Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 45955 results

8H94
DownloadVisualize
BU of 8h94 by Molmil
Structure of mouse SCMC bound with KH domain of FILIA
Descriptor: NACHT, LRR and PYD domains-containing protein 5, Oocyte-expressed protein homolog, ...
Authors:Chi, P, Ou, G, Han, Z, Li, J, Deng, D.
Deposit date:2022-10-24
Release date:2024-01-10
Last modified:2024-01-31
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural basis of the subcortical maternal complex and its implications in reproductive disorders.
Nat.Struct.Mol.Biol., 31, 2024
3VNJ
DownloadVisualize
BU of 3vnj by Molmil
Crystal structures of D-Psicose 3-epimerase with D-psicose from Clostridium cellulolyticum H10
Descriptor: D-psicose, MANGANESE (II) ION, Xylose isomerase domain protein TIM barrel
Authors:Chan, H.C, Zhu, Y, Hu, Y, Ko, T.P, Huang, C.H, Ren, F, Chen, C.C, Guo, R.T, Sun, Y.
Deposit date:2012-01-16
Release date:2012-08-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Crystal structures of D-psicose 3-epimerase from Clostridium cellulolyticum H10 and its complex with ketohexose sugars.
Protein Cell, 3, 2012
8H96
DownloadVisualize
BU of 8h96 by Molmil
Structure of mouse SCMC core complex
Descriptor: NACHT, LRR and PYD domains-containing protein 5, Oocyte-expressed protein homolog, ...
Authors:Chi, P, Ou, G, Li, J, Han, Z, Deng, D.
Deposit date:2022-10-24
Release date:2024-01-10
Last modified:2024-01-31
Method:ELECTRON MICROSCOPY (2.78 Å)
Cite:Structural basis of the subcortical maternal complex and its implications in reproductive disorders.
Nat.Struct.Mol.Biol., 31, 2024
1OJ8
DownloadVisualize
BU of 1oj8 by Molmil
Novel and retro Binding Modes in Cytotoxic Ribonucleases from Rana catesbeiana of Two Crystal Structures Complexed with d(ApCpGpA) and (2',5'CpG)
Descriptor: 5'-D(*AP*CP*GP*AP)-3', RC-RNASE6 RIBONUCLEASE, SULFATE ION
Authors:Tsai, C.-J, Liu, J.-H, Liao, Y.-D, Chen, L.-Y, Cheng, P.-T, Sun, Y.-J.
Deposit date:2003-07-07
Release date:2004-07-15
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Retro and Novel Binding Modes in Cytotoxic Ribonucleases from Rana Catesbeiana of Two Crystal Structures Complexed with (2',5'Cpg) and D(Apcpgpa)
To be Published
2ZDO
DownloadVisualize
BU of 2zdo by Molmil
Crystal structure of IsdG-N7A in complex with hemin
Descriptor: Heme-degrading monooxygenase isdG, PROTOPORPHYRIN IX CONTAINING FE
Authors:Lee, W.C, Reniere, M.L, Skaar, E.P, Murphy, M.E.P.
Deposit date:2007-11-27
Release date:2008-08-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Ruffling of Metalloporphyrins Bound to IsdG and IsdI, Two Heme-degrading Enzymes in Staphylococcus aureus
J.Biol.Chem., 283, 2008
5KQY
DownloadVisualize
BU of 5kqy by Molmil
Protease E35D-DRV
Descriptor: (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, Protease E35D-DRV
Authors:Liu, Z, Poole, K.M, Mahon, B.P, McKenna, R, Fanucci, G.E.
Deposit date:2016-07-06
Release date:2016-09-21
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Effects of Hinge-region Natural Polymorphisms on Human Immunodeficiency Virus-Type 1 Protease Structure, Dynamics, and Drug Pressure Evolution.
J.Biol.Chem., 291, 2016
3NK6
DownloadVisualize
BU of 3nk6 by Molmil
Structure of the Nosiheptide-resistance methyltransferase
Descriptor: 23S rRNA methyltransferase
Authors:Yang, H, Wang, Z, Shen, Y, Wang, P, Murchie, A, Xu, Y.
