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PDB: 45788 件

6ZJE
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BU of 6zje by Molmil
Crystal structure of human adenylate kinase 3, AK3, in complex with inhibitor Ap5A
分子名称: BIS(ADENOSINE)-5'-PENTAPHOSPHATE, CHLORIDE ION, GTP:AMP phosphotransferase AK3, ...
著者Grundstrom, C, Rogne, P, Wolf-Watz, M, Sauer-Eriksson, A.E.
登録日2020-06-28
公開日2020-09-16
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Structural Basis for GTP versus ATP Selectivity in the NMP Kinase AK3.
Biochemistry, 59, 2020
7M0N
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BU of 7m0n by Molmil
The crystal structure of wild type PA endonuclease (A/Vietnam/1203/2004) in complex with Raltegravir
分子名称: GLYCEROL, MANGANESE (II) ION, N-(4-fluorobenzyl)-5-hydroxy-1-methyl-2-(1-methyl-1-{[(5-methyl-1,3,4-oxadiazol-2-yl)carbonyl]amino}ethyl)-6-oxo-1,6-di hydropyrimidine-4-carboxamide, ...
著者Cuypers, M.G, Slavish, P.J, Yun, M.K, Dubois, R, Rankovic, Z, White, S.W.
登録日2021-03-11
公開日2022-03-02
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Chemical scaffold recycling: Structure-guided conversion of an HIV integrase inhibitor into a potent influenza virus RNA-dependent RNA polymerase inhibitor designed to minimize resistance potential.
Eur.J.Med.Chem., 247, 2023
5VM2
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BU of 5vm2 by Molmil
Crystal structure of ECK1772, an oxidoreductase/dehydrogenase of unknown specificity involved in membrane biogenesis from Escherichia coli
分子名称: Alcohol dehydrogenase, CHLORIDE ION, MAGNESIUM ION, ...
著者Stogios, P.J, Skarina, T, McChesney, C, Di Leo, R, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2017-04-26
公開日2017-06-07
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.983 Å)
主引用文献Crystal structure of ECK1772, an oxidoreductase/dehydrogenase of unknown specificity involved in membrane biogenesis from Escherichia coli
To Be Published
5VRQ
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BU of 5vrq by Molmil
Crystal structure of Legionella pneumophila effector AnkC
分子名称: Ankyrin repeat-containing protein
著者Kozlov, G, Wong, K, Wang, W, Skubak, P, Munoz-Escobar, J, Liu, Y, Pannu, N.S, Gehring, K, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2017-05-11
公開日2017-11-29
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.205 Å)
主引用文献Ankyrin repeats as a dimerization module.
Biochem. Biophys. Res. Commun., 495, 2018
7RRX
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BU of 7rrx by Molmil
Crystal Structure of the ER-alpha Ligand-binding Domain (L372S, L536S) in complex with DMERI-19
分子名称: (1S,2R,4S)-5,6-bis(4-hydroxyphenyl)-N-{4-[2-(piperidin-1-yl)ethoxy]phenyl}-N-(2,2,2-trifluoroethyl)-7-oxabicyclo[2.2.1]hept-5-ene-2-sulfonamide, CHLORIDE ION, Estrogen receptor
著者Min, J, Nwachukwu, J.C, Min, C.K, Njeri, J.W, Srinivasan, S, Rangarajan, E.S, Nettles, C.C, Yan, S, Houtman, R, Griffin, P.R, Izard, T, Katzenellenbogen, B.S, Katzenellenbogen, J.A, Nettles, K.W.
登録日2021-08-10
公開日2021-09-22
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Dual-mechanism estrogen receptor inhibitors.
