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PDB: 45955 件

4LEP
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Structural insights into substrate recognition in proton dependent oligopeptide transporters
分子名称: N-[(1R)-1-phosphonoethyl]-L-alaninamide, Proton:oligopeptide symporter POT family, ZINC ION
著者Guettou, F, Quistgaard, E.M, Tresaugues, L, Moberg, P, Jegerschold, C, Zhu, L, Jong, A.J, Nordlund, P, Low, C.
登録日2013-06-26
公開日2013-07-10
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural insights into substrate recognition in proton-dependent oligopeptide transporters.
Embo Rep., 14, 2013
1PP7
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Crystal structure of the T. vaginalis Initiator binding protein bound to the ferredoxin Inr
分子名称: 39 kDa initiator binding protein, FERREDOXIN INR, ZINC ION
著者Schumacher, M.A, Lau, A.O.T, Johnson, P.J.
登録日2003-06-16
公開日2003-11-18
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Structural Basis of Core Promoter Recognition in a Primitive Eukaryote
Cell(Cambridge,Mass.), 115, 2003
1FCX
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ISOTYPE SELECTIVITY OF THE HUMAN RETINOIC ACID NUCLEAR RECEPTOR HRAR: THE COMPLEX WITH THE RARGAMMA-SELECTIVE RETINOID BMS184394
分子名称: 6-[HYDROXY-(5,5,8,8-TETRAMETHYL-5,6,7,8-TETRAHYDRO-NAPHTALEN-2-YL)-METHYL]-NAPHTALENE-2-CARBOXYLIC ACID, DODECYL-ALPHA-D-MALTOSIDE, RETINOIC ACID RECEPTOR GAMMA-1
著者Klaholz, B.P, Mitschler, A, Moras, D, Structural Proteomics in Europe (SPINE)
登録日2000-07-19
公開日2000-09-11
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Structural basis for isotype selectivity of the human retinoic acid nuclear receptor.
J.Mol.Biol., 302, 2000
1O26
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BU of 1o26 by Molmil
Crystal structure of Thymidylate Synthase Complementing Protein (TM0449) from Thermotoga maritima with FAD and dUMP at 1.6 A resolution
分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, FLAVIN-ADENINE DINUCLEOTIDE, TRIETHYLENE GLYCOL, ...
著者Mathews, I.I, Deacon, A.M, Canaves, J.M, McMullan, D, Lesley, S.A, Agarwalla, S, Kuhn, P, Joint Center for Structural Genomics (JCSG)
登録日2003-02-18
公開日2003-06-24
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Functional Analysis of Substrate and Cofactor Complex Structures of a Thymidylate Synthase-Complementing Protein
Structure, 11, 2003
2VUL
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Thermostable mutant of ENVIRONMENTALLY ISOLATED GH11 XYLANASE
分子名称: DODECAETHYLENE GLYCOL, GH11 XYLANASE, SULFATE ION
著者Dumon, C, Varvak, A, Wall, M.A, Flint, J.E, Lewis, R.J, Lakey, J.H, Luginbuhl, P, Healey, S, Todaro, T, Desantis, G, Sun, M, Parra-Gessert, L, Tan, X, Weiner, D.P, Gilbert, H.J.
登録日2008-05-27
公開日2008-06-17
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Engineering Hyperthermostability Into a Gh11 Xylanase is Mediated by Subtle Changes to Protein Structure.
J.Biol.Chem., 283, 2008
6SL1
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BU of 6sl1 by Molmil
Structure of the open conformation of CtTel1
分子名称: MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Serine/threonine-protein kinase Tel1
著者Jansma, M, Eustermann, S.E, Kostrewa, D, Lammens, K, Hopfner, K.P.
登録日2019-08-16
公開日2019-10-30
最終更新日2020-05-13
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Near-Complete Structure and Model of Tel1ATM from Chaetomium thermophilum Reveals a Robust Autoinhibited ATP State.
Structure, 28, 2020
1YR9
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PAB0955 crystal structure : a GTPase in GDP and PO4 bound form from Pyrococcus abyssi
分子名称: ATP(GTP)binding protein, GUANOSINE-5'-DIPHOSPHATE, PHOSPHATE ION
著者Gras, S, Carpentier, P, Armengaud, J, Housset, D.
登録日2005-02-03
公開日2006-02-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural insights into a new homodimeric self-activated GTPase family.
Embo Rep., 8, 2007
5QGK
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BU of 5qgk by Molmil
PanDDA analysis group deposition of models with modelled events (e.g. bound ligands) -- Crystal Structure of NUDT7 in complex with FMOPL000679a
分子名称: ACETATE ION, DIMETHYL SULFOXIDE, N-(4-methylphenyl)-1H-pyrazolo[3,4-d]pyrimidin-4-amine, ...
著者Krojer, T, Talon, R, Fairhead, M, Diaz Saez, L, Bradley, A.R, Aimon, A, Collins, P, Brandao-Neto, J, Douangamath, A, Ruda, G.F, Szommer, T, Srikannathasan, V, Elkins, J, Spencer, J, London, N, Nelson, A, Brennan, P.E, Huber, K, Bountra, C, Arrowsmith, C.H, Edwards, A, von Delft, F.
