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PDB: 45955 results

1XYI
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Hyperthermophile chromosomal protein Sac7d double mutant Val26Ala/Met29Ala in complex with DNA GCGATCGC
Descriptor: 5'-D(*GP*CP*GP*AP*TP*CP*GP*C)-3', DNA-binding proteins 7a/7b/7d
Authors:Chen, C.-Y, Ko, T.-P, Lin, T.-W, Chou, C.-C, Chen, C.-J, Wang, A.H.-J.
Deposit date:2004-11-10
Release date:2005-02-08
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Probing the DNA kink structure induced by the hyperthermophilic chromosomal protein Sac7d
Nucleic Acids Res., 33, 2005
1CD0
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BU of 1cd0 by Molmil
STRUCTURE OF HUMAN LAMDA-6 LIGHT CHAIN DIMER JTO
Descriptor: PROTEIN (JTO, A VARIABLE DOMAIN FROM LAMBDA-6 TYPE IMMUNOGLOBULIN LIGHT CHAIN)
Authors:Pokkuluri, P.R, Solomon, A, Weiss, D.T, Stevens, F.J, Schiffer, M.
Deposit date:1999-03-05
Release date:2000-03-06
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Tertiary structure of human lambda 6 light chains.
Amyloid, 6, 1999
5MA4
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BU of 5ma4 by Molmil
GFP-binding DARPin fusion gc_K7
Descriptor: Green fluorescent protein, K7
Authors:Hansen, S, Stueber, J, Ernst, P, Koch, A, Bojar, D, Batyuk, A, Plueckthun, A.
Deposit date:2016-11-03
Release date:2017-11-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Design and applications of a clamp for Green Fluorescent Protein with picomolar affinity.
Sci Rep, 7, 2017
1N4S
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BU of 1n4s by Molmil
Protein Geranylgeranyltransferase type-I Complexed with GGPP and a Geranylgeranylated KKKSKTKCVIL Peptide Product
Descriptor: CHLORIDE ION, Fusion protein consisting of transforming protein p21b and Ras related protein Rap-2b, GERAN-8-YL GERAN, ...
Authors:Taylor, J.S, Reid, T.S, Casey, P.J, Beese, L.S.
Deposit date:2002-11-01
Release date:2003-11-18
Last modified:2017-06-28
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of mammalian protein geranylgeranyltransferase type-I
EMBO J., 22, 2003
6Z0E
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BU of 6z0e by Molmil
HtrA1 inactive protease domain S328A with CARASIL mutation R274Q
Descriptor: CALCIUM ION, Serine protease HTRA1
Authors:Vetter, I.R, Stege, P, Ingendahl, L, Ehrmann, M.
Deposit date:2020-05-08
Release date:2021-05-19
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Repair strategies addressing pathogenic protein conformations
To Be Published
2WHS
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BU of 2whs by Molmil
Fluorescent Protein mKeima at pH 3.8
Descriptor: LARGE STOKES SHIFT FLUORESCENT PROTEIN, SULFATE ION
Authors:Violot, S, Carpentier, P, Blanchoin, L, Bourgeois, D.
Deposit date:2009-05-06
Release date:2009-08-11
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Reverse Ph-Dependence of Chromophore Protonation Explains the Large Stokes Shift of the Red Fluorescent Protein Mkeima.
J.Am.Chem.Soc., 131, 2009
2HCC
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BU of 2hcc by Molmil
SOLUTION STRUCTURE OF THE HUMAN CHEMOKINE HCC-2, NMR, 30 STRUCTURES
Descriptor: HUMAN CHEMOKINE HCC-2
Authors:Sticht, H, Escher, S.E, Schweimer, K, Forssmann, W.G, Roesch, P, Adermann, K.
Deposit date:1998-07-03
Release date:1999-07-13
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Solution structure of the human CC chemokine 2: A monomeric representative of the CC chemokine subtype.
Biochemistry, 38, 1999
1SVW
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BU of 1svw by Molmil
Crystal Structure of YsxC complexed with GMPPNP
Descriptor: GTP-binding protein YsxC, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION
Authors:Ruzheinikov, S.N, Das, S.K, Sedelnikova, S.E, Baker, P.J, Artymiuk, P.J, Garcia-Lara, J, Foster, S.J, Rice, D.W.
Deposit date:2004-03-30
Release date:2004-05-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Analysis of the Open and Closed Conformations of the GTP-binding Protein YsxC from Bacillus subtilis.
J.Mol.Biol., 339, 2004
3ZX4
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BU of 3zx4 by Molmil
The 3-dimensional structure of MpgP from Thermus thermophilus HB27, in complex with the alpha-mannosylglycerate,orthophosphate and magnesium
Descriptor: (2R)-3-hydroxy-2-(alpha-D-mannopyranosyloxy)propanoic acid, MAGNESIUM ION, MANNOSYL-3-PHOSPHOGLYCERATE PHOSPHATASE, ...
Authors:Goncalves, S, Esteves, A.M, Santos, H, Borges, N, Matias, P.M.