Deposit date:2010-06-18
Release date:2010-07-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of the Nosiheptide-Resistance Methyltransferase of Streptomyces actuosus
Biochemistry, 49, 2010
8H95
DownloadVisualize
BU of 8h95 by Molmil
Structure of mouse SCMC bound with full-length FILIA
Descriptor: NACHT, LRR and PYD domains-containing protein 5, Oocyte-expressed protein homolog, ...
Authors:Chi, P, Ou, G, Han, Z, Li, L, Deng, D.
Deposit date:2022-10-24
Release date:2024-01-10
Last modified:2024-01-31
Method:ELECTRON MICROSCOPY (3.38 Å)
Cite:Structural basis of the subcortical maternal complex and its implications in reproductive disorders.
Nat.Struct.Mol.Biol., 31, 2024
2MIS
DownloadVisualize
BU of 2mis by Molmil
NMR Localization of Divalent Cations at the Active Site of the Neurospora VS Ribozyme Provides Insights Into RNA-Metal Ion Interactions
Descriptor: MAGNESIUM ION, VS Ribozyme
Authors:Bonneau, E, Legault, P.
Deposit date:2013-12-19
Release date:2014-01-22
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:NMR Localization of Divalent Cations at the Active Site of the Neurospora VS Ribozyme Provides Insights into RNA-Metal-Ion Interactions.
Biochemistry, 53, 2014
4D80
DownloadVisualize
BU of 4d80 by Molmil
Metallosphera sedula Vps4 crystal structure
Descriptor: AAA ATPASE, CENTRAL DOMAIN PROTEIN
Authors:Caillat, C, Macheboeuf, P, Wu, Y, McCarthy, A.A, Boeri-Erba, E, Effantin, G, Gottlinger, H.G, Weissenhorn, W, Renesto, P.
Deposit date:2014-12-02
Release date:2015-10-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Asymmetric Ring Structure of Vps4 Required for Escrt-III Disassembly.
Nat.Commun., 6, 2015
7T40
DownloadVisualize
BU of 7t40 by Molmil
Structure of MERS 3CL protease in complex with inhibitor 10c
Descriptor: (1R,2S)-1-hydroxy-2-{[N-({[7-(methanesulfonyl)-7-azaspiro[3.5]nonan-2-yl]oxy}carbonyl)-L-leucyl]amino}-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid, (1S,2S)-1-hydroxy-2-{[N-({[7-(methanesulfonyl)-7-azaspiro[3.5]nonan-2-yl]oxy}carbonyl)-L-leucyl]amino}-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid, 3C-like proteinase, ...
Authors:Lovell, S, Liu, L, Battaile, K.P, Chamandi, S.D, Kim, Y, Groutas, W.C, Chang, K.O.
Deposit date:2021-12-09
Release date:2021-12-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure-Guided Design of Potent Spirocyclic Inhibitors of Severe Acute Respiratory Syndrome Coronavirus-2 3C-like Protease.
J.Med.Chem., 65, 2022
2MN9
DownloadVisualize
BU of 2mn9 by Molmil
peptoid analogue of maculatin G15 - peptoid trans-Nleu at position 13
Descriptor: maculatin G15
Authors:Uggerhoej, L.E, Guentert, P, Wimmer, R.
Deposit date:2014-03-29
Release date:2014-07-23
Last modified:2014-12-03
Method:SOLUTION NMR
Cite:Structural features of peptoid-peptide hybrids in lipid-water interfaces.
Febs Lett., 588, 2014
5AK8
DownloadVisualize
BU of 5ak8 by Molmil
Structure of C351A mutant of Porphyromonas gingivalis peptidylarginine deiminase
Descriptor: 1,2-ETHANEDIOL, ALANINE, ARGININE, ...
Authors:Kopec, J, Montgomery, A, Shrestha, L, Kiyani, W, Nowak, R, Burgess-Brown, N, Venables, P.J, Yue, W.W.