Proc.Natl.Acad.Sci.USA, 118, 2021
7RS8
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BU of 7rs8 by Molmil
Crystal Structure of the ER-alpha Ligand-binding Domain (L372S, L536S) in complex with DMERI-16
分子名称: (1R,2S,4R)-5-(4-hydroxyphenyl)-N-(4-methoxyphenyl)-6-{4-[2-(piperidin-1-yl)ethoxy]phenyl}-N-(2,2,2-trifluoroethyl)-7-oxabicyclo[2.2.1]hept-5-ene-2-sulfonamide, Estrogen receptor
著者Min, J, Nwachukwu, J.C, Min, C.K, Njeri, J.W, Srinivasan, S, Rangarajan, E.S, Nettles, C.C, Yan, S, Houtman, R, Griffin, P.R, Izard, T, Katzenellenbogen, B.S, Katzenellenbogen, J.A, Nettles, K.W.
登録日2021-08-11
公開日2021-09-22
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Dual-mechanism estrogen receptor inhibitors.
Proc.Natl.Acad.Sci.USA, 118, 2021
7LZ3
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BU of 7lz3 by Molmil
Computational design of constitutively active cGAS
分子名称: Cyclic GMP-AMP synthase, GLYCEROL, ZINC ION
著者Dowling, Q, Volkman, H.E, Gray, E.E, Ovchinnikov, S, Cambier, S, Bera, A.K, Bick, M, Kang, A, Stetson, D.B, King, N.P.
登録日2021-03-08
公開日2022-03-16
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献Computational design of constitutively active cGAS.
Nat.Struct.Mol.Biol., 30, 2023
8B04
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BU of 8b04 by Molmil
STRUCTURE OF PORCINE PANCREATIC ELASTASE BOUND TO A FRAGMENT OF AN ISOXAZOLONE INHIBITOR
分子名称: 2-cyclopropylcarbonyl-3-propan-2-yl-1,2-oxazol-5-one, CALCIUM ION, Chymotrypsin-like elastase family member 1, ...
著者Ferraroni, M, Giovannoni, P, Masini, V.
登録日2022-09-07
公開日2023-09-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献X-ray structural study of human neutrophil elastase inhibition with a series of azaindoles, azaindazoles and isoxazolones
J.Mol.Struct., 1274, 2023
7RS7
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BU of 7rs7 by Molmil
Crystal Structure of the ER-alpha Ligand-binding Domain (L372S, L536S) in complex with DMERI-30
分子名称: (1S,2R,4S,5S,6S)-N,5,6-tris(4-hydroxyphenyl)-N-(2,2,2-trifluoroethyl)-7-oxabicyclo[2.2.1]heptane-2-sulfonamide, Estrogen receptor
著者Min, J, Nwachukwu, J.C, Min, C.K, Njeri, J.W, Srinivasan, S, Rangarajan, E.S, Nettles, C.C, Yan, S, Houtman, R, Griffin, P.R, Izard, T, Katzenellenbogen, B.S, Katzenellenbogen, J.A, Nettles, K.W.
登録日2021-08-11
公開日2021-09-22
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Dual-mechanism estrogen receptor inhibitors.
Proc.Natl.Acad.Sci.USA, 118, 2021
5VYW
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BU of 5vyw by Molmil
Crystal structure of Lactococcus lactis pyruvate carboxylase
分子名称: BIOTIN, MANGANESE (II) ION, Pyruvate carboxylase
著者Choi, P.H, Tong, L.
登録日2017-05-26
公開日2017-08-16
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural and functional studies of pyruvate carboxylase regulation by cyclic di-AMP in lactic acid bacteria.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
8B1Y
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BU of 8b1y by Molmil
STRUCTURE OF PORCINE PANCREATIC ELASTASE BOUND TO A FRAGMENT OF A 5-AZAINDAZOLE INHIBITOR
分子名称: 1-cyclopropylcarbonylpyrazolo[4,3-c]pyridine-3-carbonitrile, CALCIUM ION, Chymotrypsin-like elastase family member 1, ...
著者Ferraroni, M, Giovannoni, P, Gerace, A.
登録日2022-09-12
公開日2023-09-20
実験手法X-RAY DIFFRACTION (1.12 Å)
主引用文献X-ray structural study of human neutrophil elastase inhibition with a series of azaindoles, azaindazoles and isoxazolones
J.Mol.Struct., 1274, 2023
7RBR
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BU of 7rbr by Molmil
The crystal structure of Papain-Like Protease of SARS CoV-2, C111S mutant, in complex with a Lys48-linked di-ubiquitin
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Papain-like protease, ...
