6S0C
| Crystal structure of methionine gamma-lyase from Citrobacter freundii modified by dimethylthiosulfinate | Descriptor: | Cystathionine gamma-synthase, PYRIDOXAL-5'-PHOSPHATE, TRIETHYLENE GLYCOL | Authors: | Revtovich, S.V, Morozova, E.A, Nikulin, A.D, Demidkina, T.V. | Deposit date: | 2019-06-14 | Release date: | 2020-04-22 | Last modified: | 2024-01-24 | Method: | X-RAY DIFFRACTION (1.46 Å) | Cite: | Sulfoxides of sulfur-containing amino acids are suicide substrates of Citrobacter freundii methionine gamma-lyase. Structural bases of the enzyme inactivation. Biochimie, 168, 2020
|
|
3JW9
| Crystal structure of L-methionine gamma-lyase from Citrobacter freundii with S-ethyl-cysteine | Descriptor: | DI(HYDROXYETHYL)ETHER, Methionine gamma-lyase, S-ethyl-L-cysteine | Authors: | Revtovish, S.V, Nikulin, A.D, Morozova, E.A, Demidkina, T.V. | Deposit date: | 2009-09-18 | Release date: | 2010-09-08 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Three-dimensional structures of noncovalent complexes of Citrobacter freundii methionine gamma-lyase with substrates. Biochemistry Mosc., 76, 2011
|
|
3JWB
| Crystal structure of L-methionine gamma-lyase from Citrobacter freundii with norleucine | Descriptor: | DI(HYDROXYETHYL)ETHER, Methionine gamma-lyase, NORLEUCINE | Authors: | Revtovish, S.V, Nikulin, A.D, Morozova, E.A, Demidkina, T.V. | Deposit date: | 2009-09-18 | Release date: | 2010-09-08 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (1.63 Å) | Cite: | Three-dimensional structures of noncovalent complexes of Citrobacter freundii methionine gamma-lyase with substrates. Biochemistry Mosc., 76, 2011
|
|
3JWA
| Crystal structure of L-methionine gamma-lyase from Citrobacter freundii with methionine phosphinate | Descriptor: | (1-AMINO-3-METHYLSULFANYL-PROPYL)-PHOSPHINIC ACID, DI(HYDROXYETHYL)ETHER, Methionine gamma-lyase | Authors: | Revtovish, S.V, Nikulin, A.D, Morozova, E.A, Demidkina, T.V. | Deposit date: | 2009-09-18 | Release date: | 2010-09-08 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (1.45 Å) | Cite: | Three-dimensional structures of noncovalent complexes of Citrobacter freundii methionine gamma-lyase with substrates. Biochemistry Mosc., 76, 2011
|
|
4HF8
| Crystal structure of L-methionine gamma-lyase from Citrobacter freundii with glycine | Descriptor: | DI(HYDROXYETHYL)ETHER, GLYCINE, Methionine gamma-lyase, ... | Authors: | Revtovich, S.V, Morozova, E.A, Anufrieva, N.V, Nikulin, A.D, Demidkina, T.V. | Deposit date: | 2012-10-05 | Release date: | 2013-11-06 | Last modified: | 2023-12-06 | Method: | X-RAY DIFFRACTION (2.45 Å) | Cite: | Crystal structure of the external aldimine of Citrobacter freundii methionine gamma-lyase with glycine provides insight in mechanisms of two stages of physiological reaction and isotope exchange of alpha- and beta-protons of competitive inhibitors. Biochimie, 101, 2014
|
|
3I1F
| Gamma-subunit of the translation initiation factor 2 from S. solfataricus in complex with Gpp(CH2)p | Descriptor: | PHOSPHATE ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, Translation initiation factor 2 subunit gamma | Authors: | Stolboushkina, E.A, Nikonov, S.V, Nikulin, A.D, Blaesi, U, Garber, M.B, Nikonov, O.S. | Deposit date: | 2009-06-26 | Release date: | 2010-06-30 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | 5-prime-triphosphate end of mRNA recognizes the second GTP-binding site on the gamma-subunit of the archaeal translation initiation factor 2 To be Published
|
|
3QSY
| Recognition of the methionylated initiator tRNA by the translation initiation factor 2 in Archaea | Descriptor: | METHIONINE, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, Translation initiation factor 2 subunit alpha, ... | Authors: | Nikonov, O.S, Stolboushkina, E.A, Zelinskaya, N.V, Nikulin, A.D, Garber, M.B, Nikonov, S.V. | Deposit date: | 2011-02-22 | Release date: | 2012-03-21 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (3.2 Å) | Cite: | Crystal structure of the archaeal translation initiation factor 2 in complex with a GTP analogue and Met-tRNAf(Met.) J.Mol.Biol., 425, 2013
|
|
5D5S
| Crystal structure of methionine gamma-lyase from Citrobacter freundii, S339A mutant | Descriptor: | DI(HYDROXYETHYL)ETHER, Methionine gamma-lyase, PYRIDOXAL-5'-PHOSPHATE, ... | Authors: | Revtovich, S.V, Nikulin, A.D, Anufrieva, N.V, Morozova, E.A, Demidkina, T.V. | Deposit date: | 2015-08-11 | Release date: | 2016-08-17 | Last modified: | 2024-01-10 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | The crystal structure of methionine gamma-lyase from Citrobacter freundii, S339A mutant To Be Published
|
|
5DSZ
| Gamma-subunit of the translation initiation factor 2 from S. solfataricus | Descriptor: | Translation initiation factor 2 subunit gamma | Authors: | Kravchenko, O.V, Nikonov, O.S, Stolboushkina, E.A, Nevskaya, N.A, Nikulin, A.D, Garber, M.B, Nikonov, S.V. | Deposit date: | 2015-09-17 | Release date: | 2016-08-24 | Last modified: | 2024-01-10 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | Gamma-subunit of the translation initiation factor 2 from S. solfataricus To Be Published
|
|
5E4Z
| Crystal structure of methionine gamma-lyase from Citrobacter freundii with C115A substitution | Descriptor: | DI(HYDROXYETHYL)ETHER, Methionine gamma-lyase, PENTAETHYLENE GLYCOL, ... | Authors: | Revtovich, S.V, Nikulin, A.D, Anufrieva, N.V, Morozova, E.A, Demidkina, T.V. | Deposit date: | 2015-10-07 | Release date: | 2016-10-12 | Last modified: | 2024-01-10 | Method: | X-RAY DIFFRACTION (2.27 Å) | Cite: | Crystal structure of C115A mutant L-methionine gamma-lyase from Citrobacter freundii To Be Published
|
|
2PMD
| The structures of aIF2gamma subunit from the archaeon Sulfolobus solfataricus in the GDP-bound form. | Descriptor: | GUANOSINE-5'-DIPHOSPHATE, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, PYROPHOSPHATE, ... | Authors: | Nikonov, O.S, Stolboushkina, E.A, Nikulin, A.D, Hasenohrl, D, Blaesi, U, Manstein, D.J, Fedorov, R.V, Garber, M.B, Nikonov, S.V. | Deposit date: | 2007-04-21 | Release date: | 2007-11-06 | Last modified: | 2023-08-30 | Method: | X-RAY DIFFRACTION (2.65 Å) | Cite: | New Insights into the Interactions of the Translation Initiation Factor 2 from Archaea with Guanine Nucleotides and Initiator tRNA. J.Mol.Biol., 373, 2007
|
|
2PLF
| The structure of aIF2gamma subunit from the archaeon Sulfolobus solfataricus in the nucleotide-free form. | Descriptor: | Translation initiation factor 2 gamma subunit | Authors: | Nikonov, O.S, Stolboushkina, E.A, Nikulin, A.D, Hasenohrl, D, Blaesi, U, Manstein, D.J, Fedorov, R.V, Garber, M.B, Nikonov, S.V. | Deposit date: | 2007-04-19 | Release date: | 2007-11-06 | Last modified: | 2023-08-30 | Method: | X-RAY DIFFRACTION (2.9 Å) | Cite: | New Insights into the Interactions of the Translation Initiation Factor 2 from Archaea with Guanine Nucleotides and Initiator tRNA. J.Mol.Biol., 373, 2007
|
|
4QFM
