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PDB: 282 results
7QOS
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BU of 7qos by Molmil
Cyclopropane fatty acid synthase from Aquifex aeolicous with bound ligands
Descriptor: 2-azanylethyl-[(2~{S})-2,3-di(hexadecanoyloxy)propoxy]phosphinic acid, CARBONATE ION, Cyclopropane-fatty-acyl-phospholipid synthase, ...
Authors:Lukk, T, Cronan, J.E, Nair, S.K.
Deposit date:2021-12-28
Release date:2022-02-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of cyclopropane fatty acid synthase from Aquifex aeolicus
To Be Published
6D6A
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BU of 6d6a by Molmil
The structure of ligand binding domain of LasR in complex with TP-1 homolog, compound 10
Descriptor: 2,4-dibromo-6-{[(2-nitrobenzene-1-carbonyl)amino]methyl}phenyl benzoate, Transcriptional activator protein LasR
Authors:Dong, S.H, Nair, S.K.
Deposit date:2018-04-20
Release date:2018-08-08
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and Biochemical Studies of Non-native Agonists of the LasR Quorum-Sensing Receptor Reveal an L3 Loop "Out" Conformation for LasR.
Cell Chem Biol, 25, 2018
6D6M
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BU of 6d6m by Molmil
The structure of ligand binding domain of LasR in complex with TP-1 homolog, compound 15
Descriptor: 2,4-dibromo-6-{[(2-nitrobenzene-1-carbonyl)amino]methyl}phenyl 4-bromobenzoate, Transcriptional activator protein LasR
Authors:Dong, S.H, Nair, S.K.
Deposit date:2018-04-21
Release date:2018-08-08
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and Biochemical Studies of Non-native Agonists of the LasR Quorum-Sensing Receptor Reveal an L3 Loop "Out" Conformation for LasR.
Cell Chem Biol, 25, 2018
4WD9
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BU of 4wd9 by Molmil
Crystal structure of tRNA-dependent lantibiotic dehydratase NisB in complex with NisA leader peptide
Descriptor: Nisin biosynthesis protein NisB
Authors:Hao, Y, Nair, S.K.
Deposit date:2014-09-08
Release date:2014-10-29
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure and mechanism of the tRNA-dependent lantibiotic dehydratase NisB.
Nature, 517, 2015
3TBC
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BU of 3tbc by Molmil
Small laccase from Streptomyces viridosporus T7A; alternate crystal form complexed with acetovanillone.
Descriptor: 1-(4-hydroxy-3-methoxyphenyl)ethanone, COPPER (II) ION, OXYGEN MOLECULE, ...
Authors:Lukk, T, Majumdar, S, Gerlt, J.A, Nair, S.K.
Deposit date:2011-08-05
Release date:2012-08-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Roles of small laccases from Streptomyces in lignin degradation.
Biochemistry, 53, 2014
3TAS
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BU of 3tas by Molmil
Small laccase from Streptomyces viridosporus T7A
Descriptor: ACETATE ION, COPPER (II) ION, OXYGEN MOLECULE, ...
Authors:Lukk, T, Majumdar, S, Gerlt, J.A, Nair, S.K.
Deposit date:2011-08-04
Release date:2012-08-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Roles of small laccases from Streptomyces in lignin degradation.
Biochemistry, 53, 2014
3TA4
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BU of 3ta4 by Molmil
Small laccase from Amycolatopsis sp. ATCC 39116 complexed with 1-(3,4-dimethoxyphenyl)-2-(2-methoxyphenoxy)-1,3-dihydroxypropane
Descriptor: (1R,2S)-1-(3,4-dimethoxyphenyl)-2-(2-methoxyphenoxy)propane-1,3-diol, COPPER (II) ION, small laccase, ...
Authors:Lukk, T, Majumdar, S, Gerlt, J.A, Nair, S.K.
Deposit date:2011-08-03
Release date:2012-09-12
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Roles of small laccases from Streptomyces in lignin degradation.
Biochemistry, 53, 2014
3TBB
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BU of 3tbb by Molmil
Small laccase from Streptomyces viridosporus T7A; alternate crystal form.
Descriptor: COPPER (II) ION, OXYGEN MOLECULE, PHOSPHATE ION, ...
Authors:Lukk, T, Majumdar, S, Gerlt, J.A, Nair, S.K.
Deposit date:2011-08-05
Release date:2012-08-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Roles of small laccases from Streptomyces in lignin degradation.
Biochemistry, 53, 2014
3T9W
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BU of 3t9w by Molmil
Small laccase from Amycolatopsis sp. ATCC 39116
Descriptor: COPPER (II) ION, HYDROGEN PEROXIDE, NICKEL (II) ION, ...
Authors:Lukk, T, Majumdar, S, Gerlt, J.A, Nair, S.K.
Deposit date:2011-08-03
Release date:2012-08-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Roles of small laccases from Streptomyces in lignin degradation.
Biochemistry, 53, 2014
7RC3
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BU of 7rc3 by Molmil
Aeronamide N-methyltransferase, AerE (Y137F)
Descriptor: ASPARTIC ACID, CALCIUM ION, HEXAETHYLENE GLYCOL, ...
Authors:Cogan, D.P, Reyes, R, Nair, S.K.
