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PDB: 48 results

2DA5
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Solution structure of the second homeobox domain of Zinc fingers and homeoboxes protein 3 (Triple homeobox 1 protein)
Descriptor: Zinc fingers and homeoboxes protein 3
Authors:Ohnishi, S, Kigawa, T, Saito, K, Koshiba, S, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-12-13
Release date:2006-06-13
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the second homeobox domain of Zinc fingers and homeoboxes protein 3 (Triple homeobox 1 protein)
To be Published
2DMP
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Solution structure of the third homeobox domain of Zinc fingers and homeoboxes protein 2
Descriptor: Zinc fingers and homeoboxes protein 2
Authors:Ohnishi, S, Sasagawa, A, Saito, K, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-04-24
Release date:2006-10-24
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the third homeobox domain of Zinc fingers and homeoboxes protein 2
To be Published
2DMT
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Solution structure of the homeobox domain of Homeobox protein BarH-like 1
Descriptor: Homeobox protein BarH-like 1
Authors:Ohnishi, S, Yoneyama, M, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-04-24
Release date:2006-10-24
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the homeobox domain of Homeobox protein BarH-like 1
To be Published
2DMQ
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Solution structure of the homeobox domain of LIM/homeobox protein Lhx9
Descriptor: LIM/homeobox protein Lhx9
Authors:Ohnishi, S, Tochio, N, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-04-24
Release date:2006-10-24
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the homeobox domain of LIM/homeobox protein Lhx9
To be Published
2DMW
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BU of 2dmw by Molmil
Solution structure of the LONGIN domain of Synaptobrevin-like protein 1
Descriptor: synaptobrevin-like 1 variant
Authors:Ohnishi, S, Sato, M, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-04-24
Release date:2006-10-24
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the LONGIN domain of Synaptobrevin-like protein 1
To be Published
2DMX
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Solution structure of the J domain of DnaJ homolog subfamily B member 8
Descriptor: DnaJ homolog subfamily B member 8
Authors:Ohnishi, S, Tochio, N, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-04-24
Release date:2006-10-24
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the J domain of DnaJ homolog subfamily B member 8
To be Published
2ECB
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BU of 2ecb by Molmil
The solution structure of the third homeobox domain of human zinc fingers and homeoboxes protein
Descriptor: Zinc fingers and homeoboxes protein 1
Authors:Ohnishi, S, Tochio, N, Sasagawa, A, Saito, K, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-13
Release date:2007-02-27
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:The solution structure of the third homeobox domain of human Zinc fingers and homeoboxes protein
To be Published
2DA6
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Solution structure of the homeobox domain of Hepatocyte nuclear factor 1-beta (HNF-1beta)
Descriptor: Hepatocyte nuclear factor 1-beta
Authors:Ohnishi, S, Kigawa, T, Sato, M, Koshiba, S, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-12-13
Release date:2006-12-26
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the homeobox domain of Hepatocyte nuclear factor 1-beta (HNF-1beta)
To be Published
2DA7
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Solution structure of the homeobox domain of Zinc finger homeobox protein 1b (Smad interacting protein 1)
Descriptor: Zinc finger homeobox protein 1b
Authors:Ohnishi, S, Kigawa, T, Sato, M, Koshiba, S, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-12-13
Release date:2006-12-26
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the homeobox domain of Zinc finger homeobox protein 1b (Smad interacting protein 1)
To be Published
2DA1
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Solution structure of the first homeobox domain of AT-binding transcription factor 1 (ATBF1)
Descriptor: Alpha-fetoprotein enhancer binding protein
Authors:Ohnishi, S, Kigawa, T, Tomizawa, T, Koshiba, S, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-12-13
Release date:2006-06-13
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the first homeobox domain of AT-binding transcription factor 1 (ATBF1)
To be Published
2DAD
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Solution structure of the fifth crystall domain of the non-lens protein, Absent in melanoma 1
Descriptor: Absent in melanoma 1 protein
Authors:Ohnishi, S, Kigawa, T, Saito, K, Koshiba, S, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-12-13
Release date:2006-06-13
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the fifth crystall domain of the non-lens protein, Absent in melanoma 1
To be Published
2CUF
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BU of 2cuf by Molmil
Solution structure of the homeobox domain of the human hypothetical protein FLJ21616
Descriptor: FLJ21616 protein
Authors:Ohnishi, S, Kigawa, T, Tomizawa, T, Koshiba, S, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-26
Release date:2005-11-26
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the homeobox domain of the human hypothetical protein FLJ21616
To be Published
2CUB
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Solution structure of the SH3 domain of the human cytoplasmic protein Nck1
Descriptor: Cytoplasmic protein NCK1
Authors:Ohnishi, S, Kigawa, T, Sato, M, Tomizawa, T, Koshiba, S, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-26
