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PDB: 107 results

2GH6
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Crystal structure of a HDAC-like protein with 9,9,9-trifluoro-8-oxo-N-phenylnonan amide bound
Descriptor: 9,9,9-TRIFLUORO-8-OXO-N-PHENYLNONANAMIDE, Histone deacetylase-like amidohydrolase, POTASSIUM ION, ...
Authors:Nielsen, T.K, Hildmann, C, Riester, D, Wegener, D, Schwienhorst, A, Ficner, R.
Deposit date:2006-03-26
Release date:2007-03-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.203 Å)
Cite:Complex structure of a bacterial class 2 histone deacetylase homologue with a trifluoromethylketone inhibitor.
Acta Crystallogr.,Sect.F, 63, 2007
7Q6I
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Vibrio maritimus FtsA 1-396 ATP and FtsN 1-29, bent tetramers in double filament arrangement
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Cell division protein FtsA, Cell division protein FtsN (polyAla model), ...
Authors:Nierhaus, T, Kureisaite-Ciziene, D, Lowe, J.
Deposit date:2021-11-07
Release date:2022-09-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Bacterial divisome protein FtsA forms curved antiparallel double filaments when binding to FtsN.
Nat Microbiol, 7, 2022
8OVL
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BU of 8ovl by Molmil
NMR solution structure of the heavy metal binding domain of P1B-ATPase LpCopA.
Descriptor: Copper-translocating P-type ATPase
Authors:Nielsen, T.J.
Deposit date:2023-04-26
Release date:2023-05-31
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:NMR solution structure of the heavy metal binding domain of P1B-ATPase LpCopA.
To Be Published
4OHS
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BU of 4ohs by Molmil
The structure of a far-red fluorescent protein, AQ143
Descriptor: CHLORIDE ION, FAR-RED FLUORESCENT PROTEIN AQ143
Authors:Wannier, T.M, Mayo, S.L.
Deposit date:2014-01-17
Release date:2014-02-26
Last modified:2014-08-06
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:The structure of a far-red fluorescent protein, AQ143, shows evidence in support of reported red-shifting chromophore interactions.
Protein Sci., 23, 2014
7Q6D
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BU of 7q6d by Molmil
E. coli FtsA 1-405 ATP 3 Ni
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Cell division protein FtsA, MAGNESIUM ION, ...
Authors:Nierhaus, T, Kureisaite-Ciziene, D, Lowe, J.
Deposit date:2021-11-06
Release date:2022-09-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Bacterial divisome protein FtsA forms curved antiparallel double filaments when binding to FtsN.
Nat Microbiol, 7, 2022
7Q6G
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Xenorhabdus poinarii FtsA 1-396 ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Cell division protein FtsA, MAGNESIUM ION
Authors:Nierhaus, T, Kureisaite-Ciziene, D, Lowe, J.
Deposit date:2021-11-07
Release date:2022-09-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Bacterial divisome protein FtsA forms curved antiparallel double filaments when binding to FtsN.
Nat Microbiol, 7, 2022
7Q6F
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BU of 7q6f by Molmil
Vibrio maritimus FtsA 1-396 ATP, double filament
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Cell division protein FtsA, MAGNESIUM ION
Authors:Nierhaus, T, Kureisaite-Ciziene, D, Lowe, J.
Deposit date:2021-11-07
Release date:2022-09-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.31 Å)
Cite:Bacterial divisome protein FtsA forms curved antiparallel double filaments when binding to FtsN.
Nat Microbiol, 7, 2022
2V6C
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BU of 2v6c by Molmil
Crystal structure of ErbB3 binding protein 1 (Ebp1)
Descriptor: PROLIFERATION-ASSOCIATED PROTEIN 2G4
Authors:Monie, T.P, Perrin, A.J, Birtley, J.R, Curry, S.
Deposit date:2007-07-16
Release date:2007-08-21
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Insights Into the Transcriptional and Translational Roles of Ebp1
Embo J., 26, 2007
1IES
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BU of 1ies by Molmil
TETRAGONAL CRYSTAL STRUCTURE OF NATIVE HORSE SPLEEN FERRITIN
Descriptor: CADMIUM ION, FERRITIN
Authors:Granier, T, Gallois, B, Dautant, A, Langlois D'Estaintot, B, Precigoux, G.
Deposit date:1996-05-28
Release date:1997-01-11
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Comparison of the structures of the cubic and tetragonal forms of horse-spleen apoferritin.
