401, 2007
3SVA
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BU of 3sva by Molmil
Crystal structure of V57D mutant of human cystatin C
Descriptor: ACETATE ION, Cystatin-C, DI(HYDROXYETHYL)ETHER
Authors:Orlikowska, M, Szymanska, A, Borek, D, Otwinowski, Z, Skowron, P, Jankowska, E.
Deposit date:2011-07-12
Release date:2012-08-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.02 Å)
Cite:Structural characterization of V57D and V57P mutants of human cystatin C, an amyloidogenic protein.
Acta Crystallogr.,Sect.D, 69, 2013
4S27
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Crystal structure of Arabidopsis thaliana ThiC with bound aminoimidazole ribonucleotide, 5'-deoxyadenosine, L-methionine, Fe4S4 cluster and Fe
Descriptor: 1,4-BUTANEDIOL, 5'-DEOXYADENOSINE, 5-AMINOIMIDAZOLE RIBONUCLEOTIDE, ...
Authors:Fenwick, M.K, Mehta, A.P, Zhang, Y, Abdelwahed, S, Begley, T.P, Ealick, S.E.
Deposit date:2015-01-19
Release date:2015-04-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.27 Å)
Cite:Non-canonical active site architecture of the radical SAM thiamin pyrimidine synthase.
Nat Commun, 6
2E7W
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Crystal structure of the Lrp/AsnC like transcriptional regulators from Sulfolobus tokodaii 7
Descriptor: 150aa long hypothetical transcriptional regulator, GLUTAMINE, MAGNESIUM ION
Authors:Kumarevel, T.S, Karthe, P, Nakano, N, Shinkai, A, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-01-15
Release date:2008-01-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Crystal structure of glutamine receptor protein from Sulfolobus tokodaii strain 7 in complex with its effector L-glutamine: implications of effector binding in molecular association and DNA binding.
Nucleic Acids Res., 36, 2008
2EBV
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BU of 2ebv by Molmil
Solution structure of the third zf-RanBP domain from human Nuclear pore complex protein Nup153
Descriptor: Nuclear pore complex protein Nup153, ZINC ION
Authors:Zhang, H.P, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-09
Release date:2007-08-14
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the third zf-RanBP domain from human Nuclear pore complex protein Nup153
to be published
3T3X
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BU of 3t3x by Molmil
1.57 A structure of Friedreich's ataxia frataxin variant R165C
Descriptor: Frataxin, mitochondrial, SULFATE ION
Authors:Bridwell-Rabb, J, Winn, A.M, Barondeau, D.P.
Deposit date:2011-07-25
Release date:2011-08-10
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Structure-Function Analysis of Friedreich's Ataxia Mutants Reveals Determinants of Frataxin Binding and Activation of the Fe-S Assembly Complex.
Biochemistry, 50, 2011
2EBY
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BU of 2eby by Molmil
Crystal structure of a hypothetical protein from E. Coli
Descriptor: Putative HTH-type transcriptional regulator ybaQ, SULFATE ION
Authors:Karthe, P, Kumarevel, T.S, Ebihara, A, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-09
Release date:2007-08-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal structure of a hypothetical protein from E. Coli
To be Published
2EBZ
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BU of 2ebz by Molmil
Solution structure of the RGS domain from human Regulator of G-protein signaling 12 (RGS12)
Descriptor: Regulator of G-protein signaling 12
Authors:Zhang, H.P, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-09
Release date:2008-03-04
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the RGS domain from human Regulator of G-protein signaling 12 (RGS12)
To be Published
6KZ9
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BU of 6kz9 by Molmil
Crystal structure of plant Phospholipase D alpha
Descriptor: CALCIUM ION, Phospholipase D alpha 1
Authors:Li, J.X, Yu, F, Zhang, P.
Deposit date:2019-09-23
Release date:2019-10-30
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:Crystal structure of plant PLD alpha 1 reveals catalytic and regulatory mechanisms of eukaryotic phospholipase D.
Cell Res., 30, 2020
6L2W
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BU of 6l2w by Molmil
Crystal structure of a novel fold protein Gp72 from the freshwater cyanophage Mic1
Descriptor: freshwater cyanophage protein
Authors:Wang, Y, Jin, H, Yang, F, Jiang, Y.L, Zhao, Y.Y, Chen, Z.P, Li, W.F, Chen, Y, Zhou, C.Z, Li, Q.
Deposit date:2019-10-07
Release date:2020-05-13
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Crystal structure of a novel fold protein Gp72 from the freshwater cyanophage Mic1.
Proteins, 88, 2020
4S28
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BU of 4s28 by Molmil
Crystal structure of Arabidopsis thaliana ThiC with bound aminoimidazole ribonucleotide, S-adenosylhomocysteine, Fe4S4 cluster and Fe
Descriptor: 1,4-BUTANEDIOL, 5-AMINOIMIDAZOLE RIBONUCLEOTIDE, CHLORIDE ION, ...
Authors:Fenwick, M.K, Mehta, A.P, Zhang, Y, Abdelwahed, S, Begley, T.P, Ealick, S.E.
Deposit date:2015-01-19
Release date:2015-04-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Non-canonical active site architecture of the radical SAM thiamin pyrimidine synthase.
Nat Commun, 6
2EID
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BU of 2eid by Molmil
Galactose Oxidase W290G mutant
Descriptor: COPPER (II) ION, Galactose oxidase, SODIUM ION
Authors:Phillips, S.E, McPherson, M.J, Knowles, P.F, Akyumani, N, Firbank, S.J, Tamber, S.
