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PDB: 249 results

3EUR
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BU of 3eur by Molmil
Crystal structure of the C-terminal domain of uncharacterized protein from Bacteroides fragilis NCTC 9343
Descriptor: uncharacterized protein
Authors:Nocek, B, Tesar, C, Cobb, G, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-10-10
Release date:2008-12-02
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structure of the C-terminal domain of uncharacterized protein from Bacteroides fragilis NCTC 9343
To be Published
3E9A
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BU of 3e9a by Molmil
Crystal structure of 2-dehydro-3-deoxyphosphooctonate aldolase from Vibrio cholerae O1 biovar eltor str. N16961
Descriptor: 2-dehydro-3-deoxyphosphooctonate aldolase, SULFATE ION
Authors:Nocek, B, Mulligan, R, Kwon, K, Joachimiak, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2008-08-21
Release date:2008-09-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of 2-dehydro-3-deoxyphosphooctonate aldolase from Vibrio cholerae O1 biovar eltor str. N16961
To be Published
2P06
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BU of 2p06 by Molmil
Crystal structure of a predicted coding region AF_0060 from Archaeoglobus fulgidus DSM 4304
Descriptor: GLYCEROL, Hypothetical protein AF_0060, MAGNESIUM ION
Authors:Nocek, B, Xu, X, Koniyenko, Y, Yakounine, A, Savchenko, A, Edwards, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-02-28
Release date:2007-03-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of a predicted coding region AF_0060 from Archaeoglobus fulgidus DSM 4304
To be Published
2P3P
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BU of 2p3p by Molmil
Structure of a domain of an uncharacterized protein PG_1388 from Porphyromonas gingivalis W83
Descriptor: Hypothetical protein, MAGNESIUM ION
Authors:Nocek, B, Hatzos, C, Moy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-03-09
Release date:2007-04-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Structure of a domain of an uncharacterized protein PG_1388 from Porphyromonas gingivalis W83
To be Published
2NPN
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BU of 2npn by Molmil
Crystal structure of putative cobalamin synthesis related protein (CobF) from Corynebacterium diphtheriae
Descriptor: GLYCEROL, MAGNESIUM ION, Putative cobalamin synthesis related protein, ...
Authors:Nocek, B, Zhou, M, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-10-27
Release date:2006-11-28
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of cobalamin synthesis related protein (CobF) from Corynebacterium diphtheriae
To be Published
2PHN
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BU of 2phn by Molmil
Crystal structure of an amide bond forming F420-gamma glutamyl ligase from Archaeoglobus fulgidus
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, F420-0:gamma-glutamyl ligase, ...
Authors:Nocek, B, Evdokimova, E, Kudritska, M, Edwards, A, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-04-11
Release date:2007-05-15
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structure of an Amide Bond Forming F(420):gammagamma-glutamyl Ligase from Archaeoglobus Fulgidus - A Member of a New Family of Non-ribosomal Peptide Synthases.
J.Mol.Biol., 372, 2007
2PLI
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BU of 2pli by Molmil
Crystal structure of putative Mg2+ and Co2+ transporter(CorC)associated region from Neisseria meningitidis MC58
Descriptor: ACETATE ION, GLYCEROL, Uncharacterized protein, ...
Authors:Nocek, B, Duggan, E, Gu, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-04-19
Release date:2007-05-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of putative Mg2+ and Co2+ transporter(CorC)associated region from Neisseria meningitidis MC58.
To be Published
4I9V
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BU of 4i9v by Molmil
The atomic structure of 5-Hydroxymethyl 2'-deoxycitidine base paired with 2'-deoxyguanosine in Dickerson Drew Dodecamer
Descriptor: DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(5HC)P*GP*CP*G)-3'), MAGNESIUM ION, SPERMINE (FULLY PROTONATED FORM)
Authors:Nocek, B, Szulik, M.W, Joachimiak, A, Stone, M.P.
Deposit date:2012-12-05
Release date:2013-11-20
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.02 Å)
Cite:Differential stabilities and sequence-dependent base pair opening dynamics of watson-crick base pairs with 5-hydroxymethylcytosine, 5-formylcytosine, or 5-carboxylcytosine.