Acta Crystallogr.,Sect.D, 53, 1997
6DEJ
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BU of 6dej by Molmil
The structure of HcRed7, a brighter and red-shifted HcRed variant
Descriptor: CHLORIDE ION, DODECAETHYLENE GLYCOL, GFP-like non-fluorescent chromoprotein, ...
Authors:Wannier, T.M, Mayo, S.L.
Deposit date:2018-05-12
Release date:2018-05-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.6279 Å)
Cite:Monomerization of far-red fluorescent proteins.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
1ZZ0
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BU of 1zz0 by Molmil
Crystal structure of a HDAC-like protein with acetate bound
Descriptor: ACETATE ION, Histone deacetylase-like amidohydrolase, POTASSIUM ION, ...
Authors:Nielsen, T.K, Hildmann, C, Dickmanns, A, Schwienhorst, A, Ficner, R.
Deposit date:2005-06-13
Release date:2005-11-29
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of a bacterial class 2 histone deacetylase homologue
J.Mol.Biol., 354, 2005
1ZZ3
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BU of 1zz3 by Molmil
Crystal structure of a HDAC-like protein with CypX bound
Descriptor: 3-CYCLOPENTYL-N-HYDROXYPROPANAMIDE, Histone deacetylase-like amidohydrolase, POTASSIUM ION, ...
Authors:Nielsen, T.K, Hildmann, C, Dickmanns, A, Schwienhorst, A, Ficner, R.
Deposit date:2005-06-13
Release date:2005-11-29
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Crystal structure of a bacterial class 2 histone deacetylase homologue
J.Mol.Biol., 354, 2005
1ZZ1
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BU of 1zz1 by Molmil
Crystal structure of a HDAC-like protein with SAHA bound
Descriptor: Histone deacetylase-like amidohydrolase, OCTANEDIOIC ACID HYDROXYAMIDE PHENYLAMIDE, POTASSIUM ION, ...
Authors:Nielsen, T.K, Hildmann, C, Dickmanns, A, Schwienhorst, A, Ficner, R.
Deposit date:2005-06-13
Release date:2005-11-29
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Crystal structure of a bacterial class 2 histone deacetylase homologue
J.Mol.Biol., 354, 2005
3KXU
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BU of 3kxu by Molmil
Crystal structure of human ferritin FTL498InsTC pathogenic mutant
Descriptor: CADMIUM ION, Ferritin, SULFATE ION
Authors:Granier, T, Gallois, B, Langlois d'Estaintot, B, Arosio, P.
Deposit date:2009-12-04
Release date:2010-02-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Mutant ferritin L-chains that cause neurodegeneration act in a dominant-negative manner to reduce ferritin iron incorporation.
J.Biol.Chem., 285, 2010
1G8Y
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BU of 1g8y by Molmil
CRYSTAL STRUCTURE OF THE HEXAMERIC REPLICATIVE HELICASE REPA OF PLASMID RSF1010
Descriptor: REGULATORY PROTEIN REPA
Authors:Niedenzu, T, Roeleke, D, Bains, G, Scherzinger, E, Saenger, W.
Deposit date:2000-11-21
Release date:2001-02-14
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the hexameric replicative helicase RepA of plasmid RSF1010.
J.Mol.Biol., 306, 2001
2H0K
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BU of 2h0k by Molmil
Crystal Structure of a Mutant of Rat Annexin A5
Descriptor: Annexin A5, CALCIUM ION
Authors:Granier, T, Langlois D'Estaintot, B, Gallois, B, Tessier, B, Brisson, A.
Deposit date:2006-05-15
Release date:2007-06-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.76 Å)
Cite:Annexin-A5 assembled into two-dimensional arrays promotes cell membrane repair.
Nat Commun, 2, 2011
1IER
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BU of 1ier by Molmil
CUBIC CRYSTAL STRUCTURE OF NATIVE HORSE SPLEEN FERRITIN
Descriptor: CADMIUM ION, FERRITIN
Authors:Granier, T, Gallois, B, Dautant, A, Langlois D'Estaintot, B, Precigoux, G.
Deposit date:1996-05-28
Release date:1997-01-11
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Comparison of the structures of the cubic and tetragonal forms of horse-spleen apoferritin.
Acta Crystallogr.,Sect.D, 53, 1997
3M8V
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BU of 3m8v by Molmil
Crystal structure of the BTB domain from Kaiso/ZBTB33, form II
Descriptor: Transcriptional regulator Kaiso
Authors:Nielsen, T.K, Stogios, P.J, Prive, G.G.