Deposit date:2015-03-02
Release date:2015-07-22
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Crystal Structure of Porphyromonas Gingivalis Peptidylarginine Deiminase: Implications for Autoimmunity in Rheumatoid Arthritis.
Ann.Rheum.Dis., 75, 2016
3NOI
DownloadVisualize
BU of 3noi by Molmil
Crystal Structure of Natural Killer Cell Cytotoxicity Receptor NKp30 (NCR3)
Descriptor: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, CALCIUM ION, Natural cytotoxicity triggering receptor 3
Authors:Joyce, M.G, Sun, P.D.
Deposit date:2010-06-25
Release date:2011-03-30
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.842 Å)
Cite:Structure of the Natural Killer cell activating receptor NKp30 and dissection of ligand binding site
Proc.Natl.Acad.Sci.USA, 2011
7T48
DownloadVisualize
BU of 7t48 by Molmil
Structure of SARS-CoV-2 3CL protease in complex with inhibitor 9c
Descriptor: (1R,2S)-2-{[N-({[(2r,4R)-7-acetyl-7-azaspiro[3.5]non-5-en-2-yl]oxy}carbonyl)-L-leucyl]amino}-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid, (1S,2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]-2-{[N-({[7-(phenylacetyl)-7-azaspiro[3.5]nonan-2-yl]oxy}carbonyl)-L-leucyl]amino}propane-1-sulfonic acid, 3C-like proteinase, ...
Authors:Lovell, S, Liu, L, Battaile, K.P, Chamandi, S.D, Kim, Y, Groutas, W.C, Chang, K.O.
Deposit date:2021-12-09
Release date:2021-12-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure-Guided Design of Potent Spirocyclic Inhibitors of Severe Acute Respiratory Syndrome Coronavirus-2 3C-like Protease.
J.Med.Chem., 65, 2022
3QV8
DownloadVisualize
BU of 3qv8 by Molmil
Crystal structure of Leishmania mexicana pyruvate kinase(LmPYK)in complex with benzothiazole-2,5-disulfonic acid.
Descriptor: 1,3-benzothiazole-2,5-disulfonic acid, PHOSPHATE ION, Pyruvate kinase
Authors:Morgan, H.P, Auld, D.S, McNae, I.W, Nowicki, M.W, Michels, P.A.M, Fothergill-Gilmore, L.A, Walkinshaw, M.D.
Deposit date:2011-02-25
Release date:2011-06-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:The trypanocidal drug suramin and other trypan blue mimetics are inhibitors of pyruvate kinases and bind to the adenosine site.
J.Biol.Chem., 286, 2011
1APS
DownloadVisualize
BU of 1aps by Molmil
THREE-DIMENSIONAL STRUCTURE OF ACYLPHOSPHATASE. REFINEMENT AND STRUCTURE ANALYSIS
Descriptor: ACYLPHOSPHATASE
Authors:Saudek, V, Pastore, A, Ramponi, G, Williams, R.J.P.
Deposit date:1991-02-20
Release date:1992-07-15
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Three-dimensional structure of acylphosphatase. Refinement and structure analysis.
J.Mol.Biol., 224, 1992
5L2D
DownloadVisualize
BU of 5l2d by Molmil
Streptococcal surface adhesin - CshA NR2
Descriptor: Surface-associated protein CshA
Authors:Back, C.R, Race, P.R, Jenkinson, H.F.
Deposit date:2016-08-01
Release date:2016-12-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:The Streptococcus gordonii Adhesin CshA Protein Binds Host Fibronectin via a Catch-Clamp Mechanism.
J. Biol. Chem., 292, 2017
1P5P
DownloadVisualize
BU of 1p5p by Molmil
Solution Structure of HCV IRES Domain II (minimized average structure)
Descriptor: 77-MER
Authors:Lukavsky, P.J, Kim, I, Otto, G.A, Puglisi, J.D.
Deposit date:2003-04-27
Release date:2003-11-04
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure of HCV IRES domain II determined by NMR.
