4F13
| Alginate lyase A1-III Y246F complexed with tetrasaccharide | Descriptor: | 4-deoxy-alpha-L-erythro-hex-4-enopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid, Alginate lyase, beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid | Authors: | Mikami, B, Ban, M, Suzuki, S, Yoon, H.-J, Miyake, O, Yamasaki, M, Ogura, K, Maruyama, Y, Hashimoto, W, Murata, K. | Deposit date: | 2012-05-06 | Release date: | 2012-06-27 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2.208 Å) | Cite: | Induced-fit motion of a lid loop involved in catalysis in alginate lyase A1-III Acta Crystallogr.,Sect.D, 68, 2012
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4F10
| Alginate lyase A1-III H192A complexed with tetrasaccharide | Descriptor: | 4-deoxy-alpha-L-erythro-hex-4-enopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid, Alginate lyase, alpha-L-gulopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid | Authors: | Mikami, B, Ban, M, Suzuki, S, Yoon, H.-J, Miyake, O, Yamasaki, M, Ogura, K, Maruyama, Y, Hashimoto, W, Murata, K. | Deposit date: | 2012-05-05 | Release date: | 2012-06-27 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Induced-fit motion of a lid loop involved in catalysis in alginate lyase A1-III Acta Crystallogr.,Sect.D, 68, 2012
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4E1Y
| Alginate lyase A1-III H192A apo form | Descriptor: | Alginate lyase | Authors: | Mikami, B, Ban, M, Suzuki, S, Yoon, H.-J, Miyake, O, Yamasaki, M, Ogura, K, Maruyama, Y, Hashimoto, W, Murata, K. | Deposit date: | 2012-03-07 | Release date: | 2012-04-11 | Last modified: | 2024-10-16 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Induced-fit motion of a lid loop involved in catalysis in alginate lyase A1-III Acta Crystallogr.,Sect.D, 68, 2012
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1IO6
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1AK7
| DESTRIN, NMR, 20 STRUCTURES | Descriptor: | DESTRIN | Authors: | Hatanaka, H, Moriyama, K, Ogura, K, Ichikawa, S, Yahara, I, Inagaki, F. | Deposit date: | 1997-05-29 | Release date: | 1997-10-15 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | Tertiary structure of destrin and structural similarity between two actin-regulating protein families. Cell(Cambridge,Mass.), 85, 1996
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1AK6
| DESTRIN, NMR, MINIMIZED AVERAGE STRUCTURE | Descriptor: | DESTRIN | Authors: | Hatanaka, H, Moriyama, K, Ogura, K, Ichikawa, S, Yahara, I, Inagaki, F. | Deposit date: | 1997-05-29 | Release date: | 1997-11-12 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | Tertiary structure of destrin and structural similarity between two actin-regulating protein families. Cell(Cambridge,Mass.), 85, 1996
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1AHM
| DER F 2, THE MAJOR MITE ALLERGEN FROM DERMATOPHAGOIDES FARINAE, NMR, 10 STRUCTURES | Descriptor: | DER F 2 | Authors: | Ichikawa, S, Hatanaka, H, Yuuki, T, Iwamoto, N, Ogura, K, Okumura, Y, Inagaki, F. | Deposit date: | 1997-04-07 | Release date: | 1998-04-08 | Last modified: | 2022-02-16 | Method: | SOLUTION NMR | Cite: | Solution structure of Der f 2, the major mite allergen for atopic diseases. J.Biol.Chem., 273, 1998
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1AHK
| DER F 2, THE MAJOR MITE ALLERGEN FROM DERMATOPHAGOIDES FARINAE, NMR, MINIMIZED AVERAGE STRUCTURE | Descriptor: | DER F 2 | Authors: | Ichikawa, S, Hatanaka, H, Yuuki, T, Iwamoto, N, Ogura, K, Okumura, Y, Inagaki, F. | Deposit date: | 1997-04-07 | Release date: | 1998-04-08 | Last modified: | 2022-02-16 | Method: | SOLUTION NMR | Cite: | Solution structure of Der f 2, the major mite allergen for atopic diseases. J.Biol.Chem., 273, 1998
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1WRF
