Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 7397 results

1BSG
DownloadVisualize
BU of 1bsg by Molmil
BETA-LACTAMASE FROM STREPTOMYCES ALBUS G
Descriptor: ACETATE ION, BETA LACTAMASE
Authors:Fonze, E, Charlier, P, Dideberg, O.
Deposit date:1998-07-20
Release date:1999-01-13
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:

3X2V
DownloadVisualize
BU of 3x2v by Molmil
Michaelis-like complex of cAMP-dependent Protein Kinase Catalytic Subunit
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CARBONATE ION, MAGNESIUM ION, ...
Authors:Das, A, Langan, P, Gerlits, O, Kovalevsky, A.Y, Heller, W.T.
Deposit date:2015-01-02
Release date:2015-12-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Protein Kinase A Catalytic Subunit Primed for Action: Time-Lapse Crystallography of Michaelis Complex Formation.
Structure, 23, 2015
3ZGF
DownloadVisualize
BU of 3zgf by Molmil
Crystal structure of the Fucosylgalactoside alpha N- acetylgalactosaminyltransferase (GTA, cisAB mutant L266G, G268A) in complex with in complex with NPE caged UDP-Gal (P2(1)2(1)2(1) space group)
Descriptor: 1-(2-NITROPHENYL)ETHYL UDP-GALACTOSE, HISTO-BLOOD GROUP ABO SYSTEM TRANSFERASE, MANGANESE (II) ION, ...
Authors:Jorgensen, R, Batot, G.O, Hindsgaul, O, Tanaka, H, Perez, S, Imberty, A, Breton, C, Royant, A, Palcic, M.M.
Deposit date:2012-12-17
Release date:2013-01-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.701 Å)
Cite:Structures of a Human Blood Group Glycosyltransferase in Complex with a Photo-Activatable Udp-Gal Derivative Reveal Two Different Binding Conformations
Acta Crystallogr.,Sect.F, 70, 2014
3X3C
DownloadVisualize
BU of 3x3c by Molmil
Crystal structure of the light-driven sodium pump KR2 in neutral state
Descriptor: OLEIC ACID, RETINAL, Sodium pumping rhodopsin
Authors:Kato, H.E, Inoue, K, Abe-Yoshizumi, R, Kato, Y, Ono, H, Konno, M, Ishizuka, T, Hoque, M.R, Hososhima, S, Kunitomo, H, Ito, J, Yoshizawa, S, Yamashita, K, Takemoto, M, Nishizawa, T, Taniguchi, R, Kogure, K, Maturana, A.D, Iino, Y, Yawo, H, Ishitani, R, Kandori, H, Nureki, O.
Deposit date:2015-01-18
Release date:2015-04-08
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for Na(+) transport mechanism by a light-driven Na(+) pump
Nature, 521, 2015
3ZK2
DownloadVisualize
BU of 3zk2 by Molmil
Crystal structure of the sodium binding rotor ring at pH 8.7
Descriptor: ATP SYNTHASE SUBUNIT C, DECYL-BETA-D-MALTOPYRANOSIDE, SODIUM ION
Authors:Schulz, S, Meier, T, Yildiz, O.
Deposit date:2013-01-21
Release date:2013-05-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.63 Å)
Cite:A new type of Na(+)-driven ATP synthase membrane rotor with a two-carboxylate ion-coupling motif.
PLoS Biol., 11, 2013
3X2U
DownloadVisualize
BU of 3x2u by Molmil
Michaelis-like initial complex of cAMP-dependent Protein Kinase Catalytic Subunit.
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Substrate Peptide, ...
Authors:Das, A, Langan, P, Gerlits, O, Kovalevsky, A.Y, Heller, W.T.
Deposit date:2015-01-02
Release date:2015-12-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Protein Kinase A Catalytic Subunit Primed for Action: Time-Lapse Crystallography of Michaelis Complex Formation.
Structure, 23, 2015
3ZSX
DownloadVisualize
BU of 3zsx by Molmil
Small molecule inhibitors of the LEDGF site of HIV type 1 integrase identified by fragment screening and structure based drug design
Descriptor: 1,2-ETHANEDIOL, 5-({[2-(benzylcarbamoyl)benzyl](prop-2-en-1-yl)amino}methyl)-1,3-benzodioxole-4-carboxylate, ACETATE ION, ...
