PDB Search results for query - Protein Data Bank Japan

PDB: 359 results

Structure of beta-glucosidase at atomic resolution from thermus thermophilus HB8
Descriptor:	GLYCEROL, beta-glycosidase
Authors:	Lokanath, N.K, Shiromizu, I, Miyano, M, Yokoyama, S, Kuramitsu, S, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:	2003-06-12
Release date:	2003-06-24
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (0.99 Å)
Cite:	Structure of Beta-Glucosidase at Atomic Resolution from Thermus Thermophilus Hb8 To be Published

1V7R

Structure of nucleotide triphosphate pyrophosphatase from pyrococcus horikoshii OT3
Descriptor:	CITRIC ACID, hypothetical protein PH1917
Authors:	Lokanath, N.K, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:	2003-12-22
Release date:	2003-12-30
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (1.4 Å)
Cite:	Structures of dimeric nonstandard nucleotide triphosphate pyrophosphatase from Pyrococcus horikoshii OT3: functional significance of interprotomer conformational changes. J.Mol.Biol., 375, 2008

1VDM

Crystal structure of purine phosphoribosyltransferase from Pyrococcus horikoshii Ot3
Descriptor:	purine phosphoribosyltransferase
Authors:	Sugahara, M, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:	2004-03-23
Release date:	2005-05-24
Last modified:	2023-12-27
Method:	X-RAY DIFFRACTION (2.5 Å)
Cite:	Crystal structure of purine phosphoribosyltransferase from Pyrococcus horikoshii Ot3 To be Published

1WW8

Crystal Structure of malic enzyme from Pyrococcus horikoshii Ot3
Descriptor:	malate oxidoreductase
Authors:	Lokanath, N.K, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:	2005-01-04
Release date:	2006-03-21
Last modified:	2011-07-13
Method:	X-RAY DIFFRACTION (2.5 Å)
Cite:	Crystal Structure of malic enzyme from Pyrococcus horikoshii Ot3 To be Published

1WL8

Crystal structure of PH1346 protein from Pyrococcus horikoshii
Descriptor:	ACETIC ACID, CHLORIDE ION, GMP synthase [glutamine-hydrolyzing] subunit A
Authors:	Lokanath, N.K, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:	2004-06-21
Release date:	2005-08-16
Last modified:	2023-11-15
Method:	X-RAY DIFFRACTION (1.45 Å)
Cite:	Crystal structure of Glutamide Amido Transferase from Pyrococcus horikoshii OT3 To be Published

1WO8

Crystal structure of methylglyoxal synthase from Thermus thermophilus HB8
Descriptor:	SULFATE ION, methylglyoxal synthase
Authors:	Sugahara, M, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:	2004-08-12
Release date:	2005-08-23
Last modified:	2024-03-13
Method:	X-RAY DIFFRACTION (1.7 Å)
Cite:	Crystal structure of methylglyoxal synthase from Thermus thermophilus HB8 To be Published

1WX1

Crystal structure of nictinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase from Thermus thermophilus HB8
Descriptor:	SODIUM ION, nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
Authors:	Asada, Y, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:	2005-01-19
Release date:	2005-02-01
Last modified:	2024-03-13
Method:	X-RAY DIFFRACTION (1.97 Å)
Cite:	Crystal structure of nictinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase from Thermus thermophilus HB8 To be Published

1X3L

Crystal structure of the PH0495 protein from pyrococccus horikoshii OT3
Descriptor:	1,2-ETHANEDIOL, SULFATE ION, hypothetical protein PH0495
Authors:	Mizutani, H, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:	2005-05-09
Release date:	2006-05-16
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (2.1 Å)
Cite:	Crystal structure of the PH0495 protein from pyrococccus horikoshii OT3 To be Published

1WMM

Crystal structure of PH1033 from Pyrococcus horikoshii Ot3
Descriptor:	Hypothetical UPF0310 protein PH1033
Authors:	Sugahara, M, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:	2004-07-12
Release date:	2005-08-23
Last modified:	2024-03-13
Method:	X-RAY DIFFRACTION (2.2 Å)
Cite:	Nucleant-mediated protein crystallization with the application of microporous synthetic zeolites. Acta Crystallogr.,Sect.D, 64, 2008