Release date:2005-11-26
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the SH3 domain of the human cytoplasmic protein Nck1
To be Published
2DMS
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Solution structure of the homeobox domain of Homeobox protein OTX2
Descriptor: Homeobox protein OTX2
Authors:Ohnishi, S, Saito, K, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-04-24
Release date:2006-10-24
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the homeobox domain of Homeobox protein OTX2
To be Published
2ECC
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Solution Structure of the second Homeobox Domain of Human Homeodomain Leucine Zipper-Encoding Gene (Homez)
Descriptor: Homeobox and leucine zipper protein Homez
Authors:Ohnishi, S, Kamatari, Y.O, Tochio, N, Nameki, N, Miyamoto, K, Li, H, Kobayashi, N, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-13
Release date:2007-02-27
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution Structure of the second Homeobox Domain of Human Homeodomain Leucine Zipper-Encoding Gene (Homez)
To be Published
2E19
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Solution structure of the homeobox domain from human NIL-2-A zinc finger protein, transcription factor 8
Descriptor: Transcription factor 8
Authors:Ohnishi, S, Tochio, N, Koshiba, S, Harada, T, Watanabe, S, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-10-19
Release date:2007-04-24
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the homeobox domain from human NIL-2-A zinc finger protein, transcription factor 8
To be Published
2E29
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BU of 2e29 by Molmil
Solution structure of the GUCT domain from human ATP-dependent RNA helicase DDX50, DEAD box protein 50
Descriptor: ATP-dependent RNA helicase DDX50
Authors:Ohnishi, S, Paakkonen, K, Guntert, P, Sato, M, Koshiba, S, Harada, T, Watanabe, S, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-11-10
Release date:2007-05-15
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the GUCT domain from human RNA helicase II/Gubeta reveals the RRM fold, but implausible RNA interactions
Proteins, 74, 2008
2DWV
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BU of 2dwv by Molmil
Solution structure of the second WW domain from mouse salvador homolog 1 protein (mWW45)
Descriptor: Salvador homolog 1 protein
Authors:Ohnishi, S, Kigawa, T, Koshiba, S, Tomizawa, T, Sato, M, Tochio, N, Inoue, M, Harada, T, Watanabe, S, Guntert, P, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-08-17
Release date:2007-02-17
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of an atypical WW domain in a novel beta-clam-like dimeric form
Febs Lett., 581, 2007
5YGX
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Structure of BACE1 in complex with N-(3-((4R,5R,6S)-2-amino-6-(1,1-difluoroethyl)-5-fluoro-4-methyl-5,6-dihydro-4H-1,3-oxazin-4-yl)-4-fluorophenyl)-5-(fluoromethoxy)pyrazine-2-carboxamide
Descriptor: Beta-secretase 1, DIMETHYL SULFOXIDE, GLYCEROL, ...
Authors:Nakahara, K, Fuchino, K, Komano, K, Asada, N, Tadano, G, Hasegawa, T, Yamamoto, T, Sako, Y, Ogawa, M, Unemura, C, Hosono, M, Sakaguchi, G, Ando, S, Ohnishi, S, Kido, Y, Fukushima, T, Dhuyvetter, D, Borghys, H, Gijsen, H, Yamano, Y, Iso, Y, Kusakabe, K.
Deposit date:2017-09-27
Release date:2018-08-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Discovery of Potent and Centrally Active 6-Substituted 5-Fluoro-1,3-dihydro-oxazine beta-Secretase (BACE1) Inhibitors via Active Conformation Stabilization
J. Med. Chem., 61, 2018
5YGY
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Crystal Structure of BACE1 in complex with (S)-N-(3-(2-amino-6-(fluoromethyl)-4 -methyl-4H-1,3-oxazin-4-yl)-4-fluorophenyl)-5-cyanopicolinamide
Descriptor: Beta-secretase 1, GLYCEROL, IODIDE ION, ...
Authors:Fuchino, K, Mitsuoka, Y, Masui, M, Kurose, N, Yoshida, S, Komano, K, Yamamoto, T, Ogawa, M, Unemura, C, Hosono, M, Ito, H, Sakaguchi, G, Ando, S, Ohnishi, S, Kido, Y, Fukushima, T, Miyajima, H, Hiroyama, S, Koyabu, K, Dhuyvetter, D, Borghys, H, Gijsen, H, Yamano, Y, Iso, Y, Kusakabe, K.
Deposit date:2017-09-27
Release date:2018-05-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Rational Design of Novel 1,3-Oxazine Based beta-Secretase (BACE1) Inhibitors: Incorporation of a Double Bond To Reduce P-gp Efflux Leading to Robust A beta Reduction in the Brain
J. Med. Chem., 61, 2018
2DJN
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BU of 2djn by Molmil
The solution structure of the homeobox domain of human Homeobox protein DLX-5
Descriptor: Homeobox protein DLX-5
Authors:Sasagawa, A, Ohnishi, S, Tochio, N, Saito, K, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-04-05
Release date:2006-10-05
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:The solution structure of the homeobox domain of human Homeobox protein DLX-5
To be Published
2DMN
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The solution structure of the homeobox domain of human homeobox protein TGIF2LX
Descriptor: Homeobox protein TGIF2LX
Authors:Tochio, N, Ohnishi, S, Sasagawa, A, Saito, K, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-04-22
Release date:2006-10-22
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:The solution structure of the homeobox domain of human homeobox protein TGIF2LX
To be Published
2E1O
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Solution structure of RSGI RUH-028, a homeobox domain from human cDNA
Descriptor: Homeobox protein PRH
Authors:Nakamura, A, Ohnishi, S, Abe, T, Nameki, N, Tochio, N, Koshiba, S, Kigawa, T, Yokoyama, S, Kawaii, S, Hirota, H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-10-27
Release date:2006-11-14
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of RSGI RUH-028, a homeobox domain from human cDNA
To be Published
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