1WR6
| Crystal structure of GGA3 GAT domain in complex with ubiquitin | 分子名称: | ADP-ribosylation factor binding protein GGA3, ubiquitin | 著者 | Kawasaki, M, Shiba, T, Shiba, Y, Yamaguchi, Y, Matsugaki, N, Igarashi, N, Suzuki, M, Kato, R, Kato, K, Nakayama, K, Wakatsuki, S. | 登録日 | 2004-10-12 | 公開日 | 2005-06-28 | 最終更新日 | 2011-07-13 | 実験手法 | X-RAY DIFFRACTION (2.6 Å) | 主引用文献 | Molecular mechanism of ubiquitin recognition by GGA3 GAT domain. Genes Cells, 10, 2005
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1WRD
| Crystal structure of Tom1 GAT domain in complex with ubiquitin | 分子名称: | Target of Myb protein 1, Ubiquitin | 著者 | Akutsu, M, Kawasaki, M, Katoh, Y, Shiba, T, Yamaguchi, Y, Kato, R, Kato, K, Nakayama, K, Wakatsuki, S. | 登録日 | 2004-10-14 | 公開日 | 2005-10-11 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (1.75 Å) | 主引用文献 | Structural basis for recognition of ubiquitinated cargo by Tom1-GAT domain. Febs Lett., 579, 2005
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5CAG
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5X6V
| Crystal structure of human heteroheptameric complex | 分子名称: | ACETATE ION, Ragulator complex protein LAMTOR1, Ragulator complex protein LAMTOR2, ... | 著者 | Yonehara, R, Nada, S, Nakai, T, Nakai, M, Kitamura, A, Ogawa, A, Nakatsumi, H, Nakayama, K.I, Li, S, Standley, D.M, Yamashita, E, Nakagawa, A, Okada, M. | 登録日 | 2017-02-23 | 公開日 | 2017-12-06 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (2.02 Å) | 主引用文献 | Structural basis for the assembly of the Ragulator-Rag GTPase complex. Nat Commun, 8, 2017
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1O3Y
| Crystal structure of mouse ARF1 (delta17-Q71L), GTP form | 分子名称: | ADP-ribosylation factor 1, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION | 著者 | Shiba, T, Kawasaki, M, Takatsu, H, Nogi, T, Matsugaki, N, Igarashi, N, Suzuki, M, Kato, R, Nakayama, K, Wakatsuki, S. | 登録日 | 2003-05-08 | 公開日 | 2003-05-20 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (1.5 Å) | 主引用文献 | Molecular mechanism of membrane recruitment of GGA by ARF in lysosomal protein transport Nat.Struct.Biol., 10, 2003
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1O3X
| Crystal structure of human GGA1 GAT domain | 分子名称: | ADP-ribosylation factor binding protein GGA1 | 著者 | Shiba, T, Kawasaki, M, Takatsu, H, Nogi, T, Matsugaki, N, Igarashi, N, Suzuki, M, Kato, R, Nakayama, K, Wakatsuki, S. | 登録日 | 2003-05-08 | 公開日 | 2003-05-20 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | 主引用文献 | Molecular Mechanism of Membrane Recruitment of Gga by Arf in Lysosomal Protein Transport Nat.Struct.Biol., 10, 2003
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6KJK
| Structure of the N-terminal domain of PorA | 分子名称: | N-terminal domain of PorA (28-171) | 著者 | Handa, Y, Sato, K, Shoji, M, Nakayama, K, Imada, K. | 登録日 | 2019-07-22 | 公開日 | 2020-07-22 | 最終更新日 | 2020-12-16 | 実験手法 | X-RAY DIFFRACTION (1.3 Å) | 主引用文献 | PorA, a conserved C-terminal domain-containing protein, impacts the PorXY-SigP signaling of the type IX secretion system. Sci Rep, 10, 2020
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5X6U
| Crystal structure of human heteropentameric complex | 分子名称: | Ragulator complex protein LAMTOR1, Ragulator complex protein LAMTOR2, Ragulator complex protein LAMTOR3, ... | 著者 | Yonehara, R, Nada, S, Nakai, T, Nakai, M, Kitamura, A, Ogawa, A, Nakatsumi, H, Nakayama, K.I, Li, S, Standley, D.M, Yamashita, E, Nakagawa, A, Okada, M. | 登録日 | 2017-02-23 | 公開日 | 2017-12-06 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Structural basis for the assembly of the Ragulator-Rag GTPase complex. Nat Commun, 8, 2017
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6KMF
| FimA type V pilus from P.gingivalis | 分子名称: | Major fimbrium subunit FimA type-1 | 著者 | Shibata, S, Shoji, M, Matsunami, H, Matthews, M, Imada, K, Nakayama, K, Wolf, M. | 登録日 | 2019-07-31 | 公開日 | 2020-04-15 | 最終更新日 | 2024-03-27 | 実験手法 | ELECTRON MICROSCOPY (3.6 Å) | 主引用文献 | Structure of polymerized type V pilin reveals assembly mechanism involving protease-mediated strand exchange. Nat Microbiol, 5, 2020
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3VHX