1WNL

Crystal Structure Of Biotin-(Acetyl-CoA-Carboxylase) ligase From Pyrococcus Horikoshii Ot3 in complex with ADP
Descriptor:	ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, biotin--[acetyl-CoA-carboxylase] ligase
Authors:	Bagautdinov, B, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:	2004-08-05
Release date:	2005-08-16
Last modified:	2024-04-03
Method:	X-RAY DIFFRACTION (1.6 Å)
Cite:	Crystal Structures of Biotin Protein Ligase from Pyrococcus horikoshii OT3 and its Complexes: Structural Basis of Biotin Activation J.Mol.Biol., 353, 2005

1WXQ

Crystal Structure of GTP binding protein from Pyrococcus horikoshii OT3
Descriptor:	GTP-binding protein
Authors:	Lokanath, N.K, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:	2005-01-29
Release date:	2006-04-18
Last modified:	2011-07-13
Method:	X-RAY DIFFRACTION (2.6 Å)
Cite:	Crystal Structure of GTP binding protein from Pyrococcus horikoshii OT3 To be Published

1VE3

Crystal structure of PH0226 protein from Pyrococcus horikoshii OT3
Descriptor:	S-ADENOSYLMETHIONINE, hypothetical protein PH0226
Authors:	Lokanath, N.K, Yamamoto, H, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:	2004-03-26
Release date:	2005-05-24
Last modified:	2023-12-27
Method:	X-RAY DIFFRACTION (2.1 Å)
Cite:	Crystal structure of SAM-dependent methyltransferase from Pyrococcus horikoshii. Acta Crystallogr.,Sect.F, 73, 2017

1WX0

Crystal structure of transaldolase from Thermus thermophilus HB8
Descriptor:	transaldolase
Authors:	Asada, Y, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:	2005-01-19
Release date:	2005-02-01
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (2.27 Å)
Cite:	Crystal structure of transaldolase from Thermus thermophilus HB8 To be Published

1WY2

Crystal Structure of the Prolidase from Pyrococcus horikoshii OT3
Descriptor:	CACODYLATE ION, GLYCEROL, MAGNESIUM ION, ...
Authors:	Mizutani, H, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:	2005-02-04
Release date:	2005-02-22
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (1.7 Å)
Cite:	Crystal Structure of the Prolidase from Pyrococcus horikoshii OT3 To be Published

1WZO

Crystal Structure of the HpcE from Thermus Thermophilus HB8
Descriptor:	GLYCEROL, HpcE, SODIUM ION, ...
Authors:	Mizutani, H, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:	2005-03-08
Release date:	2006-02-21
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (1.9 Å)
Cite:	Crystal Structure of the HpcE from Thermus Thermophilus HB8 To be Published

1WQW

Crystal Structure Of Biotin Protein Ligase From Pyrococcus Horikoshii Ot3 in complex with Biotinyl-5-AMP
Descriptor:	BIOTINYL-5-AMP, biotin--[acetyl-CoA-carboxylase] ligase
Authors:	Bagautdinov, B, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:	2004-10-04
Release date:	2005-10-04
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (1.45 Å)
Cite:	Crystal Structures of Biotin Protein Ligase from Pyrococcus horikoshii OT3 and its Complexes: Structural Basis of Biotin Activation J.Mol.Biol., 353, 2005

1WU2

Crystal Structure of molybdopterin biosynthesis moeA protein from Pyrococcus horikoshii OT3
Descriptor:	molybdopterin biosynthesis moeA protein
Authors:	Lokanath, N.K, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:	2004-11-30
Release date:	2004-12-07
Last modified:	2011-07-13
Method:	X-RAY DIFFRACTION (2.3 Å)
Cite:	Crystal Structure of molybdopterin biosynthesis moeA protein from Pyrococcus horikoshii OT3 To be Published

