Loading
PDBj
English日本語简体中文繁體中文한국어
✖
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 171 results
8IH0
DownloadVisualize
BU of 8ih0 by Molmil
Crystal structure of GH11 from Thermoanaerobacterium saccharolyticum
Descriptor: ACETATE ION, Endo-1,4-beta-xylanase
Authors:Nam, K.H.
Deposit date:2023-02-22
Release date:2023-11-22
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Characterization and structural analysis of the endo-1,4-beta-xylanase GH11 from the hemicellulose-degrading Thermoanaerobacterium saccharolyticum useful for lignocellulose saccharification.
Sci Rep, 13, 2023
8IH1
DownloadVisualize
BU of 8ih1 by Molmil
Room temperature structure of GH11 from Thermoanaerobacterium saccharolyticum by serial crystallography
Descriptor: ACETATE ION, Endo-1,4-beta-xylanase
Authors:Nam, K.H.
Deposit date:2023-02-22
Release date:2023-11-22
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Characterization and structural analysis of the endo-1,4-beta-xylanase GH11 from the hemicellulose-degrading Thermoanaerobacterium saccharolyticum useful for lignocellulose saccharification.
Sci Rep, 13, 2023
6LOF
DownloadVisualize
BU of 6lof by Molmil
Crystal structure of ZsYellow soaked by Cu2+
Descriptor: GFP-like fluorescent chromoprotein FP538
Authors:Nam, K.H.
Deposit date:2020-01-05
Release date:2020-01-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Spectroscopic and Structural Analysis of Cu 2+ -Induced Fluorescence Quenching of ZsYellow.
Biosensors (Basel), 10, 2020
6LZO
DownloadVisualize
BU of 6lzo by Molmil
Thermolysin with 1,10-phenanthroline
Descriptor: 1,10-PHENANTHROLINE, CALCIUM ION, Thermolysin
Authors:Nam, K.H.
Deposit date:2020-02-19
Release date:2021-01-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural analysis of metal chelation of the metalloproteinase thermolysin by 1,10-phenanthroline.
J.Inorg.Biochem., 215, 2021
6LZN
DownloadVisualize
BU of 6lzn by Molmil
Thermolysin
Descriptor: CALCIUM ION, GLYCEROL, ISOLEUCINE, ...
Authors:Nam, K.H.
Deposit date:2020-02-19
Release date:2021-01-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural analysis of metal chelation of the metalloproteinase thermolysin by 1,10-phenanthroline.
J.Inorg.Biochem., 215, 2021
6LL2
DownloadVisualize
BU of 6ll2 by Molmil
Crystal structure of glucose isomerase by fixed-target serial femtosecond crystallography
Descriptor: MAGNESIUM ION, Xylose isomerase
Authors:Nam, K.H.
Deposit date:2019-12-21
Release date:2020-06-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of glucose isomerase by fixed-target serial femtosecond crystallography
To Be Published
7DFJ
DownloadVisualize
BU of 7dfj by Molmil
Crystal structure of glucose isomerase by serial millisecond crystallography
Descriptor: MAGNESIUM ION, Xylose isomerase
Authors:Nam, K.H.
Deposit date:2020-11-08
Release date:2021-11-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of glucose isomerase by serial millisecond crystallography
To Be Published
7DFK
DownloadVisualize
BU of 7dfk by Molmil
Crystal structure of xylitol-bound glucose isomerase by serial millisecond crystallography
Descriptor: MAGNESIUM ION, Xylitol, Xylose isomerase
Authors:Nam, K.H.
Deposit date:2020-11-08
Release date:2021-11-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of xylitol-bound glucose isomerase by serial millisecond crystallography
To Be Published
7DIG
DownloadVisualize
BU of 7dig by Molmil
Green fluorescent protein from Dendronephthya sp. SSAL-2002
Descriptor: Green fluorescent protein
Authors:Nam, K.H.
Deposit date:2020-11-19
Release date:2021-12-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Metal-Induced Fluorescence Quenching of Photoconvertible Fluorescent Protein DendFP.
Molecules, 27, 2022
8WXO
DownloadVisualize
BU of 8wxo by Molmil
Crystal structure of substrate-binding protein from Rhodothermus marinus (Dose III)
Descriptor: ABC-type uncharacterized transport system periplasmic component-like protein
Authors:Nam, K.H.
Deposit date:2023-10-30
Release date:2023-11-22
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Data of radiation damage on selenomethionine-substituted single-domain substrate-binding protein.
Data Brief, 53, 2024
8WXM
DownloadVisualize
BU of 8wxm by Molmil
Crystal structure of substrate-binding protein from Rhodothermus marinus (Dose I)
Descriptor: ABC-type uncharacterized transport system periplasmic component-like protein
Authors:Nam, K.H.
Deposit date:2023-10-30
Release date:2023-11-22
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Data of radiation damage on selenomethionine-substituted single-domain substrate-binding protein.
Data Brief, 53, 2024
8WXN
DownloadVisualize
BU of 8wxn by Molmil
Crystal structure of substrate-binding protein from Rhodothermus marinus (Dose II)
Descriptor: ABC-type uncharacterized transport system periplasmic component-like protein
Authors:Nam, K.H.