| The structure of aIF2gamma subunit D152A from archaeon Sulfolobus solfataricus complexed with GDPCP | Descriptor: | FORMIC ACID, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, ... | Authors: | Kravchenko, O.V, Nikonov, O.S, Arhipova, V.I, Stolboushkina, E.A, Gabdulkhakov, A.G, Nikulin, A.D, Garber, M.B, Nikonov, S.V. | Deposit date: | 2014-05-21 | Release date: | 2015-06-03 | Last modified: | 2023-09-20 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | The structure of aIF2gamma subunit D152A from archaeon Sulfolobus solfataricus complexed with GDPCP To be Published
|
|
4QHY
| The structure of aIF2gamma subunit H20F/D152A from archaeon Sulfolobus solfataricus complexed with GDPCP | Descriptor: | MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, Translation initiation factor 2 subunit gamma | Authors: | Kravchenko, O.V, Nikonov, O.S, Arhipova, V.I, Stolboushkina, E.A, Gabdulkhakov, A.G, Nikulin, A.D, Garber, M.B, Nikonov, S.V. | Deposit date: | 2014-05-30 | Release date: | 2015-06-03 | Last modified: | 2023-09-20 | Method: | X-RAY DIFFRACTION (3.29 Å) | Cite: | Binding mRNA on the archaeal translation initiation factor 2 gamma-subunit To be Published
|
|
4RJL
| Gamma subunit of the translation initiation factor 2 from Sulfolobus solfataricus complexed with GDPCP | Descriptor: | 2,5,8,11,14,17,20,23-OCTAOXAPENTACOSAN-25-OL, FORMIC ACID, MAGNESIUM ION, ... | Authors: | Kravchenko, O.V, Nikonov, O.S, Arhipova, V.I, Stolboushkina, E.A, Gabdulkhakov, A.G, Nikulin, A.D, Garber, M.B, Nikonov, S.V. | Deposit date: | 2014-10-09 | Release date: | 2015-11-11 | Last modified: | 2023-09-20 | Method: | X-RAY DIFFRACTION (1.6401 Å) | Cite: | Crystal structure of gamma subunit of the translation initiation factor 2 from Sulfolobus solfataricus in complex with GDPCP at 1.64A resolution To be Published
|
|
4MKJ
| Crystal structure of L-methionine gamma-lyase from Citrobacter freundii modified by allicine | Descriptor: | Methionine gamma-lyase, PENTAETHYLENE GLYCOL, SODIUM ION, ... | Authors: | Revtovich, S.V, Nikulin, A.D, Morozova, E.A, Zakomirdina, L.N, Demidkina, T.V. | Deposit date: | 2013-09-05 | Release date: | 2014-11-12 | Last modified: | 2023-12-06 | Method: | X-RAY DIFFRACTION (1.849 Å) | Cite: | Alliin is a suicide substrate of Citrobacter freundii methionine gamma-lyase: structural bases of inactivation of the enzyme. Acta Crystallogr.,Sect.D, 70, 2014
|
|
4MML
| D40A Hfq from Pseudomonas aeruginosa | Descriptor: | MAGNESIUM ION, Protein hfq, SULFATE ION, ... | Authors: | Murina, V.N, Filimonov, V.V, Melnik, B.S, Uhlein, M, Mueller, U, Weiss, M, Nikulin, A.D. | Deposit date: | 2013-09-09 | Release date: | 2014-07-09 | Last modified: | 2023-09-20 | Method: | X-RAY DIFFRACTION (1.801 Å) | Cite: | Effect of conserved intersubunit amino Acid substitutions on hfq protein structure and stability. Biochemistry Mosc., 79, 2014
|
|
4MKK
| Crystal structure of C115A mutant L-methionine gamma-lyase from Citrobacter freundii modified by allicine | Descriptor: | CHLORIDE ION, Methionine gamma-lyase, POTASSIUM ION, ... | Authors: | Revtovich, S.V, Nikulin, A.D, Morozova, E.A, Zakomirdina, L.N, Demidkina, T.V. | Deposit date: | 2013-09-05 | Release date: | 2014-11-12 | Last modified: | 2023-12-06 | Method: | X-RAY DIFFRACTION (1.45 Å) | Cite: | Alliin is a suicide substrate of Citrobacter freundii methionine gamma-lyase: structural bases of inactivation of the enzyme. Acta Crystallogr.,Sect.D, 70, 2014
|
|
4OMA