1WXJ

Crystal Structure Of Tryptophan Synthase A-Subunit with Indole-3-propanol phosphate From Thermus Thermophilus Hb8
Descriptor:	INDOLE-3-PROPANOL PHOSPHATE, SULFATE ION, tryptophan synthase alpha chain
Authors:	Asada, Y, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:	2005-01-24
Release date:	2005-02-01
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (1.7 Å)
Cite:	Crystal Structure Of Tryptophan Synthase A-Subunit with Indole-3-propanol phosphate From Thermus Thermophilus Hb8 To be Published

1WZ8

Crystal Structure of Probable Enoyl-CoA Dehydratase from Thermus Thermophilus HB8
Descriptor:	(4S)-2-METHYL-2,4-PENTANEDIOL, enoyl-CoA hydratase
Authors:	Bagautdinov, B, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:	2005-03-02
Release date:	2005-03-15
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (1.8 Å)
Cite:	Crystal Structure of Probable Enoyl-CoA Dehydratase from Thermus Thermophilus HB8 To be Published

1X1E

Crystal Structure of TT0495 protein from Thermus thermophilus HB8
Descriptor:	2-deoxy-D-gluconate 3-dehydrogenase
Authors:	Lokanath, N.K, Terao, Y, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:	2005-04-04
Release date:	2006-07-11
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (1.76 Å)
Cite:	Crystal Structure of TT0495 protein from Thermus thermophilus HB8 To be Published

1WM6

Crystal structure of TT0310 protein from Thermus thermophilus HB8
Descriptor:	CHLORIDE ION, phenylacetic acid degradation protein PaaI
Authors:	Sugahara, M, Kunishima, N, Miyano, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:	2004-07-04
Release date:	2005-07-05
Last modified:	2024-03-13
Method:	X-RAY DIFFRACTION (2.4 Å)
Cite:	A Novel Induced-fit Reaction Mechanism of Asymmetric Hot Dog Thioesterase PaaI J.Mol.Biol., 352, 2005

1WQ7

Crystal Structure Of Biotin-(Acetyl-CoA-Carboxylase) ligase From Pyrococcus Horikoshii Ot3
Descriptor:	biotin--[acetyl-CoA-carboxylase] ligase
Authors:	Bagautdinov, B, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:	2004-09-23
Release date:	2005-10-04
Last modified:	2024-03-13
Method:	X-RAY DIFFRACTION (1.6 Å)
Cite:	Crystal Structures of Biotin Protein Ligase from Pyrococcus horikoshii OT3 and its Complexes: Structural Basis of Biotin Activation J.Mol.Biol., 353, 2005

1WS9

Crystal structure of project ID TT0172 from Thermus thermophilus HB8
Descriptor:	acyl-CoA dehydrogenase
Authors:	Shimizu, K, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:	2004-11-02
Release date:	2005-10-18
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (2.3 Å)
Cite:	Crystal structure of project ID TT0172 from Thermus thermophilus HB8 To be Published

1WY0

Crystal structure of geranylgeranyl pyrophosphate synthetase from Pyrococcus horikoshii Ot3
Descriptor:	BROMIDE ION, MERCURY (II) ION, geranylgeranyl pyrophosphate synthetase
Authors:	Sugahara, M, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:	2005-02-03
Release date:	2006-02-14
Last modified:	2024-03-13
Method:	X-RAY DIFFRACTION (2.2 Å)
Cite:	Crystal structure of geranylgeranyl pyrophosphate synthetase from Pyrococcus horikoshii Ot3 To be Published

1WU8

Crystal structure of project PH0463 from Pyrococcus horikoshii OT3
Descriptor:	ADENOSINE, hypothetical protein PH0463
Authors:	Shimizu, K, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:	2004-12-02
Release date:	2005-11-29
Last modified:	2011-07-13
Method:	X-RAY DIFFRACTION (2.6 Å)
Cite:	Crystal structure of project ID PH0463 from Pyrococcus horikoshii OT3 To be Published

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Total results:	359
Displayed results:	25
Sorted by:	Hit score (from highest)
Deposition authors:	"Nishi, N"