著者Osipiuk, J, Tesar, C, Endres, M, Lanham, B.T, Wydorski, P, Fushman, D, Joachimiak, L, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2021-07-06
公開日2021-09-29
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Dual domain recognition determines SARS-CoV-2 PLpro selectivity for human ISG15 and K48-linked di-ubiquitin.
Nat Commun, 14, 2023
5VNP
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BU of 5vnp by Molmil
X-ray crystal structure of Halotag bound to the P1 benzoxadiazole fluorogenic ligand
分子名称: CHLORIDE ION, Haloalkane dehalogenase, N-{2-[2-(hexyloxy)ethoxy]ethyl}-N~2~-methyl-N~2~-{[7-(methylamino)-2,1,3-benzoxadiazol-4-yl]sulfonyl}glycinamide
著者Dunham, N.P, Boal, A.K.
登録日2017-05-01
公開日2017-06-14
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献AgHalo: A Facile Fluorogenic Sensor to Detect Drug-Induced Proteome Stress.
Angew. Chem. Int. Ed. Engl., 56, 2017
5VXL
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BU of 5vxl by Molmil
2.80 A resolution structure of IpaD from Shigella flexneri in complex with single-domain antibody JPS-G3
分子名称: Invasin IpaD, single-domain antibody JPS-G3
著者Barta, M.L, Lovell, S, Battaile, K.P, Picking, W.D, Picking, W.L.
登録日2017-05-23
公開日2017-08-30
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献2.80 A resolution structure of IpaD from Shigella flexneri in complex with single-domain antibody JPS-G3
To Be Published
5VY1
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BU of 5vy1 by Molmil
Crystal structure of the extended Tudor domain from BmPAPI
分子名称: Tudor and KH domain-containing protein homolog
著者Hubbard, P.A, Pan, X, McNally, R, Ohtaki, A, Honda, S, Kirino, Y, Murali, R.
登録日2017-05-24
公開日2017-06-14
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Structural studies of the Tudor domain from the Bombyx homolog of Drosophila PAPI: Implication to piRNA biogenesis
To Be Published
7LTB
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BU of 7ltb by Molmil
Crystal Structure of Keratinicyclin B
分子名称: (2~{S},4~{S},5~{R},6~{S})-4-azanyl-5-methoxy-6-methyl-oxan-2-ol, 3-ammonio-2,3,6-trideoxy-alpha-L-arabino-hexopyranose-(1-2)-beta-D-glucopyranose, FORMIC ACID, ...
著者Davis, K.M, Jeffrey, P.D, Seyedsayamdost, M.R.
登録日2021-02-19
公開日2022-12-07
最終更新日2024-07-24
実験手法X-RAY DIFFRACTION (0.95 Å)
主引用文献Potent and specific antibiotic combination therapy against Clostridioides difficile.
Nat.Chem.Biol., 20, 2024
7LKC
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BU of 7lkc by Molmil
Crystal Structure of Keratinimicin A
分子名称: (2~{S},4~{S},5~{R},6~{S})-4-azanyl-5-methoxy-6-methyl-oxan-2-ol, CHLORIDE ION, FORMIC ACID, ...
著者Davis, K.M, Jeffrey, P.D, Seyedsayamdost, M.R.
登録日2021-02-02
公開日2022-12-07
最終更新日2024-07-24
実験手法X-RAY DIFFRACTION (0.95 Å)
主引用文献Potent and specific antibiotic combination therapy against Clostridioides difficile.
Nat.Chem.Biol., 20, 2024
6YUU
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BU of 6yuu by Molmil
Crystal structure of M. tuberculosis InhA inhibited by SKTS1
分子名称: 6-[4-(4-hexyl-2-oxidanyl-phenoxy)phenoxy]pyridin-2-ol, CHLORIDE ION, Enoyl-[acyl-carrier-protein] reductase [NADH], ...
