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PDB: 45955 件

2R1H
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met-Trout IV hemoglobin at pH 6.3
分子名称: 1,2-ETHANEDIOL, Hemoglobin subunit alpha-4, Hemoglobin subunit beta-4, ...
著者Aranda IV, R, Worley, C.E, Richards, M.P, Phillips Jr, G.N.
登録日2007-08-22
公開日2008-09-02
最終更新日2013-01-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural analysis of fish versus mammalian hemoglobins: Effect of the heme pocket environment on autooxidation and hemin loss.
Proteins, 75, 2008
2QLX
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Crystal structure of rhamnose mutarotase RhaU of Rhizobium leguminosarum in complex with L-Rhamnose
分子名称: FORMIC ACID, L-rhamnose mutarotase, MAGNESIUM ION, ...
著者Carpena, X, Loewen, P.C.
登録日2007-07-13
公開日2008-12-02
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献RhaU of Rhizobium leguminosarum is a rhamnose mutarotase.
J.Bacteriol., 190, 2008
2QM8
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MeaB, A Bacterial Homolog of MMAA, in the Nucleotide Free Form
分子名称: GTPase/ATPase, PHOSPHATE ION
著者Hubbard, P.A, Padovani, D, Labunska, T, Mahlstedt, S.A, Banerjee, R, Drennan, C.L.
登録日2007-07-14
公開日2007-08-28
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure and mutagenesis of the metallochaperone MeaB: insight into the causes of methylmalonic aciduria.
J.Biol.Chem., 282, 2007
2KEG
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NMR structure of Plantaricin K in DPC-micelles
分子名称: PlnK
著者Rogne, P, Haugen, M, Fimland, G, Nissen-Meyer, J, Kristiansen, P.
登録日2009-01-30
公開日2009-07-07
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Three-dimensional structure of the two-peptide bacteriocin plantaricin JK.
Peptides, 30, 2009
2K8T
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Solution NMR structure of trans-4-hydroxynonenal derived dG adduct of (6R,8S,11R)-configuration opposite dC
分子名称: (2S,5R)-5-pentyltetrahydrofuran-2-ol, 5'-D(*DGP*DCP*DTP*DAP*DGP*DCP*DGP*DAP*DGP*DTP*DCP*DC)-3', 5'-D(*DGP*DGP*DAP*DCP*DTP*DCP*DGP*DCP*DTP*DAP*DGP*DC)-3'
著者Huang, H, Wang, H, Qi, N, Lloyd, R.S, Rizzo, C.J, Stone, M.P.
登録日2008-09-23
公開日2008-11-04
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献The stereochemistry of trans-4-hydroxynonenal-derived exocyclic 1,N2-2'-deoxyguanosine adducts modulates formation of interstrand cross-links in the 5'-CpG-3' sequence.
Biochemistry, 47, 2008
2KAE
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data-driven model of MED1:DNA complex
分子名称: 5'-D(*DCP*DGP*DGP*DAP*DAP*DAP*DAP*DGP*DTP*DAP*DTP*DAP*DCP*DTP*DTP*DTP*DTP*DCP*DCP*DG)-3', GATA-type transcription factor, ZINC ION
著者Lowry, J.A, Gamsjaeger, R, Thong, S, Hung, W, Kwan, A.H, Broitman-Maduro, G, Matthews, J.M, Maduro, M, Mackay, J.P.
登録日2008-11-04
公開日2009-01-06
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structural Analysis of MED-1 Reveals Unexpected Diversity in the Mechanism of DNA Recognition by GATA-type Zinc Finger Domains.
J.Biol.Chem., 284, 2009
2KAR
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HNE-dG adduct mismatched with dA in acidic solution
分子名称: (4S)-nonane-1,4-diol, 5'-D(*DGP*DCP*DTP*DAP*DGP*DCP*DGP*DAP*DGP*DTP*DCP*DC)-3', 5'-D(*DGP*DGP*DAP*DCP*DTP*DAP*DGP*DCP*DTP*DAP*DGP*DC)-3'
著者Huang, H, Wang, H, Lloyd, R.S, Rizzo, C.J, Stone, M.P.
登録日2008-11-13
公開日2009-05-26
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Conformational interconversion of the trans-4-hydroxynonenal-derived (6S,8R,11S) 1,N(2)-deoxyguanosine adduct when mismatched with deoxyadenosine in DNA
Chem.Res.Toxicol., 22, 2009
2QLP
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Bifunctional dCTP deaminase:dUTPase from Mycobacterium tuberculosis, apo form
分子名称: Deoxycytidine triphosphate deaminase, PENTAETHYLENE GLYCOL
著者Christophersen, S, Harris, P, Willemoes, M.
