6XMN
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8GY2
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![BU of 8gy2 by Molmil](/molmil-images/mine/8gy2) | Cryo-EM Structure of Membrane-Bound Alcohol Dehydrogenase from Gluconobacter oxydans | 分子名称: | Alcohol dehydrogenase (quinone), cytochrome c subunit, dehydrogenase subunit, ... | 著者 | Adachi, T, Miyata, T, Makino, F, Tanaka, H, Namba, K, Sowa, K, Kitazumi, Y, Shirai, O. | 登録日 | 2022-09-21 | 公開日 | 2023-08-02 | 実験手法 | ELECTRON MICROSCOPY (2.5 Å) | 主引用文献 | Experimental and Theoretical Insights into Bienzymatic Cascade for Mediatorless Bioelectrochemical Ethanol Oxidation with Alcohol and Aldehyde Dehydrogenases Acs Catalysis, 13, 2023
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8GY3
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![BU of 8gy3 by Molmil](/molmil-images/mine/8gy3) | Cryo-EM Structure of Membrane-Bound Aldehyde Dehydrogenase from Gluconobacter oxydans | 分子名称: | (MOLYBDOPTERIN-CYTOSINE DINUCLEOTIDE-S,S)-DIOXO-AQUA-MOLYBDENUM(V), Cytochrome c subunit of aldehyde dehydrogenase, FE2/S2 (INORGANIC) CLUSTER, ... | 著者 | Adachi, T, Miyata, T, Makino, F, Tanaka, H, Namba, K, Sowa, K, Kitazumi, Y, Shirai, O. | 登録日 | 2022-09-21 | 公開日 | 2023-08-02 | 実験手法 | ELECTRON MICROSCOPY (2.7 Å) | 主引用文献 | Experimental and Theoretical Insights into Bienzymatic Cascade for Mediatorless Bioelectrochemical Ethanol Oxidation with Alcohol and Aldehyde Dehydrogenases Acs Catalysis, 13, 2023
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6JY0
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![BU of 6jy0 by Molmil](/molmil-images/mine/6jy0) | CryoEM structure of S.typhimurium R-type straight flagellar filament made of FljB (A461V) | 分子名称: | Flagellin | 著者 | Yamaguchi, T, Toma, S, Terahara, N, Miyata, T, Minamino, T, Ashikara, M, Namba, K, Kato, T. | 登録日 | 2019-04-25 | 公開日 | 2020-02-19 | 最終更新日 | 2024-03-27 | 実験手法 | ELECTRON MICROSCOPY (3.56 Å) | 主引用文献 | Structural and Functional Comparison ofSalmonellaFlagellar Filaments Composed of FljB and FliC. Biomolecules, 10, 2020
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8K6J
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![BU of 8k6j by Molmil](/molmil-images/mine/8k6j) | Cryo-EM Structure of Membrane-bound Fructose Dehydrogenase from Gluconobacter japonicus variant-H1147A | 分子名称: | FE3-S4 CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, Fructose dehydrogenase (H1147A) large subunit, ... | 著者 | Fukawa, E, Miyata, T, Makino, F, Adachi, T, Suzuki, Y, Tanaka, H, Namba, K, Sowa, K, Kitazumi, Y, Shirai, O. | 登録日 | 2023-07-25 | 公開日 | 2024-05-22 | 実験手法 | ELECTRON MICROSCOPY (2.77 Å) | 主引用文献 | Structural and electrochemical elucidation of biocatalytic mechanisms in direct electron transfer-type D-fructose dehydrogenase. Electrochim Acta, 490, 2024
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8K6K
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![BU of 8k6k by Molmil](/molmil-images/mine/8k6k) | Cryo-EM Structure of Membrane-bound Fructose Dehydrogenase from Gluconobacter japonicus variant-N1146A | 分子名称: | FE3-S4 CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, Fructose dehydrogenase (N1146A) large subunit, ... | 著者 | Fukawa, E, Miyata, T, Makino, F, Adachi, T, Suzuki, Y, Tanaka, H, Namba, K, Sowa, K, Kitazumi, Y, Shirai, O. | 登録日 | 2023-07-25 | 公開日 | 2024-05-22 | 実験手法 | ELECTRON MICROSCOPY (2.4 Å) | 主引用文献 | Structural and electrochemical elucidation of biocatalytic mechanisms in direct electron transfer-type D-fructose dehydrogenase. Electrochim Acta, 490, 2024
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3J82
