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PDB: 191 件

2E37
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Structure of TT0471 protein from Thermus thermophilus
分子名称: L-lactate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SULFATE ION
著者Lokanath, N.K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-11-21
公開日2007-11-27
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of TT0471 protein from Thermus thermophilus
To be Published
2EKM
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BU of 2ekm by Molmil
Structure of ST1219 protein from Sulfolobus tokodaii
分子名称: GLYCEROL, Hypothetical protein ST1511
著者Lokanath, N.K, Pampa, K.J, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-03-23
公開日2008-03-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献Structure of ST1219 protein from Sulfolobus tokodaii
To be Published
3VGE
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BU of 3vge by Molmil
Crystal structure of glycosyltrehalose trehalohydrolase (D252S)
分子名称: CITRATE ANION, GLYCEROL, Malto-oligosyltrehalose trehalohydrolase
著者Okazaki, N, Tamada, T, Feese, M.D, Kato, M, Miura, Y, Komeda, T, Kobayashi, K, Kondo, K, Kuroki, R.
登録日2011-08-09
公開日2012-06-20
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Substrate recognition mechanism of a glycosyltrehalose trehalohydrolase from Sulfolobus solfataricus KM1.
Protein Sci., 21, 2012
3VGB
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Crystal structure of glycosyltrehalose trehalohydrolase (GTHase) from Sulfolobus solfataricus KM1
分子名称: CITRATE ANION, GLYCEROL, Malto-oligosyltrehalose trehalohydrolase
著者Okazaki, N, Tamada, T, Feese, M.D, Kato, M, Miura, Y, Komeda, T, Kobayashi, K, Kondo, K, Kuroki, R.
登録日2011-08-09
公開日2012-06-20
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Substrate recognition mechanism of a glycosyltrehalose trehalohydrolase from Sulfolobus solfataricus KM1.
Protein Sci., 21, 2012
3VGU
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E134A mutant nucleoside diphosphate kinase derived from Halomonas sp. 593
分子名称: Nucleoside diphosphate kinase
著者Okazaki, N, Yonezawa, Y, Arai, S, Matsumoto, F, Tamada, T, Tokunaga, H, Ishibashi, M, Tokunaga, M, Kuroki, R.
登録日2011-08-21
公開日2012-07-11
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献A structural mechanism for dimeric to tetrameric oligomer conversion in Halomonas sp. nucleoside diphosphate kinase
Protein Sci., 21, 2012
3VGD
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BU of 3vgd by Molmil
Ctystal structure of glycosyltrehalose trehalohydrolase (D252E)
分子名称: CITRATE ANION, GLYCEROL, Malto-oligosyltrehalose trehalohydrolase
著者Okazaki, N, Tamada, T, Feese, M.D, Kato, M, Miura, Y, Komeda, T, Kobayashi, K, Kondo, K, Kuroki, R.
登録日2011-08-09
公開日2012-06-20
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Substrate recognition mechanism of a glycosyltrehalose trehalohydrolase from Sulfolobus solfataricus KM1.
Protein Sci., 21, 2012
3VGF
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BU of 3vgf by Molmil
Crystal structure of glycosyltrehalose trehalohydrolase (D252S) complexed with maltotriosyltrehalose
分子名称: CITRATE ANION, GLYCEROL, Malto-oligosyltrehalose trehalohydrolase, ...
著者Okazaki, N, Tamada, T, Feese, M.D, Kato, M, Miura, Y, Komeda, T, Kobayashi, K, Kondo, K, Kuroki, R.
登録日2011-08-09
公開日2012-06-20
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Substrate recognition mechanism of a glycosyltrehalose trehalohydrolase from Sulfolobus solfataricus KM1.
Protein Sci., 21, 2012
3VGV
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BU of 3vgv by Molmil
E134A mutant nucleoside diphosphate kinase derived from Halomonas sp. 593
分子名称: Nucleoside diphosphate kinase
著者Okazaki, N, Yonezawa, Y, Arai, S, Matsumoto, F, Tamada, T, Tokunaga, H, Ishibashi, M, Tokunaga, M, Kuroki, R.
登録日2011-08-21
公開日2012-07-11
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A structural mechanism for dimeric to tetrameric oligomer conversion in Halomonas sp. nucleoside diphosphate kinase
Protein Sci., 21, 2012
3VGH
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Crystal structure of glycosyltrehalose trehalohydrolase (E283Q) complexed with maltotriosyltrehalose
分子名称: CITRATE ANION, GLYCEROL, Malto-oligosyltrehalose trehalohydrolase, ...