Deposit date:2007-03-12
Release date:2007-04-24
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Stacking Tryptophan of Galactose Oxidase: A Second-Coordination Sphere Residue that Has Profound Effects on Tyrosyl Radical Behavior and Enzyme Catalysis
Biochemistry, 46, 2007
2PSY
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BU of 2psy by Molmil
Crystal Structure of Human Kallikrein 5 in complex with Leupeptin and Zinc
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Kallikrein-5, LEUPEPTIN, ...
Authors:Debela, M, Bode, W, Goettig, P.
Deposit date:2007-05-07
Release date:2007-09-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis of the zinc inhibition of human tissue kallikrein 5.
J.Mol.Biol., 373, 2007
2PVJ
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BU of 2pvj by Molmil
Structure-Based Design of Pyrazolo[1,5-a][1,3,5]triazine Derivatives as Potent Inhibitors of Protein Kinase CK2
Descriptor: 2-(CYCLOHEXYLMETHYLAMINO)-4-(PHENYLAMINO)PYRAZOLO[1,5-A][1,3,5]TRIAZINE-8-CARBONITRILE, Casein kinase II subunit alpha
Authors:Nie, Z, Perretta, C, Erickson, P, Margosiak, S, Almassy, R, Lu, J, Averill, A, Yager, K.M, Chu, S.
Deposit date:2007-05-09
Release date:2008-05-13
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure-based design, synthesis, and study of pyrazolo[1,5-a][1,3,5]triazine derivatives as potent inhibitors of protein kinase CK2.
Bioorg.Med.Chem.Lett., 17, 2007
3TE5
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BU of 3te5 by Molmil
structure of the regulatory fragment of sacchromyces cerevisiae ampk in complex with NADH
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Carbon catabolite-derepressing protein kinase, Nuclear protein SNF4, ...
Authors:Mayer, F.V, Heath, R, Underwood, E, Sanders, M.J, Carmena, D, McCartney, R, Leiper, F.C, Xiao, B, Jing, C, Walker, P.A, Haire, L.F, Ogrodowicz, R, Martin, S.R, Schmidt, M.C, Gamblin, S.J, Carling, D.
Deposit date:2011-08-12
Release date:2011-11-09
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:ADP Regulates SNF1, the Saccharomyces cerevisiae Homolog of AMP-Activated Protein Kinase.
Cell Metab, 14, 2011
2E03
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BU of 2e03 by Molmil
Crystal structure of NQ67E mutant of yeast bleomycin hydrolase
Descriptor: Cysteine proteinase 1
Authors:O'Farrell, P.A, Joshua-Tor, L.
Deposit date:2006-10-01
Release date:2007-08-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Mutagenesis and crystallographic studies of the catalytic residues of the papain family protease bleomycin hydrolase: new insights into active-site structure
Biochem.J., 401, 2007
2E7P
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BU of 2e7p by Molmil
Crystal structure of the holo form of glutaredoxin C1 from populus tremula x tremuloides
Descriptor: FE2/S2 (INORGANIC) CLUSTER, GLUTATHIONE, Glutaredoxin
Authors:Unno, H, Takahashi, T, Kawakami, T, Aimoto, S, Hase, T, Kusunoki, M, Rouhier, N, Jacquot, J.P.
Deposit date:2007-01-12
Release date:2007-09-25
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Functional, structural, and spectroscopic characterization of a glutathione-ligated [2Fe-2S] cluster in poplar glutaredoxin C1
Proc.Natl.Acad.Sci.Usa, 104, 2007
2EBP
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Solution structure of the SH3 domain from human SAM and SH3 domain containing protein 1
Descriptor: SAM and SH3 domain-containing protein 1
Authors:Zhang, H.P, Kurosaki, C, Yoshida, M, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-09
Release date:2007-08-14
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the SH3 domain from human SAM and SH3 domain containing protein 1
To be published
2EFG
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BU of 2efg by Molmil
TRANSLATIONAL ELONGATION FACTOR G COMPLEXED WITH GDP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, PROTEIN (ELONGATION FACTOR G DOMAIN 3), PROTEIN (ELONGATION FACTOR G)
Authors:Czworkowski, J, Wang, J, Steitz, T.A, Moore, P.B.
Deposit date:1998-09-23
Release date:1999-09-30
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The crystal structure of elongation factor G complexed with GDP, at 2.7 A resolution.
EMBO J., 13, 1994
1AH5
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BU of 1ah5 by Molmil
REDUCED FORM SELENOMETHIONINE-LABELLED HYDROXYMETHYLBILANE SYNTHASE DETERMINED BY MAD
Descriptor: 3-[5-{[3-(2-carboxyethyl)-4-(carboxymethyl)-5-methyl-1H-pyrrol-2-yl]methyl}-4-(carboxymethyl)-1H-pyrrol-3-yl]propanoic acid, HYDROXYMETHYLBILANE SYNTHASE
Authors:Helliwell, J.R, Nieh, Y.P, Harrop, S.J, Cassetta, A.
Deposit date:1997-04-13
Release date:1997-10-15
Last modified:2013-09-18
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Determination of the structure of seleno-methionine-labelled hydroxymethylbilane synthase in its active form by multi-wavelength anomalous dispersion.
Acta Crystallogr.,Sect.D, 55, 1999

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