登録日2007-07-13
公開日2008-02-19
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.47 Å)
主引用文献Mechanism of dTTP inhibition of the bifunctional dCTP deaminase:dUTPase encoded by Mycobacterium tuberculosis
J.Mol.Biol., 376, 2007
2FI3
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Crystal structure of a BPTI variant (Cys14->Ser, Cys38->Ser) in complex with trypsin
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, Cationic trypsin, ...
著者Zakharova, E, Horvath, M.P, Goldenberg, D.P.
登録日2005-12-27
公開日2006-01-24
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Functional and structural roles of the Cys14-Cys38 disulfide of bovine pancreatic trypsin inhibitor.
J.Mol.Biol., 382, 2008
2KRQ
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Solution structure of the tRNA-Arg2 (ICG) ASL.
分子名称: RNA (5'-R(*CP*UP*CP*GP*GP*CP*UP*IP*CP*GP*AP*AP*CP*CP*GP*AP*G)-3')
著者Bilbille, Y, Agris, P.F.
登録日2009-12-22
公開日2010-12-01
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution structure of the tRNA-Arg2 (ICG) ASL
To be Published
2KR5
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Solution Structure of an Acyl Carrier Protein Domain from Fungal Type I Polyketide Synthase
分子名称: 4'-PHOSPHOPANTETHEINE, Aflatoxin biosynthesis polyketide synthase
著者Wattana-amorn, P, Williams, C, Ploskon, E, Cox, R.J, Simpson, T.J, Crosby, J, Crump, M.P.
登録日2009-12-03
公開日2010-03-02
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of an acyl carrier protein domain from a fungal type I polyketide synthase.
Biochemistry, 49, 2010
7Z6N
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Crystal structure of Zn2+-transporter BbZIP in a metal-stripped state
分子名称: Putative membrane protein, SULFATE ION
著者Wiuf, A, Steffen, J.H, Becares, E.R, Groenberg, C, Mahato, D.R, Rasmussen, S.G.F, Andersson, M, Croll, T, Gotfryd, K, Gourdon, P.
登録日2022-03-13
公開日2022-08-10
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.57 Å)
主引用文献The two-domain elevator-type mechanism of zinc-transporting ZIP proteins.
Sci Adv, 8, 2022
5X41
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3.5A resolution structure of a cobalt energy-coupling factor transporter using LCP method-CbiMQO
分子名称: Cobalt ABC transporter ATP-binding protein, Cobalt transport protein CbiM, Uncharacterized protein CbiQ
著者Bao, Z, Qi, X, Zhao, W, Li, D, Zhang, P.
登録日2017-02-09
公開日2017-04-19
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (3.47 Å)
主引用文献Structure and mechanism of a group-I cobalt energy coupling factor transporter
Cell Res., 27, 2017
5X40
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Structure of a CbiO dimer bound with AMPPCP
分子名称: Cobalt ABC transporter ATP-binding protein, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER
著者Bao, Z, Qi, X, Wang, J, Zhang, P.
登録日2017-02-09
公開日2017-04-05
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structure and mechanism of a group-I cobalt energy coupling factor transporter
Cell Res., 27, 2017
7Z6M
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Crystal structure of Zn2+-transporter BbZIP in a cadmium bound state
分子名称: CADMIUM ION, Putative membrane protein
著者Wiuf, A, Steffen, J.H, Becares, E.R, Groenberg, C, Mahato, D.R, Rasmussen, S.G.F, Andersson, M, Croll, T, Gotfryd, K, Gourdon, P.
登録日2022-03-13
公開日2022-08-10
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献The two-domain elevator-type mechanism of zinc-transporting ZIP proteins.
Sci Adv, 8, 2022
1QAC
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CHANGE IN DIMERIZATION MODE BY REMOVAL OF A SINGLE UNSATISFIED POLAR RESIDUE
分子名称: IMMUNOGLOBULIN LIGHT CHAIN VARIABLE DOMAIN
著者Pokkuluri, P.R, Cai, X, Johnson, G, Stevens, F.J, Schiffer, M.
登録日1999-02-25
公開日2000-02-23
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Change in dimerization mode by removal of a single unsatisfied polar residue located at the interface.
Protein Sci., 9, 2000
6HPF
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BU of 6hpf by Molmil
Structure of Inactive E165Q mutant of fungal non-CBM carrying GH26 endo-b-mannanase from Yunnania penicillata in complex with alpha-62-61-di-galactosyl-mannotriose
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETIC ACID, CHLORIDE ION, ...