著者Okazaki, N, Tamada, T, Feese, M.D, Kato, M, Miura, Y, Komeda, T, Kobayashi, K, Kondo, K, Kuroki, R.
登録日2011-08-09
公開日2012-06-20
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Substrate recognition mechanism of a glycosyltrehalose trehalohydrolase from Sulfolobus solfataricus KM1.
Protein Sci., 21, 2012
3VGS
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BU of 3vgs by Molmil
Wild-type nucleoside diphosphate kinase derived from Halomonas sp. 593
分子名称: Nucleoside diphosphate kinase
著者Okazaki, N, Yonezawa, Y, Arai, S, Matsumoto, F, Tamada, T, Tokunaga, H, Ishibashi, M, Tokunaga, M, Kuroki, R.
登録日2011-08-20
公開日2012-07-11
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献A structural mechanism for dimeric to tetrameric oligomer conversion in Halomonas sp. nucleoside diphosphate kinase
Protein Sci., 21, 2012
3VGG
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BU of 3vgg by Molmil
Crystal structure of glycosyltrehalose trehalohydrolase (E283Q) complexed with maltoheptaose
分子名称: CITRATE ANION, GLYCEROL, Malto-oligosyltrehalose trehalohydrolase, ...
著者Okazaki, N, Tamada, T, Feese, M.D, Kato, M, Miura, Y, Komeda, T, Kobayashi, K, Kondo, K, Kuroki, R.
登録日2011-08-09
公開日2012-06-20
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.66 Å)
主引用文献Substrate recognition mechanism of a glycosyltrehalose trehalohydrolase from Sulfolobus solfataricus KM1.
Protein Sci., 21, 2012
3VGT
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BU of 3vgt by Molmil
Wild-type nucleoside diphosphate kinase derived from Halomonas sp. 593
分子名称: Nucleoside diphosphate kinase
著者Okazaki, N, Yonezawa, Y, Arai, S, Matsumoto, F, Tamada, T, Tokunaga, H, Ishibashi, M, Tokunaga, M, Kuroki, R.
登録日2011-08-21
公開日2012-07-11
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献A structural mechanism for dimeric to tetrameric oligomer conversion in Halomonas sp. nucleoside diphosphate kinase
Protein Sci., 21, 2012
7XTL
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BU of 7xtl by Molmil
Crystal structure of the C-terminal domain of human N-acetylglucosaminyltransferase IVa
分子名称: Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A soluble form
著者Miyazaki, T, Oka, N, Mori, S.
登録日2022-05-17
公開日2022-09-28
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.972 Å)
主引用文献Crystal structure and sugar-binding ability of the C-terminal domain of N-acetylglucosaminyltransferase IV establish a new carbohydrate-binding module family.
Glycobiology, 32, 2022
7XTN
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BU of 7xtn by Molmil
Crystal structure of the C-terminal domain of Bombyx mori N-acetylglucosaminyltransferase IV in complex with N-acetylglucosamine
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, N-acetylglucosaminyltransferase IV
著者Miyazaki, T, Oka, N, Mori, S.
登録日2022-05-17
公開日2022-09-28
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Crystal structure and sugar-binding ability of the C-terminal domain of N-acetylglucosaminyltransferase IV establish a new carbohydrate-binding module family.
Glycobiology, 32, 2022
7XTM
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BU of 7xtm by Molmil
Crystal structure of the C-terminal domain of Bombyx mori N-acetylglucosaminyltransferase IV
分子名称: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, N-acetylglucosaminyltransferase IV
著者Miyazaki, T, Oka, N, Mori, S.
登録日2022-05-17
公開日2022-09-28
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Crystal structure and sugar-binding ability of the C-terminal domain of N-acetylglucosaminyltransferase IV establish a new carbohydrate-binding module family.
Glycobiology, 32, 2022
6JV9
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BU of 6jv9 by Molmil
Crystal Structure of Human CRMP2 1-532, unmodified
分子名称: 1,2-ETHANEDIOL, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, Dihydropyrimidinase-related protein 2, ...
著者Jiang, X, Ogawa, T, Hirokawa, N.
登録日2019-04-16
公開日2019-10-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Enhanced carbonyl stress induces irreversible multimerization of CRMP2 in schizophrenia pathogenesis.
Life Sci Alliance, 2, 2019
3J7I
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Structure of alpha- and beta- tubulin in GMPCPP-microtubules
分子名称: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Tubulin alpha-1A chain, ...
著者Yajima, H, Ogura, T, Nitta, R, Okada, Y, Sato, C, Hirokawa, N.