登録日2018-05-15
公開日2019-03-27
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献PanDDA analysis group deposition of models with modelled events (e.g. bound ligands)
To Be Published
5QGU
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PanDDA analysis group deposition of models with modelled events (e.g. bound ligands) -- Crystal Structure of NUDT7 in complex with FMOPL000747a
分子名称: (4-tert-butylpiperidin-1-yl)(phenyl)methanone, ACETATE ION, DIMETHYL SULFOXIDE, ...
著者Krojer, T, Talon, R, Fairhead, M, Diaz Saez, L, Bradley, A.R, Aimon, A, Collins, P, Brandao-Neto, J, Douangamath, A, Ruda, G.F, Szommer, T, Srikannathasan, V, Elkins, J, Spencer, J, London, N, Nelson, A, Brennan, P.E, Huber, K, Bountra, C, Arrowsmith, C.H, Edwards, A, von Delft, F.
登録日2018-05-15
公開日2019-03-27
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献PanDDA analysis group deposition of models with modelled events (e.g. bound ligands)
To Be Published
1RM9
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BU of 1rm9 by Molmil
Probing the Role of Tryptophans in Aequorea Victoria Green Fluorescent Proteins with an Expanded Genetic Code
分子名称: avermectin-sensitive chloride channel GluCl beta/cyan fluorescent protein fusion
著者Budisa, N, Pal, P.P, Alefelder, S, Birle, P, Krywcun, T, Rubini, M, Wenger, W, Bae, J.H, Steiner, T.
登録日2003-11-27
公開日2004-06-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Probing the role of tryptophans in Aequorea victoria green fluorescent proteins with an expanded genetic code
Biol.Chem., 385, 2004
6SVE
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BU of 6sve by Molmil
Protein allostery of the WW domain at atomic resolution: pCdc25C bound structure
分子名称: Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
著者Strotz, D, Orts, J, Friedmann, M, Guntert, P, Vogeli, B, Riek, R.
登録日2019-09-18
公開日2020-10-07
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Protein Allostery at Atomic Resolution.
Angew.Chem.Int.Ed.Engl., 59, 2020
5QH7
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BU of 5qh7 by Molmil
PanDDA analysis group deposition of models with modelled events (e.g. bound ligands) -- Crystal Structure of NUDT7 in complex with NUOOA000194a
分子名称: 2-(3-methylphenyl)-N-(1,2-oxazol-3-yl)acetamide, ACETATE ION, DIMETHYL SULFOXIDE, ...
著者Krojer, T, Talon, R, Fairhead, M, Diaz Saez, L, Bradley, A.R, Aimon, A, Collins, P, Brandao-Neto, J, Douangamath, A, Ruda, G.F, Szommer, T, Srikannathasan, V, Elkins, J, Spencer, J, London, N, Nelson, A, Brennan, P.E, Huber, K, Bountra, C, Arrowsmith, C.H, Edwards, A, von Delft, F.
登録日2018-05-15
公開日2019-03-27
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献PanDDA analysis group deposition of models with modelled events (e.g. bound ligands)
To Be Published
1RMP
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BU of 1rmp by Molmil
Probing the Role of Tryptophans in Aequorea Victoria Green Fluorescent Proteins with an Expanded Genetic Code
分子名称: SIGF1-GFP fusion protein
著者Budisa, N, Pal, P.P, Alefelder, S, Birle, P, Krywcun, T, Rubini, M, Wenger, W, Bae, J.H, Steiner, T.
登録日2003-11-28
公開日2004-06-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Probing the role of tryptophans in Aequorea victoria green fluorescent proteins with an expanded genetic code
Biol.Chem., 385, 2004
6SKK
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BU of 6skk by Molmil
Structure of the native full-length HIV-1 capsid protein in helical assembly (-13,8)
分子名称: capsid protein
著者Ni, T, Gerard, S, Zhao, G, Ning, J, Zhang, P.
登録日2019-08-15
公開日2020-08-26
最終更新日2022-03-30
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Intrinsic curvature of the HIV-1 CA hexamer underlies capsid topology and interaction with cyclophilin A.
Nat.Struct.Mol.Biol., 27, 2020
2CCY
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BU of 2ccy by Molmil
STRUCTURE OF FERRICYTOCHROME C(PRIME) FROM RHODOSPIRILLUM MOLISCHIANUM AT 1.67 ANGSTROMS RESOLUTION
分子名称: CYTOCHROME C, HEME C
著者Finzel, B.C, Weber, P.C, Hardman, K.D, Salemme, F.R.
登録日1985-08-27
公開日1986-01-21
最終更新日2021-03-03
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Structure of ferricytochrome c' from Rhodospirillum molischianum at 1.67 A resolution.
J.Mol.Biol., 186, 1985
5U5G
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BU of 5u5g by Molmil
Psf3 in complex with NADP+ and 2-OPP
分子名称: (2-oxopropyl)phosphonic acid, 6-phosphogluconate dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
著者Olivares, P, Nair, S.K.