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![BU of 3j82 by Molmil](/molmil-images/mine/3j82) | Electron cryo-microscopy of DNGR-1 in complex with F-actin | 分子名称: | ADENOSINE-5'-DIPHOSPHATE, Actin, cytoplasmic 1, ... | 著者 | Hanc, P, Fujii, T, Yamada, Y, Huotari, J, Schulz, O, Ahrens, S, Kjaer, S, Way, M, Namba, K, Reis e Sousa, C. | 登録日 | 2014-09-25 | 公開日 | 2015-05-20 | 最終更新日 | 2019-12-18 | 実験手法 | ELECTRON MICROSCOPY (7.7 Å) | 主引用文献 | Structure of the Complex of F-Actin and DNGR-1, a C-Type Lectin Receptor Involved in Dendritic Cell Cross-Presentation of Dead Cell-Associated Antigens. Immunity, 42, 2015
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7CG3
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![BU of 7cg3 by Molmil](/molmil-images/mine/7cg3) | Staggered ring conformation of CtHsp104 (Hsp104 from Chaetomium Thermophilum) | 分子名称: | Heat shock protein 104 | 著者 | Inoue, Y, Hanazono, Y, Noi, K, Kawamoto, A, Kimatsuka, M, Harada, R, Takeda, K, Iwamasa, N, Shibata, K, Noguchi, K, Shigeta, Y, Namba, K, Ogura, T, Miki, K, Shinohara, K, Yohda, M. | 登録日 | 2020-06-30 | 公開日 | 2021-04-28 | 最終更新日 | 2024-05-29 | 実験手法 | ELECTRON MICROSCOPY (5.1 Å) | 主引用文献 | Split conformation of Chaetomium thermophilum Hsp104 disaggregase. Structure, 29, 2021
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8H1O
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![BU of 8h1o by Molmil](/molmil-images/mine/8h1o) | Cryo-EM structure of KpFtsZ-monobody double helical tube | 分子名称: | Cell division protein FtsZ, GUANOSINE-5'-DIPHOSPHATE, Mb(Ec/KpFtsZ_S1) | 著者 | Fujita, J, Amesaka, H, Yoshizawa, T, Kuroda, N, Kamimura, N, Hara, M, Inoue, T, Namba, K, Tanaka, S, Matsumura, H. | 登録日 | 2022-10-03 | 公開日 | 2023-08-02 | 最終更新日 | 2024-07-03 | 実験手法 | ELECTRON MICROSCOPY (2.67 Å) | 主引用文献 | Structures of a FtsZ single protofilament and a double-helical tube in complex with a monobody. Nat Commun, 14, 2023
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3J0R
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![BU of 3j0r by Molmil](/molmil-images/mine/3j0r) | Model of a type III secretion system needle based on a 7 Angstrom resolution cryoEM map | 分子名称: | Protein mxiH | 著者 | Fujii, T, Cheung, M, Blanco, A, Kato, T, Blocker, A.J, Namba, K. | 登録日 | 2011-11-03 | 公開日 | 2012-02-29 | 最終更新日 | 2024-02-21 | 実験手法 | ELECTRON MICROSCOPY (7.7 Å) | 主引用文献 | Structure of a type III secretion needle at 7-A resolution provides insights into its assembly and signaling mechanisms. Proc.Natl.Acad.Sci.USA, 109, 2012
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1GTT
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![BU of 1gtt by Molmil](/molmil-images/mine/1gtt) | CRYSTAL STRUCTURE OF HPCE | 分子名称: | 4-HYDROXYPHENYLACETATE DEGRADATION BIFUNCTIONAL ISOMERASE/DECARBOXYLASE, CALCIUM ION | 著者 | Tame, J.R.H, Namba, K, Dodson, E.J, Roper, D.I. | 登録日 | 2002-01-18 | 公開日 | 2002-03-08 | 最終更新日 | 2019-07-24 | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | 主引用文献 | The Crystal Structure of Hpce, a Bifunctional Decarboxylase/Isomerase with a Multifunctional Fold. Biochemistry, 41, 2002
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3MYU
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![BU of 3myu by Molmil](/molmil-images/mine/3myu) | Mycoplasma genitalium MG289 | 分子名称: | 3-(4-AMINO-2-METHYL-PYRIMIDIN-5-YLMETHYL)-5-(2-HYDROXY-ETHYL)-4-METHYL-THIAZOL-3-IUM, ACETATE ION, High affinity transport system protein p37 | 著者 | Sippel, K.H, Boehlein, S.K, Govindasamy, L, Namiki, K, Satai, Y, Quirit, J.G, Agbandje-McKenna, M, Goodison, S, Rosser, C.J, Sankaran, B, McKenna, R. | 登録日 | 2010-05-11 | 公開日 | 2010-10-20 | 最終更新日 | 2023-09-06 | 実験手法 | X-RAY DIFFRACTION (1.95 Å) | 主引用文献 | Insights into Mycoplasma genitalium metabolism revealed by the structure of MG289, an extracytoplasmic thiamine binding lipoprotein. Proteins, 79, 2011
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4A5S
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![BU of 4a5s by Molmil](/molmil-images/mine/4a5s) | CRYSTAL STRUCTURE OF HUMAN DPP4 IN COMPLEX WITH A NOVAL HETEROCYCLIC DPP4 INHIBITOR | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 6-[(3S)-3-AMINOPIPERIDIN-1-YL]-5-BENZYL-4-OXO-3-(QUINOLIN-4-YLMETHYL)-4,5-DIHYDRO-3H-PYRROLO[3,2-D]PYRIMIDINE-7-CARBONITRILE, DIPEPTIDYL PEPTIDASE 4 SOLUBLE FORM, ... | 著者 | Ostermann, N, Kroemer, M, Zink, F, Gerhartz, B, Sutton, J.M, Clark, D.E, Dunsdon, S.J, Fenton, G, Fillmore, A, Harris, N.V, Higgs, C, Hurley, C.A, Krintel, S.L, MacKenzie, R.E, Duttaroy, A, Gangl, E, Maniara, W, Sedrani, R, Namoto, K, Sirockin, F, Trappe, J, Hassiepen, U, Baeschlin, D.K. | 登録日 | 2011-10-28 | 公開日 | 2012-02-08 | 最終更新日 | 2020-07-29 | 実験手法 | X-RAY DIFFRACTION (1.62 Å) | 主引用文献 | Novel Heterocyclic Dpp-4 Inhibitors for the Treatment of Type 2 Diabetes. Bioorg.Med.Chem.Lett., 22, 2012
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1WLG
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![BU of 1wlg by Molmil](/molmil-images/mine/1wlg) | Crystal structure of FlgE31, a major fragment of the hook protein | 分子名称: | Flagellar hook protein flgE | 著者 | Samatey, F.A, Matsunami, H, Imada, K, Nagashima, S, Shaikh, T.R, Thomas, D.R, DeRosier, D.J, Kitao, A, Namba, K. | 登録日 | 2004-06-25 | 公開日 | 2004-11-02 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Structure of the bacterial flagellar hook and implication for the molecular universal joint mechanism. Nature, 431, 2004
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7BWM
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6KN7
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![BU of 6kn7 by Molmil](/molmil-images/mine/6kn7) | Structure of human cardiac thin filament in the calcium free state | 分子名称: | ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ... | 著者 | Fujii, T, Yamada, Y, Namba, K. | 登録日 | 2019-08-03 | 公開日 | 2020-01-15 | 最終更新日 | 2024-03-27 | 実験手法 | ELECTRON MICROSCOPY (6.6 Å) | 主引用文献 | Cardiac muscle thin filament structures reveal calcium regulatory mechanism. Nat Commun, 11, 2020
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6KN8
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![BU of 6kn8 by Molmil](/molmil-images/mine/6kn8) | Structure of human cardiac thin filament in the calcium bound state | 分子名称: | ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ... | 著者 | Fujii, T, Yamada, Y, Namba, K. | 登録日 | 2019-08-03 | 公開日 | 2020-01-15 | 最終更新日 | 2024-03-27 | 実験手法 | ELECTRON MICROSCOPY (4.8 Å) | 主引用文献 | Cardiac muscle thin filament structures reveal calcium regulatory mechanism. Nat Commun, 11, 2020
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7VPY
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![BU of 7vpy by Molmil](/molmil-images/mine/7vpy) | Crystal structure of the neutralizing nanobody P86 against SARS-CoV-2 | 分子名称: | 1,2-ETHANEDIOL, Nanobody, SULFATE ION | 著者 | Maeda, R, Fujita, J, Konishi, Y, Kazuma, Y, Yamazaki, H, Anzai, I, Yamaguchi, K, Kasai, K, Nagata, K, Yamaoka, Y, Miyakawa, K, Ryo, A, Shirakawa, K, Makino, F, Matsuura, Y, Inoue, T, Imura, A, Namba, K, Takaori-Kondo, A. | 登録日 | 2021-10-18 | 公開日 | 2022-07-20 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | 主引用文献 | A panel of nanobodies recognizing conserved hidden clefts of all SARS-CoV-2 spike variants including Omicron. Commun Biol, 5, 2022
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7VQ0
