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PDB: 45788 件

5HN2
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Base Pairing and Structure Insights into the 5-Formylcytosine in RNA Duplex
分子名称: RNA (5'-R(*GP*UP*AP*(OFC)P*GP*UP*AP*C)-3'), SODIUM ION
著者Luo, Z.P, Sheng, J.
登録日2016-01-18
公開日2016-04-27
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Base pairing and structural insights into the 5-formylcytosine in RNA duplex.
Nucleic Acids Res., 44, 2016
7RHZ
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Heterodimer of Cre recombinase mutants D33A/A36V/R192A and R72E/L115D/R119D in complex with loxP DNA.
分子名称: DNA (44-MER), Recombinase cre
著者Stachowski, K, Foster, M.P.
登録日2021-07-19
公開日2022-01-19
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (4.48 Å)
主引用文献Mechanisms of Cre recombinase synaptic complex assembly and activation illuminated by Cryo-EM.
Nucleic Acids Res., 50, 2022
7M58
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Crystal structure of N1, a member of cis-3-chloroacrylic acid dehalogenase (cis-CaaD) family
分子名称: SULFATE ION, Tautomerase_3 domain-containing protein
著者Medellin, B.P, Moreno, R.Y, Zhang, Y.J.
登録日2021-03-22
公開日2021-06-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Kinetic and Structural Analysis of Two Linkers in the Tautomerase Superfamily: Analysis and Implications.
Biochemistry, 60, 2021
7RLX
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Antibody 2F2 in complex with P. vivax CSP peptide GDRADGQPAGDRAAGQPA
分子名称: 2F2 Fab heavy chain, 2F2 Fab light chain, peptide from Circumsporozoite protein variant VK210
著者Kucharska, I, Julien, J.P.
登録日2021-07-26
公開日2022-01-26
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Structural basis of Plasmodium vivax inhibition by antibodies binding to the circumsporozoite protein repeats.
Elife, 11, 2022
5HNJ
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Base Pairing and Structure Insights into the 5-Formylcytosine in RNA Duplex
分子名称: RNA (5'-R(*GP*UP*AP*(OFC)P*GP*UP*AP*C)-3'), SODIUM ION
著者Luo, Z.P, Sheng, J.
登録日2016-01-18
公開日2016-04-27
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.24 Å)
主引用文献Base pairing and structural insights into the 5-formylcytosine in RNA duplex.
Nucleic Acids Res., 44, 2016
5HUM
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The crystal structure of neuraminidase from A/Sichuan/26221/2014 influenza virus
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, neuraminidase
著者Yang, H, Carney, P.J, Guo, Z, Chang, J.C, Stevens, J.
登録日2016-01-27
公開日2016-04-13
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Molecular Characterizations of Surface Proteins Hemagglutinin and Neuraminidase from Recent H5Nx Avian Influenza Viruses.
J.Virol., 90, 2016
3G2T
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VHS Domain of human GGA1 complexed with SorLA C-terminal Phosphopeptide
分子名称: ADP-ribosylation factor-binding protein GGA1, IODIDE ION, Phosphorylated C-terminal fragment of Sortilin-related receptor
著者Cramer, J.F, Behrens, M.A, Gustafsen, C, Oliveira, C.L.P, Pedersen, J.S, Madsen, P, Petersen, C.M, Thirup, S.S.
登録日2009-02-01
公開日2009-12-15
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献GGA autoinhibition revisited
Traffic, 11, 2010
7MGA
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Concanavalin A bound to a DNA glycoconjugate, Man-AAATTT
分子名称: 3-{[2-(2-hydroxyethoxy)ethyl]amino}-4-[(6-hydroxyhexyl)amino]cyclobut-3-ene-1,2-dione, CALCIUM ION, Concanavalin-A, ...
著者Partridge, B.E, Winegar, P.H, Mirkin, C.A.
登録日2021-04-12
公開日2021-06-16
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Redefining Protein Interfaces within Protein Single Crystals with DNA.
J.Am.Chem.Soc., 143, 2021
7MG5
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Concanavalin A bound to a DNA glycoconjugate, Man-ATAT
分子名称: 3-{[2-(2-hydroxyethoxy)ethyl]amino}-4-[(6-hydroxyhexyl)amino]cyclobut-3-ene-1,2-dione, CALCIUM ION, Concanavalin-A, ...
