Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 45955 件

3ZH0
DownloadVisualize
BU of 3zh0 by Molmil
Functional and structural role of the N-terminal extension in Methanosarcina acetivorans protoglobin
分子名称: FORMIC ACID, GLYCEROL, PROTOGLOBIN, ...
著者Ciaccio, C, Pesce, A, Tundo, G.R, Tilleman, L, Dewilde, S, Moens, L, Ascenzi, P, Bolognesi, M, Nardini, M, Coletta, M.
登録日2012-12-19
公開日2013-03-27
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Functional and Structural Role of the N-Terminal Extension in Methanosarcina Acetivorans Protoglobin.
Biochim.Biophys.Acta, 1834, 2013
6PSI
DownloadVisualize
BU of 6psi by Molmil
Structural Basis for Client Recognition and Activity of Hsp40 Chaperones
分子名称: Alkaline phosphatase, Chaperone protein DnaJ 2
著者Jiang, Y, Rossi, P, Kalodimos, C.G.
登録日2019-07-12
公開日2019-09-18
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural basis for client recognition and activity of Hsp40 chaperones.
Science, 365, 2019
7TXK
DownloadVisualize
BU of 7txk by Molmil
Crystal structure of EgtU solute binding domain from Streptococcus pneumoniae D39 in complex with L-ergothioneine
分子名称: 1,2-ETHANEDIOL, Choline transporter (Glycine betaine transport system permease protein), SULFATE ION, ...
著者Zhang, Y, Gonzalez-Gutierrez, G, Giedroc, D.P.
登録日2022-02-09
公開日2022-12-21
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Discovery and structure of a widespread bacterial ABC transporter specific for ergothioneine.
Nat Commun, 13, 2022
3ZK7
DownloadVisualize
BU of 3zk7 by Molmil
CRYSTAL STRUCTURE OF PNEUMOCOCCAL SURFACE ANTIGEN PSAA IN THE METAL-FREE, OPEN STATE
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, MANGANESE ABC TRANSPORTER SUBSTRATE-BINDING LIPOPROTEIN
著者Counago, R.M, Ween, M.P, Bajaj, M, Zuegg, J, Cooper, M.A, McEwan, A.G, Paton, J.C, Kobe, B, McDevitt, C.A.
登録日2013-01-22
公開日2013-11-06
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Imperfect coordination chemistry facilitates metal ion release in the Psa permease.
Nat. Chem. Biol., 10, 2014
2W7G
DownloadVisualize
BU of 2w7g by Molmil
Crystal structure of Y51FbsSHMT L-allo-Threonine extrnal aldimine
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ALLO-THREONINE, PHOSPHATE ION, ...
著者Rajaram, V, Bhavani, B.S, Bisht, S, Kaul, P, Prakash, V, Appaji Rao, N, Savithri, H.S, Murthy, M.R.N.
登録日2008-12-22
公開日2010-08-18
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Importance of Tyrosine Residues of Bacillus Stearothermophilus Serine Hydroxymethyltransferase in Cofactor Binding and L-Allo-Thr Cleavage.
FEBS J., 275, 2008
1VYR
DownloadVisualize
BU of 1vyr by Molmil
Structure of pentaerythritol tetranitrate reductase complexed with picric acid
分子名称: FLAVIN MONONUCLEOTIDE, PENTAERYTHRITOL TETRANITRATE REDUCTASE, PICRIC ACID
著者Barna, T, Moody, P.C.E.
登録日2004-05-05
公開日2004-06-10
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (0.9 Å)
主引用文献Atomic Resolution Structures and Solution Behavior of Enzyme-Substrate Complexes of Enterobacter Cloacae Pb2 Pentaerythritol Tetranitrate Reductase: Multiple Conformational States and Implications for the Mechanism of Nitroaromatic Explosive Degradation
J.Biol.Chem., 279, 2004
4ZWU
DownloadVisualize
BU of 4zwu by Molmil
Crystal structure of organophosphate anhydrolase/prolidase mutant Y212F, V342L, I215Y
分子名称: BARIUM ION, GLYCEROL, GLYCOLIC ACID, ...