著者von Freiesleben, P, Moroz, O.V, Blagova, E, Wiemann, M, Spodsberg, N, Agger, J.W, Davies, G.J, Wilson, K.S, Stalbrand, H, Meyer, A.S, Krogh, K.B.R.M.
登録日2018-09-20
公開日2019-03-06
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.36 Å)
主引用文献Crystal structure and substrate interactions of an unusual fungal non-CBM carrying GH26 endo-beta-mannanase from Yunnania penicillata.
Sci Rep, 9, 2019
5D6I
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DgkA - CIM
分子名称: Diacylglycerol kinase
著者Ma, P, Caffrey, M.
登録日2015-08-12
公開日2016-08-17
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.091 Å)
主引用文献The cubicon method for concentrating membrane proteins in the cubic mesophase.
Nat Protoc, 12, 2017
2QTJ
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Solution structure of human dimeric immunoglobulin A
分子名称: Ig alpha-1 chain C region, Kappa light chain IgA1
著者Bonner, A, Furtado, P.B, Almogren, A, Kerr, M.A, Perkins, S.J.
登録日2007-08-02
公開日2008-01-22
最終更新日2024-02-21
実験手法SOLUTION SCATTERING
主引用文献Implications of the near-planar solution structure of human myeloma dimeric IgA1 for mucosal immunity and IgA nephropathy
J.Immunol., 180, 2008
6D3X
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Highly Potent and Selective Plasmin Inhibitors Based on the Sunflower Trypsin Inhibitor-1 Scaffold Attenuate Fibrinolysis in Plasma
分子名称: Plasminogen, Trypsin inhibitor 1
著者Law, R.H.P, Wu, G.
登録日2018-04-17
公開日2019-01-23
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Highly Potent and Selective Plasmin Inhibitors Based on the Sunflower Trypsin Inhibitor-1 Scaffold Attenuate Fibrinolysis in Plasma.
J. Med. Chem., 62, 2019
6D7R
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Crystal structure of an inactivate variant of the quorum-sensing master regulator HapR from protease-deficient non-O1, non-O139 Vibrio cholerae strain V2
分子名称: Hemagglutinin/protease regulatory protein
著者Cruite, J.T, Succo, P, Raychaudhuri, S, Kull, F.J.
登録日2018-04-25
公開日2018-05-30
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of an inactive variant of the quorum-sensing master regulator HapR from the protease-deficient non-O1, non-O139 Vibrio cholerae strain V2.
Acta Crystallogr F Struct Biol Commun, 74, 2018
6D7Y
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1.75 Angstrom Resolution Crystal Structure of the Toxic C-Terminal Tip of CdiA from Pseudomonas aeruginosa in Complex with Immune Protein
分子名称: Hemagglutinin, immune protein
著者Minasov, G, Shuvalova, L, Wawrzak, Z, Kiryukhina, O, Allen, J.P, Hauser, A.R, Anderson, W.F, Satchell, K.J.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2018-04-25
公開日2019-05-01
最終更新日2020-04-15
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献A comparative genomics approach identifies contact-dependent growth inhibition as a virulence determinant.
Proc.Natl.Acad.Sci.USA, 117, 2020
5XC0
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Crystal structure of an aromatic mutant (W6A) of an alkali thermostable GH10 Xylanase from Bacillus sp. NG-27
分子名称: Beta-xylanase, MAGNESIUM ION, SODIUM ION
著者Bansia, H, Mahanta, P, Ramakumar, S.
登録日2017-03-21
公開日2018-03-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献Small Glycols Discover Cryptic Pockets on Proteins for Fragment-Based Approaches.
J.Chem.Inf.Model., 2021
5ZQ6
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SidE-Ubi-ADPr
分子名称: ADENOSINE-5'-DIPHOSPHATE, SidE, Ubiquitin
著者Wang, Y, Gao, A, Gao, P.
登録日2018-04-17
公開日2018-05-23
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.009 Å)
主引用文献Structural Insights into Non-canonical Ubiquitination Catalyzed by SidE.
Cell, 173, 2018
7Z4F
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Tail of phage SU10 genome release intermediate
分子名称: Adaptor protein, Portal protein, Putative structural protein, ...
著者Siborova, M, Fuzik, T, Prochazkova, M, Novacek, J, Plevka, P.
登録日2022-03-03
公開日2022-08-17
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Tail proteins of phage SU10 reorganize into the nozzle for genome delivery.
Nat Commun, 13, 2022

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