著者Partridge, B.E, Winegar, P.H, Mirkin, C.A.
登録日2021-04-12
公開日2021-06-16
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Redefining Protein Interfaces within Protein Single Crystals with DNA.
J.Am.Chem.Soc., 143, 2021
5VYR
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Crystal structure of the WbkC formyl transferase from Brucella melitensis
分子名称: (6R)-2-amino-6-methyl-5,6,7,8-tetrahydropteridin-4(3H)-one, 1,2-ETHANEDIOL, CHLORIDE ION, ...
著者Riegert, A.S, Chantigian, D.P, Thoden, J.B, Holden, H.M.
登録日2017-05-26
公開日2017-07-05
最終更新日2020-01-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Biochemical Characterization of WbkC, an N-Formyltransferase from Brucella melitensis.
Biochemistry, 56, 2017
6Z9X
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Human Class I Major Histocompatibility Complex, A02 allele, presenting LLS (t-butyl)Y FGTPT
分子名称: Beta-2-microglobulin, LEU-LEU-SER-TUR-PHE-GLY-THR-PRO-THR, MHC class I antigen, ...
著者Rizkallah, P.J, Man, S, Redman, J.E.
登録日2020-06-04
公開日2021-06-30
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (2.68 Å)
主引用文献Synthetic Peptides with Inadvertent Chemical Modifications Can Activate Potentially Autoreactive T Cells.
J Immunol., 207, 2021
6Z9Z
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Atomic resolution X-ray structure of the Uridine phosphorylase from Vibrio cholerae on crystals grown under microgravity
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Eistrikh-Heller, P.A, Rubinsky, S.V, Samygina, V.R, Gabdulkhakov, A.G, Lashkov, A.A.
登録日2020-06-04
公開日2021-06-30
最終更新日2024-04-10
実験手法X-RAY DIFFRACTION (1.04 Å)
主引用文献Crystallization in Microgravity and the Atomic-Resolution Structure of Uridine Phosphorylase from Vibrio cholerae
Crystallography Reports, 66, 2021
6TPQ
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RNase M5 bound to 50S ribosome with precursor 5S rRNA
分子名称: 50S ribosomal protein L10, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
著者Oerum, S, Dendooven, T, Gilet, L, Catala, M, Degut, C, Trinquier, A, Barraud, P, Luisi, B, Condon, C, Tisne, C.
登録日2019-12-13
公開日2020-09-30
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.07 Å)
主引用文献Structures of B. subtilis Maturation RNases Captured on 50S Ribosome with Pre-rRNAs.
Mol.Cell, 80, 2020
5VY2
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Crystal structure of the F36A mutant of HsNUDT16
分子名称: SODIUM ION, U8 snoRNA-decapping enzyme
著者Thirawatananond, P, Gabelli, S.B.
登録日2017-05-24
公開日2018-11-21
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural analyses of NudT16-ADP-ribose complexes direct rational design of mutants with improved processing of poly(ADP-ribosyl)ated proteins.
Sci Rep, 9, 2019
5HP4
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Crystal structure bacteriohage T5 D15 flap endonuclease (D155K) pseudo-enzyme-product complex with DNA and metal ions
分子名称: CALCIUM ION, DNA (5'-D(*GP*AP*TP*CP*TP*AP*TP*AP*TP*GP*CP*CP*AP*TP*CP*GP*G)-3'), Exodeoxyribonuclease, ...
著者Almalki, F.A, Zhang, J, Sedelnikova, S.E, Rafferty, J.B, Sayers, J.R, Artymiuk, P.A.
登録日2016-01-20
公開日2016-06-01
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Direct observation of DNA threading in flap endonuclease complexes.
Nat.Struct.Mol.Biol., 23, 2016
8B70
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KimA from B. subtilis with nucleotide second-messenger c-di-AMP bound
分子名称: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, DODECYL-BETA-D-MALTOSIDE, POTASSIUM ION, ...
著者Vonck, J, Wieferig, J.P.
登録日2022-09-28
公開日2023-01-18
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Cyclic di-AMP traps proton-coupled K + transporters of the KUP family in an inward-occluded conformation.
Nat Commun, 14, 2023
6TQT
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The crystal structure of the MSP domain of human MOSPD2.
分子名称: 1,2-ETHANEDIOL, Motile sperm domain-containing protein 2, PHOSPHATE ION
著者McEwen, A.G, Poussin-Courmontagne, P, Di Mattia, T, Wendling, C, Cavarelli, J, Tomasetto, C, Alpy, F.
