6KN7
| Structure of human cardiac thin filament in the calcium free state | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ... | Authors: | Fujii, T, Yamada, Y, Namba, K. | Deposit date: | 2019-08-03 | Release date: | 2020-01-15 | Last modified: | 2024-03-27 | Method: | ELECTRON MICROSCOPY (6.6 Å) | Cite: | Cardiac muscle thin filament structures reveal calcium regulatory mechanism. Nat Commun, 11, 2020
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3VJP
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2DPY
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3TEE
| Crystal Structure of Salmonella FlgA in open form | Descriptor: | CHLORIDE ION, Flagella basal body P-ring formation protein flgA, GLYCEROL | Authors: | Matsunami, H, Samatey, F.A, Namba, K. | Deposit date: | 2011-08-12 | Release date: | 2012-08-15 | Last modified: | 2016-07-06 | Method: | X-RAY DIFFRACTION (1.95 Å) | Cite: | Structural flexibility of the periplasmic protein, FlgA, regulates flagellar P-ring assembly in Salmonella enterica Sci Rep, 6, 2016
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3VKI
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2D4Y
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2D4X
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3AJW
| Structure of FliJ, a soluble component of flagellar type III export apparatus | Descriptor: | Flagellar fliJ protein, MERCURY (II) ION | Authors: | Imada, K, Ibuki, T, Minamino, T, Namba, K. | Deposit date: | 2010-06-23 | Release date: | 2011-02-02 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Common architecture of the flagellar type III protein export apparatus and F- and V-type ATPases Nat.Struct.Mol.Biol., 18, 2011
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3A7M
| Structure of FliT, the flagellar type III chaperone for FliD | Descriptor: | Flagellar protein fliT | Authors: | Imada, K, Minamino, T, Kinoshita, M, Namba, K. | Deposit date: | 2009-09-29 | Release date: | 2010-04-28 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (3.2 Å) | Cite: | Structural insight into the regulatory mechanisms of interactions of the flagellar type III chaperone FliT with its binding partners. Proc.Natl.Acad.Sci.USA, 107, 2010
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4A6J
| Structural model of ParM filament based on CryoEM map | Descriptor: | MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, PLASMID SEGREGATION PROTEIN PARM | Authors: | Gayathri, P, Fujii, T, Moller-Jensen, J, Van Den Ent, F, Namba, K, Lowe, J. | Deposit date: | 2011-11-04 | Release date: | 2012-11-21 | Last modified: | 2024-05-08 | Method: | ELECTRON MICROSCOPY (7.2 Å) | Cite: | A Bipolar Spindle of Antiparallel Parm Filaments Drives Bacterial Plasmid Segregation. Science, 338, 2012
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4D3E
| Tetramer of IpaD, modified from 2J0O, fitted into negative stain electron microscopy reconstruction of the wild type tip complex from the type III secretion system of Shigella flexneri | Descriptor: | INVASIN IPAD | Authors: | Cheung, M, Shen, D.-K, Makino, F, Kato, T, Roehrich, D, Martinez-Argudo, I, Walker, M.L, Murillo, I, Liu, X, Pain, M, Brown, J, Frazer, G, Mantell, J, Mina, P, Todd, T, Sessions, R.B, Namba, K, Blocker, A.J. | Deposit date: | 2014-10-21 | Release date: | 2014-12-10 | Last modified: | 2024-05-08 | Method: | ELECTRON MICROSCOPY (24 Å) | Cite: | Three-Dimensional Electron Microscopy Reconstruction and Cysteine-Mediated Crosslinking Provide a Model of the T3Ss Needle Tip Complex. Mol.Microbiol., 95, 2015
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3RI6
| A Novel Mechanism of Sulfur Transfer Catalyzed by O-Acetylhomoserine Sulfhydrylase in Methionine Biosynthetic Pathway of Wolinella succinogenes | Descriptor: | O-ACETYLHOMOSERINE SULFHYDRYLASE | Authors: | Tran, T.H, Krishnamoorthy, K, Begley, T.P, Ealick, S.E. | Deposit date: | 2011-04-13 | Release date: | 2011-08-17 | Last modified: | 2023-09-13 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | A novel mechanism of sulfur transfer catalyzed by O-acetylhomoserine sulfhydrylase in the methionine-biosynthetic pathway of Wolinella succinogenes. Acta Crystallogr.,Sect.D, 67, 2011