Nat.Struct.Biol., 10, 2003
7T41
DownloadVisualize
BU of 7t41 by Molmil
Structure of MERS 3CL protease in complex with inhibitor 14c
Descriptor: (1R,2S)-2-{[N-({[1-(tert-butoxycarbonyl)azetidin-3-yl]methoxy}carbonyl)-L-leucyl]amino}-1-hydroxy-3-[(3R)-2-oxo-2,3-dihydro-1H-pyrrol-3-yl]propane-1-sulfonic acid, (1S,2S)-2-{[N-({[1-(tert-butoxycarbonyl)azetidin-3-yl]methoxy}carbonyl)-L-leucyl]amino}-1-hydroxy-3-[(3R)-2-oxo-2,3-dihydro-1H-pyrrol-3-yl]propane-1-sulfonic acid, 3C-like proteinase
Authors:Lovell, S, Kashipathy, M.M, Battaile, K.P, Chamandi, S.D, Kim, Y, Groutas, W.C, Chang, K.O.
Deposit date:2021-12-09
Release date:2021-12-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure-Guided Design of Potent Spirocyclic Inhibitors of Severe Acute Respiratory Syndrome Coronavirus-2 3C-like Protease.
J.Med.Chem., 65, 2022
1BA6
DownloadVisualize
BU of 1ba6 by Molmil
SOLUTION STRUCTURE OF THE METHIONINE-OXIDIZED AMYLOID BETA-PEPTIDE (1-40). DOES OXIDATION AFFECT CONFORMATIONAL SWITCHING? NMR, 10 STRUCTURES
Descriptor: AMYLOID BETA-PEPTIDE
Authors:Watson, A.A, Fairlie, D.P, Craik, D.J.
Deposit date:1998-04-22
Release date:1998-06-17
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Solution structure of methionine-oxidized amyloid beta-peptide (1-40). Does oxidation affect conformational switching?
Biochemistry, 37, 1998
2RQO
DownloadVisualize
BU of 2rqo by Molmil
Solution structure of Polytheonamide B
Descriptor: polytheonamide B
Authors:Hamada, N, Matsunaga, S, Fujiwara, M, Fujjita, K, Hirota, H, Schmucki, R, Guntert, P, Fusetani, N.
Deposit date:2009-09-03
Release date:2010-09-15
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Solution Structure of Polytheonamide B, a Highly Cytotoxic Nonribosomal Polypeptide from Marine Sponge
J.Am.Chem.Soc., 2010
4D9Y
DownloadVisualize
BU of 4d9y by Molmil
The crystal structure of Chelerythrine bound to DNA d(CGTACG)
Descriptor: 1,2-dimethoxy-12-methyl[1,3]benzodioxolo[5,6-c]phenanthridin-12-ium, CALCIUM ION, DNA (5'-D(*CP*GP*TP*AP*CP*G)-3')
Authors:Ferraroni, M, Bazzicalupi, C, Gratteri, P, Bilia, A.R.
Deposit date:2012-01-12
Release date:2013-01-23
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The crystal structure of Chelerythrine bound to DNA d(CGTACG)
To be Published
1WT6
DownloadVisualize
BU of 1wt6 by Molmil
Coiled-Coil domain of DMPK
Descriptor: Myotonin-protein kinase
Authors:Garcia, P, Marino, M, Mayans, O.
Deposit date:2004-11-16
Release date:2005-11-16
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Molecular insights into the self-assembly mechanism of dystrophia myotonica kinase
Faseb J., 20, 2006
1ATZ
DownloadVisualize
BU of 1atz by Molmil
HUMAN VON WILLEBRAND FACTOR A3 DOMAIN
Descriptor: VON WILLEBRAND FACTOR
Authors:Huizinga, E.G, Gros, P.
Deposit date:1997-08-15
Release date:1998-02-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the A3 domain of human von Willebrand factor: implications for collagen binding.
Structure, 5, 1997

224004

PDB entries from 2024-08-21

PDB statisticsPDBj update infoContact PDBjnumon