Authors:Peat, T.S, Newman, J, Rhodes, D.I, Vandergraaff, N, Le, G, Jones, E.D, Smith, J.A, Coates, J.A.V, Thienthong, N, Dolezal, O, Ryan, J.H, Savage, G.P, Francis, C.L, Deadman, J.J.
Deposit date:2011-07-01
Release date:2012-07-11
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Small Molecule Inhibitors of the Ledgf Site of Human Immunodeficiency Virus Integrase Identified by Fragment Screening and Structure Based Design.
Plos One, 7, 2012
3ZMR
DownloadVisualize
BU of 3zmr by Molmil
Bacteroides ovatus GH5 xyloglucanase in complex with a XXXG heptasaccharide
Descriptor: 1,2-ETHANEDIOL, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CELLULASE (GLYCOSYL HYDROLASE FAMILY 5), ...
Authors:Larsbrink, J, Rogers, T.E, Hemsworth, G.R, McKee, L.S, Spadiut, O, Klinter, S, Pudlo, N.A, Urs, K, Kelly, A.G, Cederholm, S.N, Davies, G.J, Martens, E.C, Brumer, H.
Deposit date:2013-02-12
Release date:2014-01-15
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:A Discrete Genetic Locus Confers Xyloglucan Metabolism in Select Human Gut Bacteroidetes
Nature, 506, 2014
3ZHE
DownloadVisualize
BU of 3zhe by Molmil
Structure of the C. elegans SMG5-SMG7 complex
Descriptor: NONSENSE-MEDIATED MRNA DECAY PROTEIN, PROTEIN SMG-7
Authors:Jonas, S, Weichenrieder, O, Izaurralde, E.
Deposit date:2012-12-21
Release date:2013-02-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:An Unusual Arrangement of Two 14-3-3-Like Domains in the Smg5-Smg7 Heterodimer is Required for Efficient Nonsense-Mediated Mrna Decay.
Genes Dev., 27, 2013
3ZOB
DownloadVisualize
BU of 3zob by Molmil
Solution structure of chicken Engrailed 2 homeodomain
Descriptor: HOMEOBOX PROTEIN ENGRAILED-2
Authors:Carlier, L, Balayssac, S, Cantrelle, F.X, Khemtemourian, L, Chassaing, G, Joliot, A, Lequin, O.
Deposit date:2013-02-21
Release date:2013-08-28
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Investigation of Homeodomain Membrane Translocation Properties: Insights from the Structure Determination of Engrailed-2 Homeodomain in Aqueous and Membrane-Mimetic Environments.
Biophys.J., 105, 2013
3ZUH
DownloadVisualize
BU of 3zuh by Molmil
Negative stain EM Map of the AAA protein CbbX, a red-type Rubisco activase from R. sphaeroides
Descriptor: ADENOSINE-5'-DIPHOSPHATE, PROTEIN CBBX, RIBULOSE-1,5-DIPHOSPHATE
Authors:Mueller-Cajar, O, Stotz, M, Wendler, P, Hartl, F.U, Bracher, A, Hayer-Hartl, M.
Deposit date:2011-07-19
Release date:2011-11-09
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (21 Å)
Cite:Structure and Function of the Aaa+ Protein Cbbx, a Red-Type Rubisco Activase.
Nature, 479, 2011
3ZR0
DownloadVisualize
BU of 3zr0 by Molmil
Crystal structure of human MTH1 in complex with 8-oxo-dGMP
Descriptor: 7,8-DIHYDRO-8-OXOGUANINE TRIPHOSPHATASE, 8-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE, SULFATE ION
Authors:Svensson, L.M, Jemth, A, Desroses, M, Loseva, O, Helleday, T, Hogbom, M, Stenmark, P.
Deposit date:2011-06-13
Release date:2011-07-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of Human Mth1 and the 8-Oxo-Dgmp Product Complex.
FEBS Lett., 585, 2011
4AHT
DownloadVisualize
BU of 4aht by Molmil
Parallel screening of a low molecular weight compound library: do differences in methodology affect hit identification
Descriptor: 1,2-ETHANEDIOL, 1,3-benzodioxole-4-carboxylic acid, ACETIC ACID, ...
Authors:Wielens, J, Heady, S.J, Rhodes, D.I, Mulder, R.J, Dolezal, O, Deadman, J.J, Newman, J, Chalmers, D.K, Parker, M.W, Peat, T.S, Scanlon, M.J.
Deposit date:2012-02-07
Release date:2012-12-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Parallel Screening of Low Molecular Weight Fragment Libraries: Do Differences in Methodology Affect Hit Identification?
J.Biomol.Screen, 18, 2013
4AF2
DownloadVisualize
BU of 4af2 by Molmil
C61S mutant of thiol peroxidase form E. coli.
Descriptor: THIOL PEROXIDASE
Authors:Beckham, K.S.H, Roe, A.J, Byron, O, Gabrielsen, M.
Deposit date:2012-01-16
Release date:2012-05-02
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:The Structure of an Orthorhombic Crystal Form of a `Forced Reduced' Thiol Peroxidase Reveals Lattice Formation Aided by the Presence of the Affinity Tag
Acta Crystallogr.,Sect.F, 68, 2012
4B4C
DownloadVisualize
BU of 4b4c by Molmil
Crystal structure of the DNA-binding domain of human CHD1.
Descriptor: 1,2-ETHANEDIOL, CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 1, GLYCEROL, ...
Authors:Allerston, C.K, Cooper, C.D.O, Shrestha, L, Vollmar, M, Burgess-Brown, N, Yue, W.W, Carpenter, E.P, Arrowsmith, C.H, Edwards, A, Bountra, C, von Delft, F, Gileadi, O.
Deposit date:2012-07-30
Release date:2012-08-15
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Crystal Structure of the DNA-Binding Domain of Human Chd1.
To be Published
4AX0
DownloadVisualize
BU of 4ax0 by Molmil
Q157A mutant. Crystal Structure of the Mobile Metallo-beta-Lactamase AIM-1 from Pseudomonas aeruginosa: Insights into Antibiotic Binding and the role of Gln157
Descriptor: ACETATE ION, CALCIUM ION, METALLO-BETA-LACTAMASE AIM-1, ...
Authors:Leiros, H.-K.S, Borra, P.S, Brandsdal, B.O, Edvardsen, K.S.W, Spencer, J, Walsh, T.R, Samuelsen, O.
Deposit date:2012-06-06
Release date:2012-06-20
Last modified:2018-06-20
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Crystal Structure of the Mobile Metallo-Beta-Lactamase Aim-1 from Pseudomonas Aeruginosa: Insights Into Antibiotic Binding and the Role of Gln157
Antimicrob.Agents Chemother., 56, 2012
4A5W
DownloadVisualize
BU of 4a5w by Molmil
Crystal structure of C5b6
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, COMPLEMENT C5, ...
Authors:Hadders, M.A, Bubeck, D, Forneris, F, Pangburn, M, Llorca, O, Lea, S.M, Gros, P.
Deposit date:2011-10-28
Release date:2012-03-14
Last modified:2024-07-24
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Assembly and Regulation of the Membrane Attack Complex Based on Structures of C5B6 and Sc5B9.
Cell Rep., 1, 2012
4AHS
DownloadVisualize
BU of 4ahs by Molmil
Parallel screening of a low molecular weight compound library: do differences in methodology affect hit identification
Descriptor: 1,2-ETHANEDIOL, 1-BENZOFURAN-7-CARBOXYLIC ACID, ACETATE ION, ...
Authors:Wielens, J, Heady, S.J, Rhodes, D.I, Mulder, R.J, Dolezal, O, Deadman, J.J, Newman, J, Chalmers, D.K, Parker, M.W, Peat, T.S, Scanlon, M.J.
Deposit date:2012-02-07
Release date:2012-12-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Parallel Screening of Low Molecular Weight Fragment Libraries: Do Differences in Methodology Affect Hit Identification?
J.Biomol.Screen, 18, 2013
4A92
DownloadVisualize
BU of 4a92 by Molmil
Full-length HCV NS3-4A protease-helicase in complex with a macrocyclic protease inhibitor.
Descriptor: (1'R,2R,2'S,6S,24AS)-17-FLUORO-6-(1-METHYL-2-OXOPIPERIDINE-3-CARBOXAMIDO)-19,19-DIOXIDO-5,21,24-TRIOXO-2'-VINYL-1,2,3,5,6,7,8,9,10,11,12,13,14,20,21,23,24,24A-OCTADECAHYDROSPIRO[BENZO[S]PYRROLO[2,1-G][1,2,5,8,18]THIATETRAAZACYCLOICOSINE-22,1'-CYCLOPRO-2-CARBOXYLATEPAN]-2-YL 4-FLUOROISOINDOLINE, SERINE PROTEASE NS3, ZINC ION
Authors:Schiering, N, D'Arcy, A, Simic, O, Eder, J, Raman, P, Svergun, D.I, Bodendorf, U.