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![BU of 7vq0 by Molmil](/molmil-images/mine/7vq0) | Cryo-EM structure of the SARS-CoV-2 spike protein (2-up RBD) bound to neutralizing nanobodies P86 | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ... | 著者 | Maeda, R, Fujita, J, Konishi, Y, Kazuma, Y, Yamazaki, H, Anzai, I, Yamaguchi, K, Kasai, K, Nagata, K, Yamaoka, Y, Miyakawa, K, Ryo, A, Shirakawa, K, Makino, F, Matsuura, Y, Inoue, T, Imura, A, Namba, K, Takaori-Kondo, A. | 登録日 | 2021-10-18 | 公開日 | 2022-07-20 | 実験手法 | ELECTRON MICROSCOPY (3.03 Å) | 主引用文献 | A panel of nanobodies recognizing conserved hidden clefts of all SARS-CoV-2 spike variants including Omicron. Commun Biol, 5, 2022
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4A6J
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![BU of 4a6j by Molmil](/molmil-images/mine/4a6j) | Structural model of ParM filament based on CryoEM map | 分子名称: | MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, PLASMID SEGREGATION PROTEIN PARM | 著者 | Gayathri, P, Fujii, T, Moller-Jensen, J, Van Den Ent, F, Namba, K, Lowe, J. | 登録日 | 2011-11-04 | 公開日 | 2012-11-21 | 最終更新日 | 2024-05-08 | 実験手法 | ELECTRON MICROSCOPY (7.2 Å) | 主引用文献 | A Bipolar Spindle of Antiparallel Parm Filaments Drives Bacterial Plasmid Segregation. Science, 338, 2012
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5AX2
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![BU of 5ax2 by Molmil](/molmil-images/mine/5ax2) | Crystal structure of S.cerevisiae Kti11p | 分子名称: | CADMIUM ION, Diphthamide biosynthesis protein 3 | 著者 | Kumar, A, Nagarathinam, K, Tanabe, M, Balbach, J. | 登録日 | 2015-07-13 | 公開日 | 2016-07-20 | 最終更新日 | 2019-02-20 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Hyperbolic Pressure-Temperature Phase Diagram of the Zinc-Finger Protein apoKti11 Detected by NMR Spectroscopy. J Phys Chem B, 123, 2019
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6K9Q
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![BU of 6k9q by Molmil](/molmil-images/mine/6k9q) | Structure of the native supercoiled hook as a universal joint | 分子名称: | Flagellar hook protein FlgE | 著者 | Kato, T, Miyata, T, Makino, F, Horvath, P, Namba, K. | 登録日 | 2019-06-17 | 公開日 | 2020-02-12 | 最終更新日 | 2024-03-27 | 実験手法 | ELECTRON MICROSCOPY (3.1 Å) | 主引用文献 | Structure of the native supercoiled flagellar hook as a universal joint. Nat Commun, 10, 2019
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4ZER
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![BU of 4zer by Molmil](/molmil-images/mine/4zer) | Crystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosome | 分子名称: | (4S)-2-METHYL-2,4-PENTANEDIOL, 16s ribosomal RNA, 23s ribosomal RNA, ... | 著者 | Seefeldt, A.C, Nguyen, F, Antunes, S, Perebaskine, N, Graf, M, Arenz, S, Inampudi, K.K, Douat, C, Guichard, G, Wilson, D.N, Innis, C.A. | 登録日 | 2015-04-20 | 公開日 | 2015-05-20 | 最終更新日 | 2024-04-24 | 実験手法 | X-RAY DIFFRACTION (3.1 Å) | 主引用文献 | The proline-rich antimicrobial peptide Onc112 inhibits translation by blocking and destabilizing the initiation complex. Nat.Struct.Mol.Biol., 22, 2015
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7VW6
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![BU of 7vw6 by Molmil](/molmil-images/mine/7vw6) | Cryo-EM Structure of Formate Dehydrogenase 1 from Methylorubrum extorquens AM1 | 分子名称: | 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, ... | 著者 | Yoshikawa, T, Makino, F, Miyata, T, Suzuki, Y, Tanaka, H, Namba, K, Sowa, K, Kitazumi, Y, Shirai, O. | 登録日 | 2021-11-09 | 公開日 | 2022-06-01 | 最終更新日 | 2024-06-26 | 実験手法 | ELECTRON MICROSCOPY (2.19 Å) | 主引用文献 | Multiple electron transfer pathways of tungsten-containing formate dehydrogenase in direct electron transfer-type bioelectrocatalysis. Chem.Commun.(Camb.), 58, 2022
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5H53
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![BU of 5h53 by Molmil](/molmil-images/mine/5h53) | |