| The crystal structure of Arf6-MKLP1 (Mitotic kinesin-like protein 1) complex | 分子名称: | ADP-ribosylation factor 6, GLYCEROL, GUANOSINE-5'-TRIPHOSPHATE, ... | 著者 | Makyio, H, Takei, T, Ohgi, H, Takahashi, S, Takatsu, H, Ueda, T, Kanaho, Y, Xie, Y, Shin, H.W, Kamikubo, H, Kataoka, M, Kawasaki, M, Kato, R, Wakatsuki, S, Nakayama, K. | 登録日 | 2011-09-12 | 公開日 | 2012-05-16 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.81 Å) | 主引用文献 | Structural basis for Arf6-MKLP1 complex formation on the Flemming body responsible for cytokinesis Embo J., 31, 2012
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1JWG
| VHS Domain of human GGA1 complexed with cation-independent M6PR C-terminal Peptide | 分子名称: | ADP-ribosylation factor binding protein GGA1, Cation-independent mannose-6-phosphate receptor, IODIDE ION | 著者 | Shiba, T, Takatsu, H, Nogi, T, Matsugaki, N, Kawasaki, M, Igarashi, N, Suzuki, M, Kato, R, Earnest, T, Nakayama, K, Wakatsuki, S. | 登録日 | 2001-09-04 | 公開日 | 2002-03-06 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Structural basis for recognition of acidic-cluster dileucine sequence by GGA1. Nature, 415, 2002
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2DWX
| Co-crystal Structure Analysis of GGA1-GAE with the WNSF motif | 分子名称: | ADP-ribosylation factor-binding protein GGA1, hinge peptide from ADP-ribosylation factor binding protein GGA1 | 著者 | Inoue, M, Shiba, T, Yamada, Y, Ihara, K, Kawasaki, M, Kato, R, Nakayama, K, Wakatsuki, S. | 登録日 | 2006-08-21 | 公開日 | 2007-04-17 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.55 Å) | 主引用文献 | Molecular Basis for Autoregulatory Interaction Between GAE Domain and Hinge Region of GGA1 Traffic, 8, 2007
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1J2J
| Crystal structure of GGA1 GAT N-terminal region in complex with ARF1 GTP form | 分子名称: | ADP-ribosylation factor 1, ADP-ribosylation factor binding protein GGA1, GUANOSINE-5'-TRIPHOSPHATE, ... | 著者 | Shiba, T, Kawasaki, M, Takatsu, H, Nogi, T, Matsugaki, N, Igarashi, N, Suzuki, M, Kato, R, Nakayama, K, Wakatsuki, S. | 登録日 | 2003-01-05 | 公開日 | 2003-05-06 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | 主引用文献 | Molecular mechanism of membrane recruitment of GGA by ARF in lysosomal protein transport NAT.STRUCT.BIOL., 10, 2003
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1IU1
| Crystal structure of human gamma1-adaptin ear domain | 分子名称: | gamma1-adaptin | 著者 | Nogi, T, Shiba, Y, Kawasaki, M, Shiba, T, Matsugaki, N, Igarashi, N, Suzuki, M, Kato, R, Takatsu, H, Nakayama, K, Wakatsuki, S. | 登録日 | 2002-02-19 | 公開日 | 2002-07-10 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Structural basis for the accessory protein recruitment by the gamma-adaptin ear domain. Nat.Struct.Biol., 9, 2002
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1JWF
| Crystal Structure of human GGA1 VHS domain. | 分子名称: | ADP-ribosylation factor binding protein GGA1 | 著者 | Shiba, T, Takatsu, H, Nogi, T, Matsugaki, N, Kawasaki, M, Igarashi, N, Suzuki, M, Kato, R, Earnest, T, Nakayama, K, Wakatsuki, S. | 登録日 | 2001-09-04 | 公開日 | 2002-03-06 | 最終更新日 | 2018-06-20 | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | 主引用文献 | Structural basis for recognition of acidic-cluster dileucine sequence by GGA1. Nature, 415, 2002
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2DWY
| Crystal Structure Analysis of GGA1-GAE | 分子名称: | ADP-RIBOSYLATION FACTOR BINDING PROTEIN GGA1 | 著者 | Inoue, M, Shiba, T, Yamada, Y, Ihara, K, Kawasaki, M, Kato, R, Nakayama, K, Wakatsuki, S. | 登録日 | 2006-08-21 | 公開日 | 2007-04-17 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Molecular Basis for Autoregulatory Interaction Between GAE Domain and Hinge Region of GGA1 Traffic, 8, 2007
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2D7C
| Crystal structure of human Rab11 in complex with FIP3 Rab-binding domain | 分子名称: | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... | 著者 | Shiba, T, Koga, H, Shin, H.W, Kawasaki, M, Kato, R, Nakayama, K, Wakatsuki, S. | 登録日 | 2005-11-16 | 公開日 | 2006-09-26 | 最終更新日 | 2021-11-10 | 実験手法 | X-RAY DIFFRACTION (1.75 Å) | 主引用文献 | Structural basis for Rab11-dependent membrane recruitment of a family of Rab11-interacting protein 3 (FIP3)/Arfophilin-1. Proc.Natl.Acad.Sci.Usa, 103, 2006
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