Deposit date:2011-11-23
Release date:2011-12-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.73 Å)
Cite:A Macrocyclic Hcv Ns3/4A Protease Inhibitor Interacts with Protease and Helicase Residues in the Complex with its Full- Length Target.
Proc.Natl.Acad.Sci.USA, 108, 2011
4B9F
DownloadVisualize
BU of 4b9f by Molmil
High resolution structure for family 3a carbohydrate binding module from the cipA scaffolding of clostridium thermocellum
Descriptor: CALCIUM ION, CELLULOSOMAL-SCAFFOLDING PROTEIN A, SULFATE ION
Authors:Yaniv, O, Shimon, L.J.W, Bayer, E.A, Lamed, R, Frolow, F.
Deposit date:2012-09-04
Release date:2012-09-12
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:High Resolution Structure of the Family 3A Carbohydrate-Binding Module from the Mafor Scaffoldin Subunit Cipa of Clostridium Thermocellum
To be Published
4B5Z
DownloadVisualize
BU of 4b5z by Molmil
Structure of the apo-rFnBPA(189-505) from Staphylococcus aureus
Descriptor: FIBRONECTIN-BINDING PROTEIN A
Authors:Stemberk, V, Moroz, O, Atkin, K.E, Turkenburg, J.P, Potts, J.R.
Deposit date:2012-08-08
Release date:2013-10-09
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Evidence for Steric Regulation of Fibrinogen Binding to Staphylococcus Aureus Fibronectin-Binding Protein a (Fnbpa).
J.Biol.Chem., 289, 2014
4B9C
DownloadVisualize
BU of 4b9c by Molmil
Biomass sensoring modules from putative Rsgi-like proteins of Clostridium thermocellum resemble family 3 carbohydrate-binding module of cellulosome
Descriptor: CALCIUM ION, TYPE 3A CELLULOSE-BINDING DOMAIN PROTEIN
Authors:Yaniv, O, Shimon, L.J.W, Bayer, E.A, Lamed, R, Frolow, F.
Deposit date:2012-09-04
Release date:2013-09-11
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.171 Å)
Cite:Fine-Structural Variance of Family 3 Carbohydrate-Binding Modules as Extracellular Biomass-Sensing Components of Clostridium Thermocellum Anti-Sigma(I) Factors.
Acta Crystallogr.,Sect.D, 70, 2014
4BDL
DownloadVisualize
BU of 4bdl by Molmil
Crystal structure of the GluK2 K531A LBD dimer in complex with glutamate
Descriptor: GLUTAMATE RECEPTOR, IONOTROPIC KAINATE 2, GLUTAMIC ACID, ...
Authors:Nayeem, N, Mayans, O, Green, T.
Deposit date:2012-10-05
Release date:2013-04-10
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Correlating Efficacy and Desensitization with Gluk2 Ligand-Binding Domain Movements.
Open Biol., 3, 2013
4B97
DownloadVisualize
BU of 4b97 by Molmil
Biomass sensing modules from putative Rsgi-like proteins of Clostridium thermocellum resemble family 3 carbohydrate-binding module of cellulosome
Descriptor: CALCIUM ION, CELLULOSE BINDING DOMAIN-CONTAINING PROTEIN
Authors:Yaniv, O, Fichman, G, Shimon, L.J.W, Bayer, E.A, Lamed, R, Frolow, F.
Deposit date:2012-09-03
Release date:2013-09-11
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.276 Å)
Cite:Fine-Structural Variance of Family 3 Carbohydrate-Binding Modules as Extracellular Biomass-Sensing Components of Clostridium Thermocellum Anti-Sigma(I) Factors.
Acta Crystallogr.,Sect.D, 70, 2014
4ANJ
DownloadVisualize
BU of 4anj by Molmil
MYOSIN VI (MDinsert2-GFP fusion) PRE-POWERSTROKE STATE (MG.ADP.AlF4)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CALCIUM ION, CALMODULIN, ...
Authors:Menetrey, J, Isabet, T, Ropars, V, Mukherjea, M, Pylypenko, O, Liu, X, Perez, J, Vachette, P, Sweeney, H.L, Houdusse, A.M.
Deposit date:2012-03-19
Release date:2012-10-17
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Processive Steps in the Reverse Direction Require Uncoupling of the Lead Head Lever Arm of Myosin Vi.
Mol.Cell, 48, 2012

223532

数据于2024-08-07公开中

PDB statisticsPDBj update infoContact PDBjnumon