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3AJC
| Structure of the MC domain of FliG (PEV), a CW-biased mutant | Descriptor: | Flagellar motor switch protein fliG | Authors: | Imada, K, Minamino, T, Kinoshita, M, Namba, K. | Deposit date: | 2010-05-27 | Release date: | 2011-05-11 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Structural insight into the rotational switching mechanism of the bacterial flagellar motor Plos Biol., 9, 2011
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4A5S
| CRYSTAL STRUCTURE OF HUMAN DPP4 IN COMPLEX WITH A NOVAL HETEROCYCLIC DPP4 INHIBITOR | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 6-[(3S)-3-AMINOPIPERIDIN-1-YL]-5-BENZYL-4-OXO-3-(QUINOLIN-4-YLMETHYL)-4,5-DIHYDRO-3H-PYRROLO[3,2-D]PYRIMIDINE-7-CARBONITRILE, DIPEPTIDYL PEPTIDASE 4 SOLUBLE FORM, ... | Authors: | Ostermann, N, Kroemer, M, Zink, F, Gerhartz, B, Sutton, J.M, Clark, D.E, Dunsdon, S.J, Fenton, G, Fillmore, A, Harris, N.V, Higgs, C, Hurley, C.A, Krintel, S.L, MacKenzie, R.E, Duttaroy, A, Gangl, E, Maniara, W, Sedrani, R, Namoto, K, Sirockin, F, Trappe, J, Hassiepen, U, Baeschlin, D.K. | Deposit date: | 2011-10-28 | Release date: | 2012-02-08 | Last modified: | 2020-07-29 | Method: | X-RAY DIFFRACTION (1.62 Å) | Cite: | Novel Heterocyclic Dpp-4 Inhibitors for the Treatment of Type 2 Diabetes. Bioorg.Med.Chem.Lett., 22, 2012
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1VGL
| Crystal structure of tetrameric KaiB from T.elongatus BP-1 | Descriptor: | Circadian clock protein kaiB, MERCURY (II) ION | Authors: | Iwase, R, Imada, K, Hayashi, F, Uzumaki, T, Namba, K, Ishiura, M. | Deposit date: | 2004-04-27 | Release date: | 2005-08-16 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (2.6 Å) | Cite: | Functionally important substructures of circadian clock protein KaiB in a unique tetramer complex. J.Biol.Chem., 280, 2005
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2D4V
| Crystal structure of NAD dependent isocitrate dehydrogenase from Acidithiobacillus thiooxidans | Descriptor: | CITRATE ANION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, isocitrate dehydrogenase | Authors: | Imada, K, Tamura, T, Namba, K, Inagaki, K. | Deposit date: | 2005-10-24 | Release date: | 2006-11-14 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Structure and quantum chemical analysis of NAD+-dependent isocitrate dehydrogenase: hydride transfer and co-factor specificity Proteins, 70, 2008
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1UCU
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2D4W
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3A5X
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2ZF8
| Crystal structure of MotY | Descriptor: | Component of sodium-driven polar flagellar motor | Authors: | Imada, K, Kojima, S, Namba, K, Homma, M. | Deposit date: | 2007-12-25 | Release date: | 2008-07-08 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (2.85 Å) | Cite: | Insights into the stator assembly of the Vibrio flagellar motor from the crystal structure of MotY Proc.Natl.Acad.Sci.Usa, 105, 2008
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3A5I
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1T50
| NMR SOLUTION STRUCTURE OF APLYSIA ATTRACTIN | Descriptor: | Attractin | Authors: | Ravindranath, G, Xu, Y, Schein, C.H, Rajaratnam, K, Painter, S.D, Nagle, G.T, Braun, W. | Deposit date: | 2004-04-30 | Release date: | 2004-05-11 | Last modified: | 2022-03-02 | Method: | SOLUTION NMR | Cite: | NMR Solution Structure of Attractin, a Water-Borne Pheromone from the Mollusk Aplysia Attractin Biochemistry, 42, 2003
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2ZOV
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2ZVY
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2ZVZ
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