著者Eltschkner, S, Schiebel, J, Kehrein, J, Le, T.A, Davoodi, S, Merget, B, Weinrich, J.D, Tonge, P.J, Engels, B, Sotriffer, C.A, Kisker, C.
登録日2020-04-27
公開日2021-03-24
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献A Long Residence Time Enoyl-Reductase Inhibitor Explores an Extended Binding Region with Isoenzyme-Dependent Tautomer Adaptation and Differential Substrate-Binding Loop Closure.
Acs Infect Dis., 7, 2021
5VQH
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BU of 5vqh by Molmil
Crystal structure of the extended Tudor domain from BmPAPI in complex with sDMA
分子名称: N3, N4-DIMETHYLARGININE, Tudor and KH domain-containing protein homolog
著者Hubbard, P.A, Pan, X, Ohtaki, A, McNally, R, Honda, S, Kirino, Y, Murali, R.
登録日2017-05-08
公開日2017-06-14
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural studies of the Tudor domain from the Bombyx homolog of Drosophila PAPI: Implication to piRNA biogenesis
To Be Published
6Z0C
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BU of 6z0c by Molmil
Structure of in silico modelled artificial Maquette-3 protein
分子名称: Maquette-3, POTASSIUM ION
著者Baumgart, M, Roepke, M, Muehlbauer, M.E, Asami, S, Mader, S.L, Fredriksson, K, Groll, M, Gamiz-Hernandez, A.P, Kaila, V.R.I.
登録日2020-05-08
公開日2021-03-17
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Design of buried charged networks in artificial proteins
Nat Commun, 12, 2021
7RTN
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BU of 7rtn by Molmil
Cryo-EM structure of bluetongue virus capsid protein VP5 at low endosomal pH
分子名称: Outer capsid protein VP5
著者Xia, X, Wu, W.N, Cui, Y.X, Roy, P, Zhou, Z.H.
登録日2021-08-13
公開日2021-11-03
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Bluetongue virus capsid protein VP5 perforates membranes at low endosomal pH during viral entry.
Nat Microbiol, 6, 2021
5VSM
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BU of 5vsm by Molmil
Crystal structure of viperin with bound [4Fe-4S] cluster, 5'-deoxyadenosine, and L-methionine
分子名称: 5'-DEOXYADENOSINE, IRON/SULFUR CLUSTER, METHIONINE, ...
著者Fenwick, M.K, Li, Y, Cresswell, P, Modis, Y, Ealick, S.E.
登録日2017-05-11
公開日2017-06-14
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural studies of viperin, an antiviral radical SAM enzyme.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
6Z35
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BU of 6z35 by Molmil
De-novo Maquette 2 protein with buried ion-pair
分子名称: Maquette 2-1ip
著者Baumgart, M, Roepke, M, Muehlbauer, M, Asami, S, Mader, S, Fredriksson, K, Groll, M, Gamiz-Hernandez, A.P, Kaila, V.R.I.
登録日2020-05-19
公開日2021-04-07
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Design of buried charged networks in artificial proteins.
Nat Commun, 12, 2021
6Z5G
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BU of 6z5g by Molmil
The RSL - sulfonato-calix[8]arene complex, I23 form, citrate pH 4.0, solved by S-SAD
分子名称: Fucose-binding lectin protein, GLYCEROL, beta-D-fructopyranose, ...
著者Engilberge, S, Ramberg, K, Crowley, P.B.
登録日2020-05-26
公開日2021-04-14
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.278 Å)
主引用文献Facile Fabrication of Protein-Macrocycle Frameworks.
J.Am.Chem.Soc., 143, 2021
7RTO
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BU of 7rto by Molmil
Cryo-EM structure of bluetongue virus capsid protein VP5 at low endosomal pH intermediate state 2
分子名称: Outer capsid protein VP5
著者Xia, X, Wu, W.N, Cui, Y.X, Roy, P, Zhou, Z.H.
登録日2021-08-13
公開日2021-11-03
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Bluetongue virus capsid protein VP5 perforates membranes at low endosomal pH during viral entry.
Nat Microbiol, 6, 2021

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