登録日2016-12-06
公開日2017-01-04
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.048 Å)
主引用文献Characterization of Two Late-Stage Enzymes Involved in Fosfomycin Biosynthesis in Pseudomonads.
ACS Chem. Biol., 12, 2017
8FDT
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BU of 8fdt by Molmil
Engineered human dynein motor domain in the microtubule-unbound state with LIS1 complex in the buffer containing ATP-Vi
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Cytoplasmic dynein 1 heavy chain 1,Serine--tRNA ligase, ...
著者Ton, W, Wang, Y, Chai, P.
登録日2022-12-04
公開日2023-06-21
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Microtubule-binding-induced allostery triggers LIS1 dissociation from dynein prior to cargo transport.
Nat.Struct.Mol.Biol., 30, 2023
7LZ2
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Structure of glutamate receptor-like channel GLR3.4 ligand-binding domain in complex with methionine
分子名称: BETA-MERCAPTOETHANOL, CHLORIDE ION, GLYCEROL, ...
著者Gangwar, S.P, Green, M.N, Sobolevsky, A.I.
登録日2021-03-08
公開日2021-07-28
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure of the Arabidopsis thaliana glutamate receptor-like channel GLR3.4.
Mol.Cell, 81, 2021
8FTX
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FlgN-FliJ fusion complex
分子名称: Flagella biosynthesis chaperone FlgN, Flagellar FliJ protein fusion
著者Rossi, P, Kalodimos, C.G.
登録日2023-01-13
公開日2023-07-05
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Chaperone Recycling in Late-Stage Flagellar Assembly.
J.Mol.Biol., 435, 2023
6SKZ
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Structure of the closed conformation of CtTel1
分子名称: MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Serine/threonine-protein kinase Tel1
著者Jansma, M, Eustermann, S.E, Kostrewa, D, Lammens, K, Hopfner, K.P.
登録日2019-08-16
公開日2019-10-30
最終更新日2020-01-15
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Near-Complete Structure and Model of Tel1ATM from Chaetomium thermophilum Reveals a Robust Autoinhibited ATP State.
Structure, 28, 2020
3PVN
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BU of 3pvn by Molmil
Triclinic form of Human C-Reactive Protein in complex with Zinc
分子名称: C-reactive protein, CALCIUM ION, ZINC ION
著者Guillon, C, Mavoungou Bigouagou, U, Jeannin, P, Delneste, Y, Gouet, P.
登録日2010-12-07
公開日2012-01-11
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献A Staggered Decameric Assembly of Human C-Reactive Protein Stabilized by Zinc Ions Revealed by X-ray Crystallography.
Protein Pept.Lett., 22, 2014
2FRD
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BU of 2frd by Molmil
Structure of Transhydrogenase (dI.S138A.NADH)2(dIII.NADPH)1 asymmetric complex
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, NAD(P) transhydrogenase subunit alpha part 1, NAD(P) transhydrogenase subunit beta, ...
著者Brondijk, T.H, van Boxel, G.I, Mather, O.C, Quirk, P.G, White, S.A, Jackson, J.B.
登録日2006-01-19
公開日2006-02-28
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献The Role of Invariant Amino Acid Residues at the Hydride Transfer Site of Proton-translocating Transhydrogenase.
J.Biol.Chem., 281, 2006
8FD6
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BU of 8fd6 by Molmil
Engineered human dynein motor domain in the microtubule-unbound state in the buffer containing ATP-Vi
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Cytoplasmic dynein 1 heavy chain 1,Serine--tRNA ligase, ...
著者Ton, W, Wang, Y, Chai, P.
登録日2022-12-02
公開日2023-06-21
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Microtubule-binding-induced allostery triggers LIS1 dissociation from dynein prior to cargo transport.
Nat.Struct.Mol.Biol., 30, 2023
7P4X
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SOLUTION NMR STRUCTURE OF PALUSTRIN-CA IN 50% TRIFLUOROETHANOL
分子名称: Palustrin-Ca antimicrobial peptide
著者Timmons, P.B, Hewage, C.M.
登録日2021-07-13
公開日2021-12-01
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Conformation and membrane interaction studies of the potent antimicrobial and anticancer peptide palustrin-Ca.
Sci Rep, 11, 2021
1K06
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Crystallographic Binding Study of 100 mM N-benzoyl-N'-beta-D-glucopyranosyl urea to glycogen phosphorylase b
分子名称: Glycogen Phosphorylase, N-[(phenylcarbonyl)carbamoyl]-beta-D-glucopyranosylamine, PYRIDOXAL-5'-PHOSPHATE
著者Oikonomakos, N.G, Kosmopoulou, M, Zographos, S.E, Leonidas, D.D, Chrysina, E.D, Somsak, L, Nagy, V, Praly, J.P, Docsa, T, Toth, B, Gergely, P.
登録日2001-09-18
公開日2001-10-03
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Binding of N-acetyl-N '-beta-D-glucopyranosyl urea and N-benzoyl-N '-beta-D-glucopyranosyl urea to glycogen phosphorylase b: kinetic and crystallographic studies.
Eur.J.Biochem., 269, 2002

224004

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