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PDB: 90 results

5H6K
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BU of 5h6k by Molmil
DNA targeting ADP-ribosyltransferase Pierisin-1
Descriptor: 1,2-ETHANEDIOL, Pierisin-1
Authors:Oda, T, Hirabayashi, H, Shikauchi, G, Takamura, R, Hiraga, K, Minami, H, Hashimoto, H, Yamamoto, M, Wakabayashi, K, Sugimura, T, Shimizu, T, Sato, M.
Deposit date:2016-11-14
Release date:2017-08-09
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis of autoinhibition and activation of the DNA-targeting ADP-ribosyltransferase pierisin-1
J. Biol. Chem., 292, 2017
5H6N
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BU of 5h6n by Molmil
DNA targeting ADP-ribosyltransferase Pierisin-1, autoinhibitory form
Descriptor: Pierisin-1
Authors:Oda, T, Hirabayashi, H, Shikauchi, G, Takamura, R, Hiraga, K, Minami, H, Hashimoto, H, Yamamoto, M, Wakabayashi, K, Sugimura, T, Shimizu, T, Sato, M.
Deposit date:2016-11-14
Release date:2017-08-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis of autoinhibition and activation of the DNA-targeting ADP-ribosyltransferase pierisin-1
J. Biol. Chem., 292, 2017
5H6L
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BU of 5h6l by Molmil
DNA targeting ADP-ribosyltransferase Pierisin-1 in complex with beta-NAD+
Descriptor: 1,2-ETHANEDIOL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Pierisin-1
Authors:Oda, T, Hirabayashi, H, Shikauchi, G, Takamura, R, Hiraga, K, Minami, H, Hashimoto, H, Yamamoto, M, Wakabayashi, K, Sugimura, T, Shimizu, T, Sato, M.
Deposit date:2016-11-14
Release date:2017-08-09
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis of autoinhibition and activation of the DNA-targeting ADP-ribosyltransferase pierisin-1
J. Biol. Chem., 292, 2017
5H6M
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BU of 5h6m by Molmil
DNA targeting ADP-ribosyltransferase Pierisin-1
Descriptor: 1,2-ETHANEDIOL, Pierisin-1
Authors:Oda, T, Hirabayashi, H, Shikauchi, G, Takamura, R, Hiraga, K, Minami, H, Hashimoto, H, Yamamoto, M, Wakabayashi, K, Sugimura, T, Shimizu, T, Sato, M.
Deposit date:2016-11-14
Release date:2017-08-09
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis of autoinhibition and activation of the DNA-targeting ADP-ribosyltransferase pierisin-1
J. Biol. Chem., 292, 2017
7VFD
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BU of 7vfd by Molmil
Cryo-EM structure of Vaccinia virus scaffolding protein D13
Descriptor: Scaffold protein D13
Authors:Wolf, M, Hyun, J, Matsunami, H, Kim, T.G.
Deposit date:2021-09-13
Release date:2022-02-23
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.25 Å)
Cite:Assembly mechanism of the pleomorphic immature poxvirus scaffold.
Nat Commun, 13, 2022
7VFG
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BU of 7vfg by Molmil
Cryo-EM structure of Vaccinia virus scaffolding protein D13 trimer doublet
Descriptor: Scaffold protein D13
Authors:Wolf, M, Hyun, J, Matsunami, H, Kim, T.G.
Deposit date:2021-09-13
Release date:2022-02-23
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.87 Å)
Cite:Assembly mechanism of the pleomorphic immature poxvirus scaffold.
Nat Commun, 13, 2022
7VFE
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BU of 7vfe by Molmil
Cryo-EM structure of Vaccinia virus scaffolding protein D13 with N-terminal polyhistidine tag
Descriptor: Scaffold protein D13
Authors:Wolf, M, Hyun, J, Matsunami, H, Kim, T.G.
Deposit date:2021-09-13
Release date:2022-02-23
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.63 Å)
Cite:Assembly mechanism of the pleomorphic immature poxvirus scaffold.
Nat Commun, 13, 2022
7VFF
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BU of 7vff by Molmil
Cryo-EM structure of Vaccinia virus scaffolding protein D13 with N-terminal 17 residue truncation
Descriptor: Scaffold protein D13
Authors:Wolf, M, Hyun, J, Matsunami, H, Kim, T.G.