Deposit date:2011-08-07
Release date:2011-10-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:The Three-Dimensional Structure of Mannosyl-3-Phosphoglycerate Phosphatase from Thermus Thermophilus Hb27: A New Member of the Haloalkanoic Acid Dehalogenase Superfamily.
Biochemistry, 50, 2011
2X01
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BU of 2x01 by Molmil
CRYSTAL STRUCTURE OF THE OXA-10 S67A MUTANT AT PH 7
Descriptor: BETA-LACTAMASE OXA-10, DIMETHYL SULFOXIDE, SULFATE ION, ...
Authors:Vercheval, L, Kerff, F, Bauvois, C, Sauvage, E, Guiet, R, Galleni, M, Charlier, P.
Deposit date:2009-12-04
Release date:2010-12-08
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Evidence of Chloride Inhibition and Impact of the Hydrophobic Core on the Lysine Carboxylated in Class D Beta-Lactamase
To be Published
1XMY
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BU of 1xmy by Molmil
Catalytic Domain Of Human Phosphodiesterase 4B In Complex With (R)-Rolipram
Descriptor: MAGNESIUM ION, ROLIPRAM, ZINC ION, ...
Authors:Card, G.L, England, B.P, Suzuki, Y, Fong, D, Powell, B, Lee, B, Luu, C, Tabrizizad, M, Gillette, S, Ibrahim, P.N, Artis, D.R, Bollag, G, Milburn, M.V, Kim, S.-H, Schlessinger, J, Zhang, K.Y.J.
Deposit date:2004-10-04
Release date:2004-12-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Basis for the Activity of Drugs that Inhibit Phosphodiesterases.
STRUCTURE, 12, 2004
4E4O
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BU of 4e4o by Molmil
Interactions of Ba2+ with a non-self-complementary Z-type DNA duplex
Descriptor: BARIUM ION, DNA (5'-D(*CP*AP*CP*GP*CP*G)-3'), DNA (5'-D(*CP*GP*CP*GP*TP*G)-3')
Authors:Mandal, P.K, Venkadesh, S, Gautham, N.
Deposit date:2012-03-13
Release date:2013-03-13
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Interactions of Ba2+ with a non-self-complementary Z-type DNA duplex
To be Published
3ZX2
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BU of 3zx2 by Molmil
NTPDase1 in complex with Decavanadate
Descriptor: ACETIC ACID, CHLORIDE ION, DECAVANADATE, ...
Authors:Zebisch, M, Schaefer, P, Straeter, N.
Deposit date:2011-08-04
Release date:2011-11-30
Last modified:2018-01-31
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Crystallographic Evidence for a Domain Motion in Rat Nucleoside Triphosphate Diphosphohydrolase (Ntpdase) 1.
J.Mol.Biol., 415, 2012
2OW1
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BU of 2ow1 by Molmil
MMP-9 active site mutant with trifluoromethyl hydroxamate inhibitor
Descriptor: (2R)-2-AMINO-3,3,3-TRIFLUORO-N-HYDROXY-2-{[(4-PHENOXYPHENYL)SULFONYL]METHYL}PROPANAMIDE, CALCIUM ION, CHLORIDE ION, ...
Authors:Tochowicz, A, Bode, W, Maskos, K, Goettig, P.
Deposit date:2007-02-15
Release date:2007-06-19
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structures of MMP-9 Complexes with Five Inhibitors: Contribution of the Flexible Arg424 Side-chain to Selectivity.
J.Mol.Biol., 371, 2007
3ZX3
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BU of 3zx3 by Molmil
Crystal Structure and Domain Rotation of NTPDase1 CD39
Descriptor: ACETIC ACID, CHLORIDE ION, ECTONUCLEOSIDE TRIPHOSPHATE DIPHOSPHOHYDROLASE 1, ...
Authors:Zebisch, M, Schaefer, P, Straeter, N.
Deposit date:2011-08-04
Release date:2011-11-30
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystallographic Evidence for a Domain Motion in Rat Nucleoside Triphosphate Diphosphohydrolase (Ntpdase) 1.
J.Mol.Biol., 415, 2012
2JIS
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BU of 2jis by Molmil
Human cysteine sulfinic acid decarboxylase (CSAD) in complex with PLP.