Deposit date:2023-10-30
Release date:2023-11-22
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Data of radiation damage on selenomethionine-substituted single-domain substrate-binding protein.
Data Brief, 53, 2024
8WXP
DownloadVisualize
BU of 8wxp by Molmil
Crystal structure of substrate-binding protein from Rhodothermus marinus (Dose IV)
Descriptor: ABC-type uncharacterized transport system periplasmic component-like protein
Authors:Nam, K.H.
Deposit date:2023-10-30
Release date:2023-11-22
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Data of radiation damage on selenomethionine-substituted single-domain substrate-binding protein.
Data Brief, 53, 2024
8X1D
DownloadVisualize
BU of 8x1d by Molmil
Crystal structure of GH11 from Thermoanaerobacterium saccharolyticum (pH8.5)
Descriptor: ACETATE ION, Endo-1,4-beta-xylanase
Authors:Nam, K.H.
Deposit date:2023-11-07
Release date:2023-11-22
Last modified:2024-07-17
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:pH-Induced structural changes in xylanase GH11 from Thermoanaerobacterium saccharolyticum
F1000Res, 2024
8YBH
DownloadVisualize
BU of 8ybh by Molmil
Crystal structure of lysozyme by macromolecular crystallography
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION
Authors:Nam, K.H.
Deposit date:2024-02-14
Release date:2024-02-28
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structure of lysozyme by macromolecular crystallography
To Be Published
8YDO
DownloadVisualize
BU of 8ydo by Molmil
Crystal structure of dKeima570
Descriptor: Large stokes shift fluorescent protein
Authors:Nam, K.H.
Deposit date:2024-02-21
Release date:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of dKeima570
To Be Published
8YJI
DownloadVisualize
BU of 8yji by Molmil
Room temperature structure of xylanase from Trichoderma longibrachiatum
Descriptor: Endo-1,4-beta-xylanase
Authors:Nam, K.H.
Deposit date:2024-03-02
Release date:2024-03-13
Last modified:2024-06-26
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Temperature-dependent structural changes in xylanase II from Trichoderma longibrachiatum.
Carbohydr.Res., 541, 2024
8YJJ
DownloadVisualize
BU of 8yjj by Molmil
Crystal structure of xylanase from Trichoderma longibrachiatum
Descriptor: Endo-1,4-beta-xylanase
Authors:Nam, K.H.
Deposit date:2024-03-02
Release date:2024-03-13
Last modified:2024-06-26
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Temperature-dependent structural changes in xylanase II from Trichoderma longibrachiatum.
Carbohydr.Res., 541, 2024
8XC6
DownloadVisualize
BU of 8xc6 by Molmil
Crystal structure of large stokes shift red fluorescent protein tKeima
Descriptor: fluorescent protein
Authors:Nam, K.H.
Deposit date:2023-12-08
Release date:2024-04-17
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural Analysis of the Large Stokes Shift Red Fluorescent Protein tKeima.
Molecules, 29, 2024
8WGP
DownloadVisualize
BU of 8wgp by Molmil
Crystal structure of DsRed-Monomer
Descriptor: Red fluorescent protein
Authors:Nam, K.H.
Deposit date:2023-09-22
Release date:2024-02-21
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural Flexibility of the Monomeric Red Fluorescent Protein DsRed.
Crystals, 14, 2024
8YYN
DownloadVisualize
BU of 8yyn by Molmil
Crystal structure of TsaGH11 complexed with beta-D-xylopyranose (Data I)
Descriptor: ACETATE ION, Endo-1,4-beta-xylanase, beta-D-xylopyranose
Authors:Nam, K.H.
Deposit date:2024-04-04
Release date:2024-04-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of TsaGH11 complexed with beta-D-xylopyranose (Data I)
To Be Published
8XPE
DownloadVisualize
BU of 8xpe by Molmil
Crystal structure of Tris-bound TsaBgl (DATA III)
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, SODIUM ION, beta-glucosidase
Authors:Nam, K.H.
Deposit date:2024-01-03
Release date:2024-01-31
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural analysis of Tris binding in beta-glucosidases.
Biochem.Biophys.Res.Commun., 700, 2024
8XPC
DownloadVisualize
BU of 8xpc by Molmil
Crystal structure of Tris-bound TsaBgl (DATA I)
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, SODIUM ION, beta-glucosidase
Authors:Nam, K.H.
Deposit date:2024-01-03
Release date:2024-01-31
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural analysis of Tris binding in beta-glucosidases.
Biochem.Biophys.Res.Commun., 700, 2024
8ZM5
DownloadVisualize
BU of 8zm5 by Molmil
Crystal structure of Thermolysin (Dose II)
Descriptor: CALCIUM ION, ISOLEUCINE, LYSINE, ...
Authors:Nam, K.H.
Deposit date:2024-05-22
Release date:2024-06-05
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of Thermolysin (Dose II)
To Be Published
8XPD
DownloadVisualize
BU of 8xpd by Molmil
Crystal structure of Tris-bound TsaBgl (DATA II)
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, SODIUM ION, beta-glucosidase
Authors:Nam, K.H.
Deposit date:2024-01-03
Release date:2024-01-31
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural analysis of Tris binding in beta-glucosidases.
Biochem.Biophys.Res.Commun., 700, 2024

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon