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PDB: 40 results

5XQG
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Crystal structure of a PL 26 exo-rhamnogalacturonan lyase from Penicillium chrysogenum complexed with unsaturated galacturonosyl rhamnose
Descriptor: 2,6-anhydro-3-deoxy-L-threo-hex-2-enonic acid-(1-2)-alpha-L-rhamnopyranose, CALCIUM ION, Pcrglx protein
Authors:Kunishige, Y, Iwai, M, Tada, T, Nishimura, S, Sakamoto, T.
Deposit date:2017-06-07
Release date:2018-03-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:Crystal structure of exo-rhamnogalacturonan lyase from Penicillium chrysogenum as a member of polysaccharide lyase family 26
FEBS Lett., 592, 2018
5XQJ
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Crystal structure of a PL 26 exo-rhamnogalacturonan lyase from Penicillium chrysogenum complexed with unsaturated galacturonosyl rhamnose substituted with galactose
Descriptor: 2,6-anhydro-3-deoxy-L-threo-hex-2-enonic acid-(1-2)-[beta-D-galactopyranose-(1-4)]alpha-L-rhamnopyranose, 2,6-anhydro-3-deoxy-L-threo-hex-2-enonic acid-(1-2)-alpha-L-rhamnopyranose, CALCIUM ION, ...
Authors:Kunishige, Y, Iwai, M, Tada, T, Nishimura, S, Sakamoto, T.
Deposit date:2017-06-07
Release date:2018-04-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Crystal structure of exo-rhamnogalacturonan lyase from Penicillium chrysogenum as a member of polysaccharide lyase family 26
FEBS Lett., 592, 2018
6LK4
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Crystal structure of GMP reductase from Trypanosoma brucei in complex with guanosine 5'-triphosphate
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, Guanosine 5'-monophosphate Reductase, PHOSPHATE ION
Authors:Mase, H, Otani, T, Imamura, A, Nishimura, S, Inui, T.
Deposit date:2019-12-18
Release date:2020-03-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.503 Å)
Cite:Allosteric regulation accompanied by oligomeric state changes of Trypanosoma brucei GMP reductase through cystathionine-beta-synthase domain.
Nat Commun, 11, 2020
5XQ3
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BU of 5xq3 by Molmil
Crystal structure of a PL 26 exo-rhamnogalacturonan lyase from Penicillium chrysogenum
Descriptor: CALCIUM ION, Pcrglx protein
Authors:Kunishige, Y, Iwai, M, Tada, T, Nishimura, S, Sakamoto, T.
Deposit date:2017-06-06
Release date:2018-03-21
Last modified:2018-05-16
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Crystal structure of exo-rhamnogalacturonan lyase from Penicillium chrysogenum as a member of polysaccharide lyase family 26
FEBS Lett., 592, 2018
3A4W
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Crystal structures of catalytic site mutants of active domain 2 of thermostable chitinase from Pyrococcus furiosus complexed with chito-oligosaccharides
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase, MAGNESIUM ION, ...
Authors:Tsuji, H, Nishimura, S, Inui, T, Ishikawa, K, Nakamura, T, Uegaki, K.
Deposit date:2009-07-22
Release date:2010-06-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Kinetic and crystallographic analyses of the catalytic domain of chitinase from Pyrococcus furiosus- the role of conserved residues in the active site
Febs J., 277, 2010
2RVA
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Solution structure of chitosan-binding module 2 derived from chitosanase/glucanase from Paenibacillus sp. IK-5
Descriptor: Glucanase
Authors:Shinya, S, Nishimura, S, Fukamizo, T.
Deposit date:2015-05-13
Release date:2016-04-06
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Mechanism of chitosan recognition by CBM32 carbohydrate-binding modules from a Paenibacillus sp. IK-5 chitosanase/glucanase.
Biochem.J., 473, 2016
2RV9
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Solution structure of chitosan-binding module 1 derived from chitosanase/glucanase from Paenibacillus sp. IK-5
Descriptor: Glucanase
Authors:Shinya, S, Nishimura, S, Fukamizo, T.
Deposit date:2015-05-12
Release date:2016-04-06
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Mechanism of chitosan recognition by CBM32 carbohydrate-binding modules from a Paenibacillus sp. IK-5 chitosanase/glucanase.
Biochem.J., 473, 2016
2RNG
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Solution structure of big defensin
Descriptor: Big defensin
Authors:Kouno, T, Fujitani, N, Osaki, T, Kawabata, S, Nishimura, S, Mizuguchi, M, Aizawa, T, Demura, M, Nitta, K, Kawano, K.
