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PDB: 7462 件

1VYB
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Endonuclease domain of human LINE1 ORF2p
分子名称: GLYCEROL, ORF2 CONTAINS A REVERSE TRANSCRIPTASE DOMAIN, SULFATE ION, ...
著者Weichenrieder, O, Repanas, K, Perrakis, A.
登録日2004-04-25
公開日2004-06-04
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of the targeting endonuclease of the human LINE-1 retrotransposon.
Structure, 12, 2004
8CCI
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Crystal structure of Mycobacterium smegmatis thioredoxin reductase
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, MAGNESIUM ION, ...
著者Fuesser, F.T, Koch, O, Kuemmel, D.
登録日2023-01-27
公開日2023-07-26
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Novel starting points for fragment-based drug design against mycobacterial thioredoxin reductase identified using crystallographic fragment screening.
Acta Crystallogr D Struct Biol, 79, 2023
1QPY
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CRYSTAL STRUCTURE OF BACKBONE MODIFIED PNA HEXAMER
分子名称: PEPTIDE NUCLEIC ACID 5'-(*CP1*GPN*TP1*APN*CP1*GPN*LYS)-3'
著者Haima, G, Rasmussen, H, Schmidt, G, Jensen, D.K, Kastrup, J.S, Stafshede, P.W, Norden, B, Buchardt, O, Nielsen, P.E.
登録日1999-05-14
公開日2001-02-21
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Peptide Nucleic Acids (PNA) derived from N-(N-methylaminoethyl)glycine. Synthesis, hybridization and structural properties
New J.Chem., 23, 1999
1QXN
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Solution Structure of the 30 kDa Polysulfide-sulfur Transferase Homodimer from Wolinella Succinogenes
分子名称: PENTASULFIDE-SULFUR, sulfide dehydrogenase
著者Lin, Y.J, Dancea, F, Loehr, F, Klimmek, O, Pfeiffer-Marek, S, Nilges, M, Wienk, H, Kroeger, A, Rueterjans, H.
登録日2003-09-08
公開日2004-02-24
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献Solution Structure of the 30 kDa Polysulfide-Sulfur Transferase Homodimer from Wolinella succinogenes
Biochemistry, 43, 2004
1QX6
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Crystal structure of Sortase B complexed with E-64
分子名称: N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE, NPQTN specific sortase B
著者Zong, Y, Mazmanian, S.K, Schneewind, O, Narayana, S.V.
登録日2003-09-04
公開日2004-04-06
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献The structure of sortase B, a cysteine transpeptidase that tethers surface protein to the Staphylococcus aureus cell wall
Structure, 12, 2004
1QXD
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Structural Basis for the Potent Antisickling Effect of a Novel Class of 5-Membered Heterocyclic Aldehydic Compounds
分子名称: FURFURAL, Hemoglobin alpha chain, Hemoglobin beta chain, ...
著者Safo, M.K, Abdulmalik, O, Danso-Danquah, R, Nokuri, S, Joshi, G.S, Musayev, F.N, Asakura, T, Abraham, D.J.
登録日2003-09-05
公開日2003-09-16
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural basis for the potent antisickling effect of a novel class of five-membered heterocyclic aldehydic compounds
J.Med.Chem., 47, 2004
1VDR
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DIHYDROFOLATE REDUCTASE
分子名称: DIHYDROFOLATE REDUCTASE, PHOSPHATE ION
著者Pieper, U, Herzberg, O.
登録日1997-11-30
公開日1998-02-25
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structural features of halophilicity derived from the crystal structure of dihydrofolate reductase from the Dead Sea halophilic archaeon, Haloferax volcanii.
Structure, 6, 1998
3TQ5
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BU of 3tq5 by Molmil
Crystal structure of M-PMV dUTPASE post-inversion product (dUMP) COMPLEX
分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDO HYDROLASE
著者Barabas, O, Nemeth, V, Vertessy, B.G.
登録日2011-09-09
公開日2011-10-12
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural Snapshots of Enzyme-Catalysed Phosphate Ester Hydrolysis Directly Visualize In-line Attack and Inversion
to be published
8C09
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Crystal structure of JAK2 JH2-I559F
分子名称: Tyrosine-protein kinase JAK2
著者Haikarainen, T, Silvennoinen, O.
登録日2022-12-16
公開日2023-12-27
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Molecular basis of JAK2 activation in erythropoietin receptor and pathogenic JAK2 signaling.
Sci Adv, 10, 2024
8C0A
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Crystal structure of JAK2 JH2-R683S
分子名称: 3,5-diphenyl-2-(trifluoromethyl)-1~{H}-pyrazolo[1,5-a]pyrimidin-7-one, GLYCEROL, Tyrosine-protein kinase JAK2
著者Haikarainen, T, Silvennoinen, O.
登録日2022-12-16
公開日2023-12-27
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Molecular basis of JAK2 activation in erythropoietin receptor and pathogenic JAK2 signaling.
Sci Adv, 10, 2024
1NQJ
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CRYSTAL STRUCTURE OF CLOSTRIDIUM HISTOLYTICUM COLG COLLAGENASE COLLAGEN-BINDING DOMAIN 3B AT 1.0 ANGSTROM RESOLUTION IN ABSENCE OF CALCIUM
分子名称: CHLORIDE ION, LITHIUM ION, class 1 collagenase
著者Wilson, J.J, Matsushita, O, Okabe, A, Sakon, J.
登録日2003-01-21
公開日2003-04-15
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献A bacterial collagen-binding domain with novel calcium-binding motif controls domain orientation
Embo J., 22, 2003
1OB2
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E. coli elongation factor EF-Tu complexed with the antibiotic kirromycin, a GTP analog, and Phe-tRNA
分子名称: ELONGATION FACTOR TU, KIRROMYCIN, MAGNESIUM ION, ...
著者Kristensen, O, Nissen, P, Nyborg, J.
登録日2003-01-24
公開日2004-05-27
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (3.35 Å)
主引用文献Kirromycin Defines a Specific Domain Arrangement of Elongation Factor EF-TU
To be Published
1QXE
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BU of 1qxe by Molmil
Structural Basis for the Potent Antisickling Effect of a Novel Class of 5-Membered Heterocyclic Aldehydic Compounds
分子名称: 5-HYDROXYMETHYL-FURFURAL, Hemoglobin alpha chain, Hemoglobin beta chain, ...
著者Safo, M.K, Abdulmalik, O, Danso-Danquah, R, Nokuri, S, Joshi, G.S, Musayev, F.N, Asakura, T, Abraham, D.J.
登録日2003-09-05
公開日2003-09-16
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural basis for the potent antisickling effect of a novel class of five-membered heterocyclic aldehydic compounds
J.Med.Chem., 47, 2004
1QXA
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Crystal structure of Sortase B complexed with Gly3
分子名称: 2-(TRIMETHYLAMMONIUM)ETHYL THIOL, NPQTN specific sortase B, peptide GLY-GLY-GLY
著者Zong, Y, Mazmanian, S.K, Schneewind, O, Narayana, S.V.
登録日2003-09-05
公開日2004-04-06
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The structure of sortase B, a cysteine transpeptidase that tethers surface protein to the Staphylococcus aureus cell wall
Structure, 12, 2004
8EW3
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BU of 8ew3 by Molmil
Cryo EM structure of Vibrio cholerae NQR
分子名称: FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, Na(+)-translocating NADH-quinone reductase subunit A, ...
著者Fuller, J.R, Juarez, O.
登録日2022-10-21
公開日2022-11-16
実験手法ELECTRON MICROSCOPY (2.65159 Å)
主引用文献Novel cofactor binding motifs, electron transfer and ion pumping mechanisms of the respiratory complex NQR
To Be Published
8EVU
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BU of 8evu by Molmil
Cryo EM structure of Vibrio cholerae NQR
分子名称: FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, Na(+)-translocating NADH-quinone reductase subunit A, ...
著者Fuller, J.R, Juarez, O.
登録日2022-10-20
公開日2022-11-16
実験手法ELECTRON MICROSCOPY (2.5804 Å)
主引用文献Novel cofactor binding motifs, electron transfer and ion pumping mechanisms of the respiratory complex NQR
To Be Published
3TS6
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BU of 3ts6 by Molmil
Crystal structure of M-PMV DUTPASE relaxed end-product (dUMP) complex
分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDO HYDROLASE
著者Nemeth, V, Barabas, O, Vertessy, G.B.