Descriptor: CYSTEINE SULFINIC ACID DECARBOXYLASE, NITRATE ION, PYRIDOXAL-5'-PHOSPHATE
Authors:Collins, R, Moche, M, Arrowsmith, C, Berglund, H, Busam, R, Dahlgren, L.G, Edwards, A, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Hallberg, B.M, Johansson, I, Kallas, A, Karlberg, T, Kotenyova, T, Lehtio, L, Nordlund, P, Nyman, T, Ogg, D, Persson, C, Sagemark, J, Stenmark, P, Sundstrom, M, Thorsell, A.G, Tresaugues, L, van den Berg, S, Weigelt, J, Welin, M, Holmberg-Schiavone, L, Structural Genomics Consortium (SGC)
Deposit date:2007-06-30
Release date:2007-08-28
Last modified:2015-04-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The Crystal Structure of Human Cysteine Sulfinic Acid Decarboxylase (Csad)
To be Published
3OLH
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BU of 3olh by Molmil
Human 3-mercaptopyruvate sulfurtransferase
Descriptor: 3-mercaptopyruvate sulfurtransferase, SODIUM ION, SULFATE ION
Authors:Karlberg, T, Collins, R, Arrowsmith, C.H, Berglund, H, Bountra, C, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, I, Kotenyova, T, Kouznetsova, E, Moche, M, Nordlund, P, Nyman, T, Persson, C, Schutz, P, Sehic, A, Siponen, M.I, Thorsell, A.G, Tresaugues, L, Van Den Berg, S, Wahlberg, E, Weigelt, J, Welin, M, Schuler, H, Structural Genomics Consortium (SGC)
Deposit date:2010-08-26
Release date:2010-09-29
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Human 3-Mercaptopyruvate Sulfurtransferase
To be Published
1Z2N
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BU of 1z2n by Molmil
Inositol 1,3,4-trisphosphate 5/6-kinase complexed Mg2+/ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, inositol 1,3,4-trisphosphate 5/6-kinase
Authors:Miller, G.J, Wilson, M.P, Majerus, P.W, Hurley, J.H.
Deposit date:2005-03-08
Release date:2005-04-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Specificity determinants in inositol polyphosphate synthesis: crystal structure of inositol 1,3,4-trisphosphate 5/6-kinase.
Mol.Cell, 18, 2005
4E7Y
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BU of 4e7y by Molmil
Lambda-[Ru(phen)2(dppz)]2+ Bound to CCGGATCCGG
Descriptor: 5'-D(*CP*CP*GP*GP*AP*TP*CP*CP*GP*G)-3', BARIUM ION, Lambda-Ru(phen)2(dppz) complex
Authors:Hall, J.P, Cardin, C.J.
Deposit date:2012-03-19
Release date:2012-07-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of lambda-[Ru(phen)2(dppz)]2+ with oligonucleotides containing TA/TA and AT/AT steps show two intercalation modes.
Nat Chem, 4, 2012
3OT9
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BU of 3ot9 by Molmil
Phosphopentomutase from Bacillus cereus bound to glucose-1,6-bisphosphate
Descriptor: 1,6-di-O-phosphono-alpha-D-glucopyranose, GLYCEROL, MANGANESE (II) ION, ...
Authors:Panosian, T.D, Nannemann, D.P, Watkins, G, Phalen, V, Wadzinski, B, Bachmann, B.O, Iverson, T.M.
Deposit date:2010-09-10
Release date:2010-12-29
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Bacillus cereus Phosphopentomutase Is an Alkaline Phosphatase Family Member That Exhibits an Altered Entry Point into the Catalytic Cycle.
J.Biol.Chem., 286, 2011
4YP2
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Cleavage of nicotinamide adenine dinucleotides by the ribosome inactivating protein from Momordica charantia
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, NICOTINAMIDE, Ribosome-inactivating protein momordin I
Authors:Vinkovic, M, Hussain, J, Wood, G.E, Gill, R, Wood, S.P.
Deposit date:2015-03-12
Release date:2015-05-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Cleavage of nicotinamide adenine dinucleotide by the ribosome-inactivating protein from Momordica charantia.
Acta Crystallogr.,Sect.F, 71, 2015
5BK3
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BU of 5bk3 by Molmil
Crystal structure of the neutralizing anti-circumsporozoite protein 580 antibody
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, 580 Antibody, heavy chain, ...
Authors:Scally, S.W, Bosch, A, Triller, G, Wardemann, H, Julien, J.P.
Deposit date:2017-09-12
Release date:2017-12-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Natural Parasite Exposure Induces Protective Human Anti-Malarial Antibodies.
Immunity, 47, 2017
8JAT
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BU of 8jat by Molmil
Crystal structure of the 3-ketodihydrosphingosine reductase TSC10 from Cryptococcus neoformans
Descriptor: 3-ketodihydrosphingosine reductase TSC10, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Zhao, P, Kuang, Z.
Deposit date:2023-05-07
Release date:2023-06-21
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of the 3-ketodihydrosphingosine reductase TSC10 from Cryptococcus neoformans.
Biochem.Biophys.Res.Commun., 670, 2023
5BN6
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BU of 5bn6 by Molmil
Crystal Structure of Frutalin from Artocarpus incisa in complex with galactose
Descriptor: Jacalin, beta-D-galactopyranose
Authors:Vieira Neto, A.E, Pereira, H.M, Moreno, F.B.M.B, Moreira, A.C.O.M, Lobo, M.D.P, Sousa, F.D, Grangeiro, T.B, Moreira, R.A.
Deposit date:2015-05-25
Release date:2016-06-08
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.6499 Å)
Cite:Crystal Structure of Frutalin from Artocarpus incisa in complex with galactose
To Be Published
7R73
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Crystal structure of llama VHH antibody D7 in complex with HIV-1 gp120 core
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Glycoprotein 120, Llama antibody D7
Authors:Zhou, T, Kwong, P.D.
Deposit date:2021-06-24
Release date:2022-03-30
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Structural basis for llama nanobody recognition and neutralization of HIV-1 at the CD4-binding site.
Structure, 30, 2022

224004

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