| Refined solution structure of Der f 2, The Major Mite Allergen from Dermatophagoides farinae | Descriptor: | Mite group 2 allergen Der f 2 | Authors: | Ichikawa, S, Takai, T, Inoue, T, Yuuki, T, Okumura, Y, Ogura, K, Inagaki, F, Hatanaka, H. | Deposit date: | 2004-10-15 | Release date: | 2005-04-19 | Last modified: | 2022-03-02 | Method: | SOLUTION NMR | Cite: | NMR Study on the Major Mite Allergen Der f 2: Its Refined Tertiary Structure, Epitopes for Monoclonal Antibodies and Characteristics Shared by ML Protein Group Members J.Biochem.(Tokyo), 137, 2005
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1GCQ
| CRYSTAL STRUCTURE OF VAV AND GRB2 SH3 DOMAINS | Descriptor: | (4R)-2-METHYLPENTANE-2,4-DIOL, GROWTH FACTOR RECEPTOR-BOUND PROTEIN 2, VAV PROTO-ONCOGENE | Authors: | Nishida, M, Nagata, K, Hachimori, Y, Ogura, K, Inagaki, F. | Deposit date: | 2000-08-08 | Release date: | 2001-08-08 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (1.68 Å) | Cite: | Novel recognition mode between Vav and Grb2 SH3 domains. EMBO J., 20, 2001
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1GCP
| CRYSTAL STRUCTURE OF VAV SH3 DOMAIN | Descriptor: | VAV PROTO-ONCOGENE | Authors: | Nishida, M, Nagata, K, Hachimori, Y, Ogura, K, Inagaki, F. | Deposit date: | 2000-08-08 | Release date: | 2001-08-08 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Novel recognition mode between Vav and Grb2 SH3 domains. EMBO J., 20, 2001
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2CWS
| Crystal structure at 1.0 A of alginate lyase A1-II', a member of polysaccharide lyase family-7 | Descriptor: | GLYCEROL, SULFATE ION, alginate lyase A1-II' | Authors: | Yamasaki, M, Ogura, K, Hashimoto, W, Mikami, B, Murata, K. | Deposit date: | 2005-06-25 | Release date: | 2005-11-15 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (1 Å) | Cite: | A Structural Basis for Depolymerization of Alginate by Polysaccharide Lyase Family-7 J.Mol.Biol., 352, 2005
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1Q1O
| Solution Structure of the PB1 Domain of Cdc24p (Long Form) | Descriptor: | Cell division control protein 24 | Authors: | Yoshinaga, S, Kohjima, M, Ogura, K, Yokochi, M, Takeya, R, Ito, T, Sumimoto, H, Inagaki, F. | Deposit date: | 2003-07-22 | Release date: | 2003-10-14 | Last modified: | 2024-05-29 | Method: | SOLUTION NMR | Cite: | The PB1 domain and the PC motif-containing region are structurally similar protein binding modules EMBO J., 22, 2003
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2CZO
| Solution Structure of the PX Domain of Bem1p | Descriptor: | Bud emergence protein 1 | Authors: | Maeda, A, Ogura, K, Horiuchi, M, Kumeta, H, Fujioka, Y, Inagaki, F. | Deposit date: | 2005-07-14 | Release date: | 2006-10-03 | Last modified: | 2024-05-29 | Method: | SOLUTION NMR | Cite: | Solution structure of the PX domain of Bem1p To be Published
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1TH5
| Solution structure of C-terminal domain of NifU-like protein from Oryza sativa | Descriptor: | NifU1 | Authors: | Kumeta, H, Ogura, K, Asayama, M, Katoh, S, Katoh, E, Inagaki, F. | Deposit date: | 2004-06-01 | Release date: | 2005-09-27 | Last modified: | 2024-05-29 | Method: | SOLUTION NMR | Cite: | The NMR structure of the domain II of a chloroplastic NifU-like protein OsNifU1A. J.Biomol.Nmr, 38, 2007
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5XND
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1UEC
| Crystal structure of autoinhibited form of tandem SH3 domain of p47phox | Descriptor: | Neutrophil cytosol factor 1 | Authors: | Yuzawa, S, Suzuki, N.N, Fujioka, Y, Ogura, K, Sumimoto, H, Inagaki, F. | Deposit date: | 2003-05-11 | Release date: | 2003-05-27 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (1.82 Å) | Cite: | A molecular mechanism for autoinhibition of the tandem SH3 domains of p47phox, the regulatory subunit of the phagocyte NADPH oxidase Genes Cells, 9, 2004
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1TZ1