登録日2019-12-17
公開日2020-11-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献FFAT motif phosphorylation controls formation and lipid transfer function of inter-organelle contacts.
Embo J., 39, 2020
7RA9
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Designed StabIL-2 seq1
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Interleukin-2, PHOSPHATE ION
著者Jude, K.M, Chu, A.E, Huang, P.-S, Garcia, K.C.
登録日2021-06-30
公開日2022-03-16
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Interleukin-2 superkines by computational design.
Proc.Natl.Acad.Sci.USA, 119, 2022
5W6F
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Crystal structure of Bacteriophage CBA120 tailspike protein 3 (TSP3, orf212)
分子名称: CHLORIDE ION, tailspike protein 3
著者Plattner, M, Shneider, M.M, Leiman, P.G.
登録日2017-06-16
公開日2018-10-24
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献Structure and Function of the Branched Receptor-Binding Complex of Bacteriophage CBA120.
J.Mol.Biol., 431, 2019
8B71
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Upright KimA dimer with bound c-di-AMP from B. subtilis
分子名称: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, Potassium transporter KimA
著者Vonck, J, Wieferig, J.P.
登録日2022-09-28
公開日2023-01-18
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Cyclic di-AMP traps proton-coupled K + transporters of the KUP family in an inward-occluded conformation.
Nat Commun, 14, 2023
8BE1
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SARS-CoV-2 RBD in complex with a Fab fragment of a neutralising antibody mRBD2
分子名称: Antibody heavy chain, Antibody light chain, SULFATE ION, ...
著者Lulla, A, Brear, P, Fischer, K, Hollfelder, F, Hyvonen, M.
登録日2022-10-21
公開日2023-01-25
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Microfluidics-enabled fluorescence-activated cell sorting of single pathogen-specific antibody secreting cells for the rapid discovery of monoclonal antibodies
Biorxiv, 2023
5W5F
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Cryo-EM structure of the T4 tail tube
分子名称: Tail tube protein gp19
著者Zheng, W, Wang, F, Taylor, N.M, Guerrero-Ferreira, R.C, Leiman, P.G, Egelman, E.H.
登録日2017-06-15
公開日2017-08-16
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Refined Cryo-EM Structure of the T4 Tail Tube: Exploring the Lowest Dose Limit.
Structure, 25, 2017
6ZH0
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Structure of human galactokinase 1 bound with 2-(4-chlorophenyl)-N-(pyrimidin-2-yl)acetamide
分子名称: 2-(1,3-benzoxazol-2-ylamino)spiro[1,6,7,8-tetrahydroquinazoline-4,1'-cyclohexane]-5-one, Galactokinase, N-(3-chlorophenyl)-2,2,2-trifluoroacetamide, ...
著者Mackinnon, S.R, Bezerra, G.A, Zhang, M, Foster, W, Krojer, T, Brandao-Neto, J, Douangamath, A, Arrowsmith, C, Edwards, A, Bountra, C, Brennan, P, Lai, K, Yue, W.W.
登録日2020-06-20
公開日2022-06-01
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Fragment Screening Reveals Starting Points for Rational Design of Galactokinase 1 Inhibitors to Treat Classic Galactosemia.
Acs Chem.Biol., 16, 2021
8RUF
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Crystal structure of Rhizobium etli L-asparaginase ReAV D187A mutant
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, ...
著者Pokrywka, K, Grzechowiak, M, Sliwiak, J, Worsztynowicz, P, Loch, J.I, Ruszkowski, M, Gilski, M, Jaskolski, M.
登録日2024-01-30
公開日2024-04-17
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Probing the active site of Class 3 L-asparaginase by mutagenesis. I. Tinkering with the zinc coordination site of ReAV.
Front Chem, 12, 2024
8RUA
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Crystal structure of Rhizobium etli L-asparaginase ReAV C135A mutant
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, ...
著者Pokrywka, K, Grzechowiak, M, Sliwiak, J, Worsztynowicz, P, Loch, J.I, Ruszkowski, M, Gilski, M, Jaskolski, M.
登録日2024-01-30
公開日2024-04-17
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Probing the active site of Class 3 L-asparaginase by mutagenesis. I. Tinkering with the zinc coordination site of ReAV.
Front Chem, 12, 2024

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