| The crystal structure of methionine gamma-lyase from Citrobacter freundii in complex with L-cycloserine pyridoxal-5'-phosphate | Descriptor: | CHLORIDE ION, DI(HYDROXYETHYL)ETHER, TRIETHYLENE GLYCOL, ... | Authors: | Revtovich, S.V, Nikulin, A.D, Morozova, E.A, Demidkina, T.V. | Deposit date: | 2014-01-27 | Release date: | 2014-11-26 | Last modified: | 2023-09-20 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | Pre-steady-state Kinetic and Structural Analysis of Interaction of Methionine gamma-Lyase from Citrobacter freundii with Inhibitors. J.Biol.Chem., 290, 2015
|
|
4NBS
| The structure of aIF2gamma subunit H20F from archaeon Sulfolobus solfataricus complexed with GDPCP | Descriptor: | FORMIC ACID, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, ... | Authors: | Kravchenko, O.V, Nikonov, O.S, Arhipova, V.I, Stolboushkina, E.A, Gabdulkhakov, A.G, Nikulin, A.D, Garber, M.B, Nikonov, S.V. | Deposit date: | 2013-10-23 | Release date: | 2014-10-29 | Last modified: | 2023-09-20 | Method: | X-RAY DIFFRACTION (2.305 Å) | Cite: | The structure of aIF2gamma subunit H20F from archaeon Sulfolobus solfataricus complexed with GDPCP To be Published
|
|
4MMK
| Q8A Hfq from Pseudomonas aeruginosa | Descriptor: | POTASSIUM ION, Protein hfq, SODIUM ION, ... | Authors: | Murina, V.N, Filimonov, V.V, Melnik, B.S, Uhlein, M, Mueller, U, Weiss, M, Nikulin, A.D. | Deposit date: | 2013-09-09 | Release date: | 2014-07-09 | Last modified: | 2023-09-20 | Method: | X-RAY DIFFRACTION (2.156 Å) | Cite: | Effect of conserved intersubunit amino Acid substitutions on hfq protein structure and stability. Biochemistry Mosc., 79, 2014
|
|
5DX5
| Crystal structure of methionine gamma-lyase from Clostridium sporogenes | Descriptor: | CHLORIDE ION, Methionine gamma-lyase, PYRIDOXAL-5'-PHOSPHATE, ... | Authors: | Revtovich, S.V, Nikulin, A.D, Morozova, E.A, Anufrieva, N.V, Demidkina, T.V. | Deposit date: | 2015-09-23 | Release date: | 2016-01-13 | Last modified: | 2024-01-10 | Method: | X-RAY DIFFRACTION (2.37 Å) | Cite: | Structure of methionine gamma-lyase from Clostridium sporogenes. Acta Crystallogr.,Sect.F, 72, 2016
|
|
4P7Y
| L-methionine gamma-lyase from Citrobacter freundii with Y58F substitution | Descriptor: | DI(HYDROXYETHYL)ETHER, METHIONINE GAMMA-LYASE, PENTAETHYLENE GLYCOL | Authors: | Revtovich, S.V, Nikulin, A.D, Anufrieva, N.V, Morozova, E.A, Demidkina, T.V. | Deposit date: | 2014-03-28 | Release date: | 2014-11-12 | Last modified: | 2023-11-15 | Method: | X-RAY DIFFRACTION (1.96 Å) | Cite: | Crystal structure of L-methionine gamma-lyase from Citrobacter freundii with Y58F substitution To Be Published
|
|
3THK
| Structure of SH3 chimera with a type II ligand linked to the chain C-terminal | Descriptor: | BETA-MERCAPTOETHANOL, Proline-rich peptide, SULFATE ION, ... | Authors: | Gabdulkhakov, A.G, Gushchina, L.V, Nikulin, A.D, Nikonov, S.V, Filimonov, V.V. | Deposit date: | 2011-08-19 | Release date: | 2011-11-23 | Last modified: | 2023-09-13 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | High-Resolution Crystal Structure of Spectrin SH3 Domain Fused with a Proline-Rich Peptide. J.Biomol.Struct.Dyn., 29, 2011
|
|
2OAW
| Structure of SHH variant of "Bergerac" chimera of spectrin SH3 | Descriptor: | CHLORIDE ION, Spectrin alpha chain, brain | Authors: | Gabdoulkhakov, A.G, Gushchina, L.V, Nikulin, A.D, Nikonov, S.V, Viguera, A.R, Serrano, L, Filimonov, V.V. | Deposit date: | 2006-12-18 | Release date: | 2008-04-08 | Last modified: | 2023-08-30 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Structural and thermodynamic studies of Bergerac-SH3 chimeras. Biophys.Chem., 139, 2009
|
|