| Solution structure of the PB1 domain of CDC24P (short form) | Descriptor: | Cell division control protein 24 | Authors: | Yoshinaga, S, Terasawa, H, Ogura, K, Noda, Y, Ito, T, Sumimoto, H, Inagaki, F. | Deposit date: | 2004-07-09 | Release date: | 2005-09-06 | Last modified: | 2024-05-29 | Method: | SOLUTION NMR | Cite: | Solution structure of the PB1 domain of CDC24P (short form) To be Published
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1VD2
| Solution Structure of the PB1 domain of PKCiota | Descriptor: | Protein kinase C, iota type | Authors: | Hirano, Y, Yoshinaga, S, Yokochi, M, Ogura, K, Noda, Y, Sumimoto, H, Inagaki, F. | Deposit date: | 2004-03-18 | Release date: | 2004-09-14 | Last modified: | 2023-12-27 | Method: | SOLUTION NMR | Cite: | Solution structure of atypical protein kinase C PB1 domain and its mode of interaction with ZIP/p62 and MEK5 J.Biol.Chem., 279, 2004
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2LI5
| NMR structure of Atg8-Atg7C30 complex | Descriptor: | Autophagy-related protein 8, Ubiquitin-like modifier-activating enzyme ATG7 | Authors: | Kumeta, H, Satoo, K, Noda, N.N, Fujioka, Y, Ogura, K, Nakatogawa, H, Ohsumi, Y, Inagaki, F. | Deposit date: | 2011-08-23 | Release date: | 2011-11-16 | Last modified: | 2024-05-15 | Method: | SOLUTION NMR | Cite: | Structural basis of Atg8 activation by a homodimeric E1, Atg7. Mol.Cell, 44, 2011
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2JPE
| FHA domain of NIPP1 | Descriptor: | Nuclear inhibitor of protein phosphatase 1 | Authors: | Kumeta, H, Ogura, K, Fujioka, Y, Tanuma, N, Kikuchi, K, Inagaki, F. | Deposit date: | 2007-05-07 | Release date: | 2007-05-15 | Last modified: | 2024-05-08 | Method: | SOLUTION NMR | Cite: | The NMR structure of the NIPP1 FHA domain. J.Biomol.Nmr, 40, 2008
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2JNV
| Solution structure of C-terminal domain of NifU-like protein from Oryza sativa | Descriptor: | NifU-like protein 1, chloroplast | Authors: | Saio, T, Ogura, K, Kumeta, H, Yokochi, M, Katoh, S, Katoh, E, Inagaki, F, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2007-02-06 | Release date: | 2007-12-18 | Last modified: | 2023-12-20 | Method: | SOLUTION NMR | Cite: | The cooperative role of OsCnfU-1A domain I and domain II in the iron sulphur cluster transfer process as revealed by NMR J.Biochem.(Tokyo), 142, 2007
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2KFK
| Solution structure of Bem1p PB1 domain complexed with Cdc24p PB1 domain | Descriptor: | Bud emergence protein 1, Cell division control protein 24 | Authors: | Kobashigawa, Y, Yoshinaga, S, Tandai, T, Ogura, K, Inagaki, F. | Deposit date: | 2009-02-23 | Release date: | 2009-10-06 | Last modified: | 2024-05-29 | Method: | SOLUTION NMR | Cite: | NMR structure of the heterodimer of Bem1 and Cdc24 PB1 domains from Saccharomyces cerevisiae J.Biochem., 146, 2009
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2KWC
| The NMR structure of the autophagy-related protein Atg8 | Descriptor: | Autophagy-related protein 8 | Authors: | Kumeta, H, Watanabe, M, Nakatogawa, H, Yamaguchi, M, Ogura, K, Adachi, W, Fujioka, Y, Noda, N.N, Ohsumi, Y, Inagaki, F. | Deposit date: | 2010-04-05 | Release date: | 2010-05-12 | Last modified: | 2024-05-15 | Method: | SOLUTION NMR | Cite: | The NMR structure of the autophagy-related protein Atg8 J.Biomol.Nmr, 47, 2010
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2KSV
| The NMR structure of protein-glutaminase from Chryseobacterium proteolyticum | Descriptor: | Protein-glutaminase | Authors: | Kumeta, H, Miwa, N, Ogura, K, Kai, Y, Mizukoshi, T, Shimba, N, Suzuki, E, Inagaki, F. | Deposit date: | 2010-01-14 | Release date: | 2010-02-16 | Last modified: | 2022-03-16 | Method: | SOLUTION NMR | Cite: | The NMR structure of protein-glutaminase from Chryseobacterium proteolyticum. J.Biomol.Nmr, 46, 2010
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