登録日2011-09-12
公開日2011-10-12
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Structural Snapshots of Enzyme-Catalysed Phosphate Ester Hydrolysis Directly Visualize in-Line Attack and Inversion
To be Published
1VC3
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BU of 1vc3 by Molmil
Crystal Structure of L-Aspartate-alpha-Decarboxylase
分子名称: L-Aspartate-alpha-Decarboxylase heavy chain, L-Aspartate-alpha-Decarboxylase light chain
著者Nakajima, O, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-03-04
公開日2005-06-28
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal Structure of L-Aspartate-alpha-Decarboxylase
TO BE PUBLISHED
1V2X
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BU of 1v2x by Molmil
TrmH
分子名称: PHOSPHATE ION, S-ADENOSYLMETHIONINE, tRNA (Gm18) methyltransferase
著者Nureki, O, Watanabe, K, Fukai, S, Ishii, R, Endo, Y, Hori, H, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-10-17
公開日2004-05-04
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Deep Knot Structure for Construction of Active Site and Cofactor Binding Site of tRNA Modification Enzyme
STRUCTURE, 12, 2004
1QJH
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Protein Aggregation and Alzheimer's Disease: Crystallographic Analysis of the Phenomenon. Engineered version of the ribosomal protein S6 used as a stable scaffold to study oligomerization.
分子名称: 30S ribosomal protein S6, MAGNESIUM ION
著者Kristensen, O, Otzen, D.E, Oliveberg, M.
登録日1999-06-24
公開日2000-06-29
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Designed protein tetramer zipped together with a hydrophobic Alzheimer homology: a structural clue to amyloid assembly.
Proc. Natl. Acad. Sci. U.S.A., 97, 2000
1QDB
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CYTOCHROME C NITRITE REDUCTASE
分子名称: CALCIUM ION, CYTOCHROME C NITRITE REDUCTASE, HEME C, ...
著者Einsle, O, Messerschmidt, A, Stach, P, Huber, R, Kroneck, P.M.H.
登録日1999-05-19
公開日1999-08-18
最終更新日2021-03-03
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of cytochrome c nitrite reductase.
Nature, 400, 1999
8CQW
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BU of 8cqw by Molmil
Crystal structure of the Candida albicans 80S ribosome in complex with Hygromycin B
分子名称: 18S, 25S, 3-O-acetyl-2-O-(3-O-acetyl-6-deoxy-beta-D-glucopyranosyl)-6-deoxy-1-O-{[(2R,2'S,3a'R,4''S,5''R,6'S,7a'S)-5''-methyl-4''-{[(2E)-3-phenylprop-2-enoyl]oxy}decahydrodispiro[oxirane-2,3'-[1]benzofuran-2',2''-pyran]-6'-yl]carbonyl}-beta-D-glucopyranose, ...
著者Kolosova, O, Zgadzay, Y, Yusupov, M.
登録日2023-03-07
公開日2024-09-18
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Drug-induced rotational movement of the ribosome is a key factor for read-through enhancement
To Be Published
8CAS
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BU of 8cas by Molmil
Cryo-EM structure of native Otu2-bound ubiquitinated 48S initiation complex (partial)
分子名称: 18S ribosomal RNA, 40S ribosomal protein S0-A, 40S ribosomal protein S1-A, ...
著者Ikeuchi, K, Buschauer, R, Cheng, J, Berninghausen, O, Becker, T, Beckmann, R.
登録日2023-01-24
公開日2023-05-24
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Molecular basis for recognition and deubiquitination of 40S ribosomes by Otu2.
Nat Commun, 14, 2023
8CBJ
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Cryo-EM structure of Otu2-bound cytoplasmic pre-40S ribosome biogenesis complex
分子名称: 20S pre-ribosomal RNA, 20S-pre-rRNA D-site endonuclease NOB1, 40S ribosomal protein S0-A, ...
著者Ikeuchi, K, Buschauer, R, Cheng, J, Berninghausen, O, Becker, T, Beckmann, R.
登録日2023-01-25
公開日2023-05-24
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Molecular basis for recognition and deubiquitination of 40S ribosomes by Otu2.
Nat Commun, 14, 2023
8CQ7
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Crystal structure of phyllanthoside bound to the Candida albicans 80S ribosome
分子名称: 18S, 25S, 3-O-acetyl-2-O-(3-O-acetyl-6-deoxy-beta-D-glucopyranosyl)-6-deoxy-1-O-{[(2R,2'S,3a'R,4''S,5''R,6'S,7a'S)-5''-methyl-4''-{[(2E)-3-phenylprop-2-enoyl]oxy}decahydrodispiro[oxirane-2,3'-[1]benzofuran-2',2''-pyran]-6'-yl]carbonyl}-beta-D-glucopyranose, ...
著者Kolosova, O, Zgadzay, Y, Yusupov, M.
登録日2023-03-03
公開日2024-09-11
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Drug-induced rotational movement of the ribosome is a key factor for read-through enhancement
To Be Published

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件を2024-10-16に公開中

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