登録日2014-07-01
公開日2014-12-10
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (8.9 Å)
主引用文献Conformational changes in tubulin in GMPCPP and GDP-taxol microtubules observed by cryoelectron microscopy
J.Cell Biol., 198, 2012
3J6H
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Nucleotide-free Kinesin motor domain complexed with GMPCPP-microtubule
分子名称: GUANOSINE-5'-TRIPHOSPHATE, Kinesin heavy chain isoform 5C, MAGNESIUM ION, ...
著者Morikawa, M, Yajima, H, Nitta, R, Inoue, S, Ogura, T, Sato, C, Hirokawa, N.
登録日2014-02-21
公開日2015-04-01
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (8.1 Å)
主引用文献X-ray and Cryo-EM structures reveal mutual conformational changes of Kinesin and GTP-state microtubules upon binding
Embo J., 2015
1IA0
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BU of 1ia0 by Molmil
KIF1A HEAD-MICROTUBULE COMPLEX STRUCTURE IN ATP-FORM
分子名称: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, KINESIN-LIKE PROTEIN KIF1A, ...
著者Kikkawa, M, Sablin, E.P, Okada, Y, Yajima, H, Fletterick, R.J, Hirokawa, N.
登録日2001-03-22
公開日2002-03-22
最終更新日2021-10-27
実験手法ELECTRON MICROSCOPY (15 Å)
主引用文献Switch-based Mechanism of Kinesin Motors
Nature, 411, 2001
5GSY
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BU of 5gsy by Molmil
Kinesin-8 motor, KIF19A, in the nucleotide-free state complexed with GDP-taxol microtubule
分子名称: Kinesin-like protein KIF19
著者Morikawa, M, Nitta, R, Yajima, H, Shigematsu, H, Kikkawa, M, Hirokawa, N.
登録日2016-08-17
公開日2016-09-28
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (7 Å)
主引用文献Motility and microtubule depolymerization mechanisms of the Kinesin-8 motor, KIF19A
Elife, 5, 2016
1I6I
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CRYSTAL STRUCTURE OF THE KIF1A MOTOR DOMAIN COMPLEXED WITH MG-AMPPCP
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, KINESIN-LIKE PROTEIN KIF1A, MAGNESIUM ION, ...
著者Kikkawa, M, Sablin, E.P, Okada, Y, Yajima, H, Fletterick, R.J, Hirokawa, N.
登録日2001-03-02
公開日2001-05-30
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Switch-based mechanism of kinesin motors
Nature, 411, 2001
5GSZ
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BU of 5gsz by Molmil
Crystal Structure of the KIF19A Motor Domain Complexed with Mg-ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, Kinesin-like protein KIF19, MAGNESIUM ION
著者Wang, D, Nitta, R, Hirokawa, N.
登録日2016-08-18
公開日2016-09-28
最終更新日2020-02-26
実験手法X-RAY DIFFRACTION (2.72 Å)
主引用文献Motility and microtubule depolymerization mechanisms of the Kinesin-8 motor, KIF19A
Elife, 5, 2016
1I5S
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CRYSTAL STRUCTURE OF THE KIF1A MOTOR DOMAIN COMPLEXED WITH MG-ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, KINESIN-LIKE PROTEIN KIF1A, MAGNESIUM ION
著者Kikkawa, M, Sablin, E.P, Okada, Y, Yajima, H, Fletterick, R.J, Hirokawa, N.
登録日2001-02-28
公開日2001-05-30
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Switch-based mechanism of kinesin motors
Nature, 411, 2001
1UC4
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Structure of diol dehydratase complexed with (S)-1,2-propanediol
分子名称: AMMONIUM ION, CYANOCOBALAMIN, POTASSIUM ION, ...
著者Shibata, N, Nakanishi, Y, Fukuoka, M, Yamanishi, M, Yasuoka, N, Toraya, T.
登録日2003-04-08
公開日2003-07-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural rationalization for the lack of stereospecificity in coenzyme B12-dependent diol dehydratase
J.BIOL.CHEM., 278, 2003
1V8J
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The Crystal Structure of the Minimal Functional Domain of the Microtubule Destabilizer KIF2C Complexed with Mg-ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, Kinesin-like protein KIF2C, MAGNESIUM ION
著者Ogawa, T, Nitta, R, Okada, Y, Hirokawa, N.
登録日2004-01-09
公開日2004-03-02
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3.24 Å)
主引用文献A common mechanism for microtubule destabilizers-M type kinesins stabilize curling of the protofilament using the class-specific neck and loops.
Cell(Cambridge,Mass.), 116, 2004

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件を2024-07-10に公開中

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