Deposit date:2021-09-13
Release date:2022-02-23
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Assembly mechanism of the pleomorphic immature poxvirus scaffold.
Nat Commun, 13, 2022
5AY6
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BU of 5ay6 by Molmil
32 kDa Fragment of the Flagellar hook protein FlgE from Caulobacter crescentus
Descriptor: Flagellar hook protein FlgE
Authors:Yoon, Y.-H, Matsunami, H, Samatey, F.A.
Deposit date:2015-08-10
Release date:2016-08-17
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.839 Å)
Cite:Structural insights into bacterial flagellar hooks similarities and specificities
Sci Rep, 6, 2016
1WLG
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BU of 1wlg by Molmil
Crystal structure of FlgE31, a major fragment of the hook protein
Descriptor: Flagellar hook protein flgE
Authors:Samatey, F.A, Matsunami, H, Imada, K, Nagashima, S, Shaikh, T.R, Thomas, D.R, DeRosier, D.J, Kitao, A, Namba, K.
Deposit date:2004-06-25
Release date:2004-11-02
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of the bacterial flagellar hook and implication for the molecular universal joint mechanism.
Nature, 431, 2004
6K3I
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BU of 6k3i by Molmil
Salmonella hook in curved state - 66 subunit models
Descriptor: Flagellar hook protein FlgE
Authors:Shibata, S, Matsunami, H, Wolf, M, Aizawa, S.
Deposit date:2019-05-19
Release date:2019-10-02
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.86 Å)
Cite:Torque transmission mechanism of the curved bacterial flagellar hook revealed by cryo-EM.
Nat.Struct.Mol.Biol., 26, 2019
8UPS
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BU of 8ups by Molmil
Structure of SARS-Cov2 3CLPro in complex with Compound 5
Descriptor: (1R,2S,5S)-N-{(2S,3R)-4-amino-3-hydroxy-4-oxo-1-[(3S)-2-oxopyrrolidin-3-yl]butan-2-yl}-3-[N-(tert-butylcarbamoyl)-3-methyl-L-valyl]-6,6-dimethyl-3-azabicyclo[3.1.0]hexane-2-carboxamide, 3C-like proteinase nsp5, PHOSPHATE ION
Authors:Wu, Y, Qiang, D, Zhuang, N, Krishnamurthy, H, Klein, D.J.
Deposit date:2023-10-23
Release date:2024-03-06
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Invention of MK-7845, a SARS-CoV-2 3CL Protease Inhibitor Employing a Novel Difluorinated Glutamine Mimic.
J.Med.Chem., 67, 2024
5Z9W
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BU of 5z9w by Molmil
Ebola virus nucleoprotein-RNA complex
Descriptor: Ebolavirus nucleoprotein (residues 19-406), RNA (6-MER)
Authors:Sugita, Y, Matsunami, H, Kawaoka, Y, Noda, T, Wolf, M.
Deposit date:2018-02-05
Release date:2018-10-24
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Cryo-EM structure of the Ebola virus nucleoprotein-RNA complex at 3.6 angstrom resolution.
Nature, 563, 2018
1V5B
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BU of 1v5b by Molmil
The Structure Of The Mutant, S225A and E251L, Of 3-Isopropylmalate Dehydrogenase From Bacillus Coagulans
Descriptor: 3-isopropylmalate dehydrogenase, SULFATE ION
Authors:Fujita, K, Minami, H, Suzuki, K, Tsunoda, M, Sekiguchi, T, Mizui, R, Tsuzaki, S, Nakamura, S, Takenaka, A.
Deposit date:2003-11-22
Release date:2005-02-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Crystal structure of a highly thermo-stabilized mutant of 3-isopropylmalate dehydrogenase from Bacillus coagulans: An evaluation of local packing density in the hydrophobic core
To be Published
1V53
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BU of 1v53 by Molmil
The crystal structure of 3-isopropylmalate dehydrogenase from Bacillus coagulans
Descriptor: 3-isopropylmalate dehydrogenase
Authors:Fujita, K, Minami, H, Suzuki, K, Tsunoda, M, Sekiguchi, T, Mizui, R, Tsuzaki, S, Nakamura, S, Takenaka, A.
Deposit date:2003-11-20
Release date:2005-02-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:The crystal structure of 3-isopropylmalate dehydrogenase from Bacillus coagulans
To be Published
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