著者Daczkowski, C.M, Pegan, S.D, Harvey, S.P.
登録日2015-05-19
公開日2015-10-14
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Engineering the Organophosphorus Acid Anhydrolase Enzyme for Increased Catalytic Efficiency and Broadened Stereospecificity on Russian VX.
Biochemistry, 54, 2015
5MJ4
DownloadVisualize
BU of 5mj4 by Molmil
INTERLEUKIN-23 COMPLEX WITH AN ANTAGONISTIC ALPHABODY, CRYSTAL FORM 2
分子名称: ALPHABODY MA12, Interleukin-12 subunit beta, Interleukin-23 subunit alpha, ...
著者Desmet, J, Verstraete, K, Bloch, Y, Lorent, E, Wen, Y, Devreese, B, Vandenbroucke, K, Loverix, S, Hettmann, T, Deroo, S, Somers, K, Henderikx, P, Lasters, I, Savvides, S.
登録日2016-11-29
公開日2017-01-11
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献STRUCTURAL BASIS OF IL-23 ANTAGONISM BY AN ALPHABODY PROTEIN
Nature Communications, 5, 2014
4Y0X
DownloadVisualize
BU of 4y0x by Molmil
Crystal structure of the S/T protein kinase PknG from Mycobacterium tuberculosis in complex with ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Serine/threonine-protein kinase PknG, ...
著者Lisa, M.N, Alzari, P.M.
登録日2015-02-06
公開日2015-05-20
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Molecular Basis of the Activity and the Regulation of the Eukaryotic-like S/T Protein Kinase PknG from Mycobacterium tuberculosis.
Structure, 23, 2015
1AOL
DownloadVisualize
BU of 1aol by Molmil
FRIEND MURINE LEUKEMIA VIRUS RECEPTOR-BINDING DOMAIN
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, GP70, ZINC ION
著者Fass, D, Davey, R.A, Hamson, C.A, Kim, P.S, Cunningham, J.M, Berger, J.M.
登録日1997-07-08
公開日1997-10-15
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of a murine leukemia virus receptor-binding glycoprotein at 2.0 angstrom resolution.
Science, 277, 1997
5MKP
DownloadVisualize
BU of 5mkp by Molmil
Non redox thiolation in transfer RNAs occuring via sulfur activation by a [4Fe-4S] cluster
分子名称: Fe4 H S5, PH0300, ZINC ION
著者Arragain, S, Bimai, O, Legrand, P, Golinelli-Pimpaneau, B.
登録日2016-12-05
公開日2017-06-14
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Nonredox thiolation in tRNA occurring via sulfur activation by a [4Fe-4S] cluster.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
2NRY
DownloadVisualize
BU of 2nry by Molmil
Crystal structure of IRAK-4
分子名称: STAUROSPORINE, interleukin-1 receptor-associated kinase 4
著者Wang, Z, Liu, J, Walker, N.P.C.
登録日2006-11-02
公開日2006-12-12
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Crystal structures of IRAK-4 kinase in complex with inhibitors: a serine/threonine kinase with tyrosine as a gatekeeper.
Structure, 14, 2006
1NQH
DownloadVisualize
BU of 1nqh by Molmil
OUTER MEMBRANE COBALAMIN TRANSPORTER (BTUB) FROM E. COLI, WITH BOUND CALCIUM AND CYANOCOBALAMIN (VITAMIN B12) SUBSTRATE
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, CALCIUM ION, CYANOCOBALAMIN, ...
著者Chimento, D.P, Mohanty, A.K, Kadner, R.J, Wiener, M.C.
登録日2003-01-21
公開日2003-04-29
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Substrate-induced transmembrane signaling in the cobalamin transporter BtuB
Nat.Struct.Biol., 10, 2003
1HLO
DownloadVisualize
BU of 1hlo by Molmil
THE CRYSTAL STRUCTURE OF AN INTACT HUMAN MAX-DNA COMPLEX: NEW INSIGHTS INTO MECHANISMS OF TRANSCRIPTIONAL CONTROL
分子名称: DNA (5'-D(*AP*CP*CP*AP*CP*GP*TP*GP*GP*TP*G)-3'), DNA (5'-D(*CP*AP*CP*CP*AP*CP*GP*TP*GP*GP*T)-3'), PROTEIN (TRANSCRIPTION FACTOR MAX)
著者Brownlie, P, Ceska, T.A, Lamers, M, Romier, C, Theo, H, Suck, D.
登録日1997-09-10
公開日1997-10-27
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The crystal structure of an intact human Max-DNA complex: new insights into mechanisms of transcriptional control.
Structure, 5, 1997
2W4L
DownloadVisualize
BU of 2w4l by Molmil
Human dCMP deaminase
分子名称: CHLORIDE ION, DEOXYCYTIDYLATE DEAMINASE, ZINC ION
著者Siponen, M.I, Moche, M, Arrowsmith, C.H, Berglund, H, Bountra, C, Collins, R, Dahlgren, L.G, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, A, Johansson, I, Karlberg, T, Kotenyova, T, Lehtio, L, Nilsson, M.E, Nyman, T, Persson, C, Sagemark, J, Schuler, H, Thorsell, A.G, Tresaugues, L, Van Den Berg, S, Weigelt, J, Welin, M, Wikstrom, M, Wisniewska, M, Nordlund, P.
登録日2008-11-28
公開日2009-01-13
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The Crystal Structure of Human Dcmp Deaminase
To be Published
2YOW
DownloadVisualize
BU of 2yow by Molmil
Bacillus amyloliquefaciens CBM33
分子名称: RBAM17540
著者Hemsworth, G.R, Taylor, E.J, Kim, R.Q, Lewis, S.J, Turkenburg, J.P, Davies, G.J, Walton, P.H.
登録日2012-10-29
公開日2013-04-10
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The Copper Active Site of Cbm33 Polysaccharide Oxygenases.
J.Am.Chem.Soc., 135, 2013
3ZCZ
DownloadVisualize
BU of 3zcz by Molmil
Crystal structure of a complex between Actinomadura R39 DD-peptidase and a trifluoroketone inhibitor
分子名称: (2R)-2-amino-7-oxo-7-{[(2R,3S)-4,4,4-trifluoro-3-hydroxybutan-2-yl]amino}heptanoic acid, D-ALANYL-D-ALANINE CARBOXYPEPTIDASE, MAGNESIUM ION, ...
著者Sauvage, E, Herman, R, Kerff, F, Rocaboy, M, Charlier, P.
登録日2012-11-23
公開日2013-03-27
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Inhibition of Dd-Peptidases by a Specific Trifluoroketone: Crystal Structure of a Complex with the Actinomadura R39 Dd-Peptidase.
Biochemistry, 52, 2013
5MRD
DownloadVisualize
BU of 5mrd by Molmil
Human PDK1-PKCiota Kinase Chimera in Complex with Allosteric Compound PS267 Bound to the PIF-Pocket
分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 3-phosphoinositide-dependent protein kinase 1, ADENOSINE-5'-TRIPHOSPHATE, ...
著者Arencibia, J.M, Froehner, W, Krupa, M, Pastor-Flores, D, Merker, P, Oellerich, T, Neimanis, S, Schmithals, C, Koeberle, V, Suess, E, Zeuzem, S, Stark, H, Piiper, A, Odadzic, D, Schulze, J.O, Biondi, R.M.
登録日2016-12-22
公開日2017-01-18
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.41 Å)
主引用文献An Allosteric Inhibitor Scaffold Targeting the PIF-Pocket of Atypical Protein Kinase C Isoforms.
ACS Chem. Biol., 12, 2017
8ILR
DownloadVisualize
BU of 8ilr by Molmil
Cryo-EM structure of PI3Kalpha in complex with compound 16
分子名称: N-[(2S)-1-(ethylamino)-1-oxidanylidene-3-[4-(2-quinoxalin-6-ylethynyl)phenyl]propan-2-yl]-2,3-dimethyl-quinoxaline-6-carboxamide, Phosphatidylinositol 3-kinase regulatory subunit alpha, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform
著者Zhou, Q, Liu, X, Neri, D, Li, W, Favalli, N, Bassi, G, Yang, S, Yang, D, Vogt, P.K, Wang, M.-W.