Deposit date:2007-12-27
Release date:2008-10-14
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:A novel beta-defensin structure: a potential strategy of big defensin for overcoming resistance by Gram-positive bacteria
Biochemistry, 47, 2008
2RQ0
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Solution Structure of Mouse Lipocalin-type Prostaglandin D Synthase Possessing the Intrinsic Disulfide Bond
Descriptor: Prostaglandin-H2 D-isomerase
Authors:Miyamoto, Y, Nishimura, S, Inui, T.
Deposit date:2008-12-24
Release date:2009-12-15
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural analysis of lipocalin-type prostaglandin D synthase complexed with biliverdin by small-angle X-ray scattering and multi-dimensional NMR.
J.Struct.Biol., 2009
1GIJ
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HUMAN CYCLIN DEPENDENT KINASE 2 COMPLEXED WITH THE CDK4 INHIBITOR
Descriptor: 1-(5-OXO-2,3,5,9B-TETRAHYDRO-1H-PYRROLO[2,1-A]ISOINDOL-9-YL)-3-(5-PYRROLIDIN-2-YL-1H-PYRAZOL-3-YL)-UREA, CELL DIVISION PROTEIN KINASE 2
Authors:Ikuta, M, Nishimura, S.
Deposit date:2001-02-06
Release date:2002-02-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystallographic approach to identification of cyclin-dependent kinase 4 (CDK4)-specific inhibitors by using CDK4 mimic CDK2 protein.
J.Biol.Chem., 276, 2002
1GII
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HUMAN CYCLIN DEPENDENT KINASE 2 COMPLEXED WITH THE CDK4 INHIBITOR
Descriptor: 1-(5-OXO-2,3,5,9B-TETRAHYDRO-1H-PYRROLO[2,1-A]ISOINDOL-9-YL)-3-PYRIDIN-2-YL-UREA, CELL DIVISION PROTEIN KINASE 2
Authors:Ikuta, M, Nishimura, S.
Deposit date:2001-02-06
Release date:2002-02-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystallographic approach to identification of cyclin-dependent kinase 4 (CDK4)-specific inhibitors by using CDK4 mimic CDK2 protein.
J.Biol.Chem., 276, 2001
1GIH
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BU of 1gih by Molmil
HUMAN CYCLIN DEPENDENT KINASE 2 COMPLEXED WITH THE CDK4 INHIBITOR
Descriptor: 1-(5-OXO-2,3,5,9B-TETRAHYDRO-1H-PYRROLO[2,1-A]ISOINDOL-9-YL)-3-PYRIDIN-2-YL-UREA, CELL DIVISION PROTEIN KINASE 2
Authors:Ikuta, M, Nishimura, S.
Deposit date:2001-02-06
Release date:2002-02-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystallographic approach to identification of cyclin-dependent kinase 4 (CDK4)-specific inhibitors by using CDK4 mimic CDK2 protein.
J.Biol.Chem., 276, 2001
2RR2
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BU of 2rr2 by Molmil
Structure of O-fucosylated epidermal growth factor-like repeat 12 of mouse Notch-1 receptor
Descriptor: Neurogenic locus notch homolog protein 1, alpha-L-fucopyranose
Authors:Hosoguchi, K, Shimizu, K, Fujitani, N, Nishimura, S.
Deposit date:2010-02-26
Release date:2010-10-13
Last modified:2020-07-29
Method:SOLUTION NMR
Cite:Chemical Synthesis, Folding, and Structural Insights into O-Fucosylated Epidermal Growth Factor-like Repeat 12 of Mouse Notch-1 Receptor
J.Am.Chem.Soc., 132, 2010
2RR0
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Structure of epidermal growth factor-like repeat 12 of mouse Notch-1 receptor
Descriptor: Neurogenic locus notch homolog protein 1
Authors:Hosoguchi, K, Shimizu, K, Fujitani, N, Nishimura, S.
Deposit date:2010-02-26
Release date:2010-10-13
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Chemical Synthesis, Folding, and Structural Insights into O-Fucosylated Epidermal Growth Factor-like Repeat 12 of Mouse Notch-1 Receptor
J.Am.Chem.Soc., 132, 2010
2RQZ
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Structure of sugar modified epidermal growth factor-like repeat 12 of mouse Notch-1 receptor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-alpha-L-fucopyranose, Neurogenic locus notch homolog protein 1
Authors:Shimizu, K, Fujitani, N, Hosoguchi, K, Nishimura, S.
Deposit date:2010-02-26
Release date:2010-10-13
Last modified:2020-07-29
Method:SOLUTION NMR
Cite:Chemical Synthesis, Folding, and Structural Insights into O-Fucosylated Epidermal Growth Factor-like Repeat 12 of Mouse Notch-1 Receptor
J.Am.Chem.Soc., 132, 2010
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