Deposit date:2010-03-19
Release date:2011-03-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of the BTB domain from Kaiso/ZBTB33, form II
TO BE PUBLISHED
1LB3
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BU of 1lb3 by Molmil
Structure of recombinant mouse L chain ferritin at 1.2 A resolution
Descriptor: CADMIUM ION, FERRITIN LIGHT CHAIN 1, GLYCEROL, ...
Authors:Granier, T, Langlois D'Estaintot, B, Gallois, B, Chevalier, J.-M, Precigoux, G, Santambrogio, P, Arosio, P.
Deposit date:2002-04-02
Release date:2003-01-28
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.21 Å)
Cite:Structural description of the active sites of mouse L-chain ferritin at 1.2A resolution
J.Biol.Inorg.Chem., 8, 2003
1OLO
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BU of 1olo by Molmil
Hexameric Replicative DNA Helicase RepA from Plasmid RSF1010 - Cubic Crystal Structure
Descriptor: REGULATORY PROTEIN REPA, SULFATE ION
Authors:Niedenzu, T, Saenger, W.
Deposit date:2003-08-08
Release date:2003-09-19
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Hexameric Rsf1010 Helicase Repa: The Structural and Functional Importance of Single Amino Acid Residues
Nucleic Acids Res., 31, 2003
1H96
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BU of 1h96 by Molmil
recombinant mouse L-chain ferritin
Descriptor: CADMIUM ION, FERRITIN LIGHT CHAIN 1, SULFATE ION
Authors:Granier, T, Gallois, B, D'Estaintot, B.L, Dautant, A, Chevalier, J.M, Mellado, J.M, Beaumont, C, Santambrogio, P, Arosio, P, Precigoux, G.
Deposit date:2001-02-28
Release date:2001-03-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of Mouse L-Chain Ferritin at 1.6 A Resolution
Acta Crystallogr.,Sect.D, 57, 2001
1SYX
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BU of 1syx by Molmil
The crystal structure of a binary U5 snRNP complex
Descriptor: CD2 antigen cytoplasmic tail-binding protein 2, Spliceosomal U5 snRNP-specific 15 kDa protein
Authors:Nielsen, T.K, Liu, S, Luhrmann, R, Ficner, R.
Deposit date:2004-04-02
Release date:2005-10-18
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.345 Å)
Cite:Structural basis for the bifunctionality of the U5 snRNP 52K protein (CD2BP2).
J.Mol.Biol., 369, 2007
8HTV
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BU of 8htv by Molmil
SARS-CoV-2 3CL protease (3CLpro) in complex with compound 3a
Descriptor: 1-(5,6-dihydrobenzo[b][1]benzazepin-11-yl)-2-sulfanyl-ethanone, 3C-like proteinase
Authors:Su, H.X, Nie, T.Q, Li, M.J, Xu, Y.C.
Deposit date:2022-12-21
Release date:2023-08-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Discovery and Mechanism Study of SARS-CoV-2 3C-like Protease Inhibitors with a New Reactive Group.
J.Med.Chem., 66, 2023
8IFQ
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SARS-CoV-2 3CL protease (3CLpro) in complex with compound 2
Descriptor: (1R,2S,5S)-3-[N-(tert-butylcarbamoyl)-3-methyl-L-valyl]-N-{(1Z,2S)-1-imino-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-6,6-dimethyl-3-azabicyclo[3.1.0]hexane-2-carboxamide, 3C-like proteinase nsp5
Authors:Su, H.X, Zhao, W.F, Xie, H, Nie, T.Q, Li, M.J, Xu, Y.C.
Deposit date:2023-02-19
Release date:2023-10-18
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Structure-based development and preclinical evaluation of the SARS-CoV-2 3C-like protease inhibitor simnotrelvir.
Nat Commun, 14, 2023
8IFS
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BU of 8ifs by Molmil
SARS-CoV-2 3CL protease (3CLpro) in complex with compound 7
Descriptor: (8~{S})-7-[(2~{S})-2-(~{tert}-butylcarbamoylamino)-3,3-dimethyl-butanoyl]-~{N}-[(1~{S})-1-cyano-2-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]ethyl]-1,4-dithia-7-azaspiro[4.4]nonane-8-carboxamide, 3C-like proteinase nsp5
Authors:Su, H.X, Zhao, W.F, Xie, H, Nie, T.Q, Li, M.J, Xu, Y.C.
Deposit date:2023-02-19
Release date:2023-10-18
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Structure-based development and preclinical evaluation of the SARS-CoV-2 3C-like protease inhibitor simnotrelvir.
Nat Commun, 14, 2023

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