登録日2023-03-04
公開日2023-08-30
実験手法ELECTRON MICROSCOPY (3.05 Å)
主引用文献Structural insights into the interaction of three Y-shaped ligands with PI3K alpha.
Proc.Natl.Acad.Sci.USA, 120, 2023
2CAG
DownloadVisualize
BU of 2cag by Molmil
CATALASE COMPOUND II
分子名称: CATALASE COMPOUND II, PROTOPORPHYRIN IX CONTAINING FE
著者Gouet, P, Jouve, H.M, Hajdu, J.
登録日1996-06-12
公開日1996-12-07
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Ferryl intermediates of catalase captured by time-resolved Weissenberg crystallography and UV-VIS spectroscopy.
Nat.Struct.Biol., 3, 1996
5MS1
DownloadVisualize
BU of 5ms1 by Molmil
Cowpea mosaic virus top component (CPMV-T) - naturally occurring empty particles
分子名称: Large subunit of Cowpea music virus, Small subunit of cowpea mosaic virus
著者Hesketh, E.L, Meshcheriakova, Y, Thompson, R.F, Lomonossoff, G.P, Ranson, N.A.
登録日2016-12-29
公開日2017-07-19
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (4.25 Å)
主引用文献The structures of a naturally empty cowpea mosaic virus particle and its genome-containing counterpart by cryo-electron microscopy.
Sci Rep, 7, 2017
2NX9
DownloadVisualize
BU of 2nx9 by Molmil
Crystal structure of the carboxyltransferase domain of the oxaloacetate decarboxylase Na+ pump from Vibrio cholerae
分子名称: Oxaloacetate decarboxylase 2, subunit alpha, ZINC ION
著者Studer, R, Dimroth, P.
登録日2006-11-17
公開日2006-12-26
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal Structure of the Carboxyltransferase Domain of the Oxaloacetate Decarboxylase Na(+) Pump from Vibrio cholerae.
J.Mol.Biol., 367, 2007
5MSH
DownloadVisualize
BU of 5msh by Molmil
Cowpea mosaic virus top component (CPMV-T) - naturally occurring empty particles
分子名称: Cowpea mosaic virus large subunit, Cowpea mosaic virus small subunit
著者Hesketh, E.L, Meshcheriakova, Y, Thompson, R.F, Lomonossoff, G.P, Ranson, N.A.
登録日2017-01-04
公開日2017-07-19
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (4.25 Å)
主引用文献The structures of a naturally empty cowpea mosaic virus particle and its genome-containing counterpart by cryo-electron microscopy.
Sci Rep, 7, 2017
1FFG
DownloadVisualize
BU of 1ffg by Molmil
CHEY-BINDING DOMAIN OF CHEA IN COMPLEX WITH CHEY AT 2.1 A RESOLUTION
分子名称: CHEMOTAXIS PROTEIN CHEA, CHEMOTAXIS PROTEIN CHEY, MANGANESE (II) ION
著者Gouet, P, Chinardet, N, Welch, M, Guillet, V, Birck, C, Mourey, L, Samama, J.-P.
登録日2000-07-25
公開日2001-01-17
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Further insights into the mechanism of function of the response regulator CheY from crystallographic studies of the CheY--CheA(124--257) complex.
Acta Crystallogr.,Sect.D, 57, 2001
6Y5W
DownloadVisualize
BU of 6y5w by Molmil
Crystal structure of the envelope glycoprotein complex of Andes virus in a near postfusion conformation
分子名称: Envelope polyprotein,Envelope polyprotein, alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Serris, A, Rey, F.A, Guardado-Calvo, P.
登録日2020-02-26
公開日2020-10-14
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献The Hantavirus Surface Glycoprotein Lattice and Its Fusion Control Mechanism.
Cell, 183, 2020

224004

件を2024-08-21に公開中

PDB statisticsPDBj update infoContact PDBjnumon