Biochemistry, 54, 2015
4IC1
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BU of 4ic1 by Molmil
Crystal structure of SSO0001
Descriptor: IRON/SULFUR CLUSTER, MANGANESE (II) ION, Uncharacterized protein
Authors:Nocek, B, Skarina, T, Lemak, S, Beloglazova, N, Flick, R, Brown, G, Savchenko, A, Joachimiak, A, Yakunin, A.F, Midwest Center for Structural Genomics (MCSG)
Deposit date:2012-12-09
Release date:2013-01-16
Last modified:2014-07-02
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Toroidal structure and DNA cleavage by the CRISPR-associated [4Fe-4S] cluster containing Cas4 nuclease SSO0001 from Sulfolobus solfataricus.
J.Am.Chem.Soc., 135, 2013
4INJ
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BU of 4inj by Molmil
Crystal structure of the S111A mutant of member of MccF clade from Listeria monocytogenes EGD-e with product
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, Lmo1638 protein, ...
Authors:Nocek, B, Tikhonov, A, Severinov, K, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2013-01-04
Release date:2013-02-20
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the S111A mutant of member of MccF clade from Listeria monocytogenes EGD-e with product
To be Published
5DPO
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BU of 5dpo by Molmil
The crystal structure of uncharacterized protein (LPG2149) from Legionella pneumophila
Descriptor: Uncharacterized protein
Authors:Nocek, B, Cuff, M, Evdokimova, E, Joachimiak, A, Savchenko, A.
Deposit date:2015-09-13
Release date:2015-11-25
Method:X-RAY DIFFRACTION (1.644 Å)
Cite:The crystal structure of uncharacterized protein (LPG2149) from Legionella pneumophila
To Be Published
5DYF
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BU of 5dyf by Molmil
The crystal structure of Aminopeptidase N in complex with N-benzyl-1,2-diaminoethylphosphonic acid
Descriptor: Aminopeptidase N, GLYCEROL, IMIDAZOLE, ...
Authors:Nocek, B, Joachimiak, A, Vassiliou, S, Berlicki, L, Mucha, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2015-09-24
Release date:2015-11-25
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.854 Å)
Cite:The crystal structure of Aminopeptidase N in complex with N-benzyl-1,2-diaminoethylphosphonic acid
To Be Published
4JVO
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BU of 4jvo by Molmil
Crystal structure of the double mutant (S112A, H303A) of B.anthracis mycrocine immunity protein (MccF) with alanyl sulfamoyl adenylates
Descriptor: '5'-O-(N-(L-ALANYL)-SULFAMOYL)ADENOSINE, GLYCEROL, Microcin immunity protein MccF
Authors:Nocek, B, Tikhonov, A, Severinov, K, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2013-03-25
Release date:2013-06-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structure of the double mutant (S112A, H303A) of B.anthracis mycrocine immunity protein (MccF) with alanyl sulfamoyl adenylates
TO BE PUBLISHED
4H2K
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BU of 4h2k by Molmil
Crystal structure of the catalytic domain of succinyl-diaminopimelate desuccinylase from Haemophilus influenzae
Descriptor: Succinyl-diaminopimelate desuccinylase, ZINC ION
Authors:Nocek, B, Jedrzejczak, R, Makowska-Grzyska, M, Starus, A, Holz, R, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2012-09-12
Release date:2012-11-21
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:The dimerization domain in DapE enzymes is required for catalysis.
Plos One, 9, 2014
4KQ9
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BU of 4kq9 by Molmil
Crystal structure of periplasmic ribose ABC transporter from Conexibacter woesei DSM 14684
Descriptor: GLYCEROL, Ribose ABC transporter, substrate binding protein
Authors:Nocek, B, Chhor, G, Endres, M, Babnigg, G, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-05-14
Release date:2013-05-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of periplasmic ribose ABC transporter from Conexibacter woesei DSM 14684
To be Published
5CR9
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BU of 5cr9 by Molmil
Crystal structure of ABC-type Fe3+-hydroxamate transport system from Saccharomonospora viridis DSM 43017
Descriptor: ABC-type Fe3+-hydroxamate transport system, periplasmic component, GLUTAMIC ACID, ...
Authors:Nocek, B, Cuff, M, Mack, J, Endres, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2015-07-22
Release date:2015-08-12
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of ABC-type Fe3+-hydroxamate transport system from Saccharomonospora viridis DSM 43017
To Be Published
5F5X
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BU of 5f5x by Molmil
Crystal structure of S116A Ba3275 with AMP bound
Descriptor: ADENOSINE MONOPHOSPHATE, MccC family protein Ba3275
Authors:Nocek, B, Severinov, K, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2015-12-04
Release date:2015-12-30
Last modified:2017-02-08
Method:X-RAY DIFFRACTION (2.006 Å)
Cite:Crystal structure of Ba3275-AMP complex from Bacillus cereus ATCC 10987
To Be Published
5F64
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BU of 5f64 by Molmil
Putative positive transcription regulator (sensor EvgS) from Shigella flexneri
Descriptor: Positive transcription regulator EvgA
Authors:Nocek, B, Osipiuk, J, Mulligan, R, Gu, M, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2015-12-05
Release date:2015-12-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Putative positive transcription regulator (sensor EvgS) from Shigella flexneri.
to be published
5F13
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BU of 5f13 by Molmil
Structure of Mn bound DUF89 from Saccharomyces cerevisiae
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, MANGANESE (II) ION, ...
Authors:Nocek, B, Skarina, T, Joachimiak, A, Savchenko, A, Yakunin, A.
Deposit date:2015-11-30
Release date:2016-03-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.393 Å)
Cite:A family of metal-dependent phosphatases implicated in metabolite damage-control.
Nat.Chem.Biol., 12, 2016
5F1Y
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BU of 5f1y by Molmil
Crystal structure of Ba3275, the member of S66 family of serine peptidases
Descriptor: GLYCEROL, MccC family protein
Authors:Nocek, B, Jedrzejczak, R, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2015-11-30
Release date:2015-12-30
Last modified:2016-08-17
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Crystal structure of S116A mutant of Ba3275, the member of S66 family of serine peptidases
To Be Published
4LZK
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BU of 4lzk by Molmil
Crystal structure of inclusion body protein (PixA pfam12306) from Burkholderia cenocepacia J2315
Descriptor: PixA inclusion body protein
Authors:Nocek, B, Li, H, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-07-31
Release date:2013-11-13
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Crystal structure of inclusion body protein (PixA pfam12306) from Burkholderia cenocepacia J2315
TO BE PUBLISHED
4LPQ
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BU of 4lpq by Molmil
Crystal structure of the L,D-transpeptidase (residues 123-326) from Xylanimonas cellulosilytica DSM 15894
Descriptor: CHLORIDE ION, ErfK/YbiS/YcfS/YnhG family protein
Authors:Nocek, B, Bigelow, L, Endres, M, Babnigg, G, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-07-16
Release date:2013-11-13
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Crystal structure of the L,D-transpeptidase (residues 123-326) from Xylanimonas cellulosilytica DSM 15894
To be Published
5UEJ
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BU of 5uej by Molmil
1.30 A crystal structure of DapE enzyme from Neisseria meningitidis MC58
Descriptor: SULFATE ION, Succinyl-diaminopimelate desuccinylase, ZINC ION
Authors:Nocek, B, Joachimiak, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2017-01-02
Release date:2017-02-01
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:1.30 A crystal structure of DapE enzyme from Neisseria meningitidis MC58
To Be Published
5VO3
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BU of 5vo3 by Molmil
Crystal structure of DapE in complex with the products (succinic acid and diaminopimelic acid)
Descriptor: 2,6-DIAMINOPIMELIC ACID, SUCCINIC ACID, Succinyl-diaminopimelate desuccinylase, ...
Authors:Nocek, B.
Deposit date:2017-05-01
Release date:2018-07-25
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.954 Å)
Cite:Structural Evidence of a Major Conformational Change Triggered by Substrate Binding in DapE Enzymes: Impact on the Catalytic Mechanism.
Biochemistry, 57, 2018
5ULB
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BU of 5ulb by Molmil
Crystal structure of sugar ABC transporter from Yersinia enterocolitica subsp. enterocolitica 8081
Descriptor: 5-Se-methyl-5-seleno-alpha-D-ribofuranose, 5-Se-methyl-5-seleno-beta-D-ribofuranose, Putative sugar ABC transporter
Authors:Nocek, B, Bigelow, L, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2017-01-24
Release date:2018-09-12
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:Crystal structure of sugar ABC transporter from Yersinia enterocolitica subsp. enterocolitica 8081
To Be Published

223532

数据于2024-08-07公开中

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