Deposit date:2021-07-07
Release date:2022-03-30
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Structure and mechanism for iterative amide N -methylation in the biosynthesis of channel-forming peptide cytotoxins.
Proc.Natl.Acad.Sci.USA, 119, 2022
7RC6
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BU of 7rc6 by Molmil
Aeronamide N-methyltransferase, AerE, bound to modified peptide substrate, AerA-DL,34
Descriptor: Aeronamide A peptide, Methyltransferase family protein, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Cogan, D.P, Reyes, R, Nair, S.K.
Deposit date:2021-07-07
Release date:2022-03-30
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Structure and mechanism for iterative amide N -methylation in the biosynthesis of channel-forming peptide cytotoxins.
Proc.Natl.Acad.Sci.USA, 119, 2022
7RC4
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BU of 7rc4 by Molmil
Aeronamide N-methyltransferase, AerE (D141A)
Descriptor: CALCIUM ION, HEXAETHYLENE GLYCOL, Methyltransferase family protein, ...
Authors:Cogan, D.P, Reyes, R, Nair, S.K.
Deposit date:2021-07-07
Release date:2022-03-30
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Structure and mechanism for iterative amide N -methylation in the biosynthesis of channel-forming peptide cytotoxins.
Proc.Natl.Acad.Sci.USA, 119, 2022
7RC5
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BU of 7rc5 by Molmil
Aeronamide N-methyltransferase, AerE (N231A)
Descriptor: CALCIUM ION, Methyltransferase family protein, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Cogan, D.P, Reyes, R, Nair, S.K.
Deposit date:2021-07-07
Release date:2022-03-30
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Structure and mechanism for iterative amide N -methylation in the biosynthesis of channel-forming peptide cytotoxins.
Proc.Natl.Acad.Sci.USA, 119, 2022
7RC2
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BU of 7rc2 by Molmil
Aeronamide N-methyltransferase, AerE
Descriptor: CALCIUM ION, Methyltransferase family protein, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Cogan, D.P, Reyes, R, Nair, S.K.
Deposit date:2021-07-07
Release date:2022-03-30
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Structure and mechanism for iterative amide N -methylation in the biosynthesis of channel-forming peptide cytotoxins.
Proc.Natl.Acad.Sci.USA, 119, 2022
3T00
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BU of 3t00 by Molmil
Crystal Structure of Phosphonoacetate hydrolase from Sinorhizobium meliloti 1021 in complex with vanadate
Descriptor: NICKEL (II) ION, VANADATE ION, ZINC ION, ...
Authors:Agarwal, V, Nair, S.K.
Deposit date:2011-07-19
Release date:2011-08-03
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and mechanistic insights into C-p bond hydrolysis by phosphonoacetate hydrolase.
Chem.Biol., 18, 2011
3T02
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BU of 3t02 by Molmil
Crystal Structure of Phosphonoacetate hydrolase from Sinorhizobium meliloti 1021 in complex with Phosphonoacetate
Descriptor: PHOSPHONOACETIC ACID, ZINC ION, phosphonoacetate hydrolase
Authors:Agarwal, V, Nair, S.K.
Deposit date:2011-07-19
Release date:2011-08-03
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and mechanistic insights into C-p bond hydrolysis by phosphonoacetate hydrolase.
Chem.Biol., 18, 2011
7RTY
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BU of 7rty by Molmil
Crystal Structure of PsfC from Pseudomonas syringae PB-5123
Descriptor: FE (II) ION, PsfC
Authors:Ongpipattanakul, C, Nair, S.K.
Deposit date:2021-08-16
Release date:2021-09-15
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.963 Å)
Cite:Biosynthesis of fosfomycin in pseudomonads reveals an unexpected enzymatic activity in the metallohydrolase superfamily.
Proc.Natl.Acad.Sci.USA, 118, 2021
8CZL
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BU of 8czl by Molmil
Human LanCL1 bound to methyl glutathione (MeGSH)
Descriptor: Glutathione S-transferase LANCL1, L-GAMMA-GLUTAMYL-S-METHYLCYSTEINYLGLYCINE, ZINC ION
Authors:Ongpipattanakul, C, Nair, S.K.
Deposit date:2022-05-24
Release date:2023-01-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:The mechanism of thia-Michael addition catalyzed by LanC enzymes.
Proc.Natl.Acad.Sci.USA, 120, 2023
3TLG
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BU of 3tlg by Molmil
Microcin C7 self immunity protein MccF in the inactive mutant APO state
Descriptor: MccF
Authors:Agarwal, V, Nair, S.K.
Deposit date:2011-08-29
Release date:2012-02-29
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (1.4993 Å)
Cite:Structure and function of a serine carboxypeptidase adapted for degradation of the protein synthesis antibiotic microcin C7.
Proc.Natl.Acad.Sci.USA, 109, 2012
3TLC
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BU of 3tlc by Molmil
Microcin C7 self immunity protein MccF in complex with Microcin C7 antibiotic
Descriptor: 1,2-ETHANEDIOL, 5'-O-[(R)-(3-aminopropoxy)(L-alpha-aspartylamino)phosphoryl]adenosine, MccF
Authors:Agarwal, V, Nair, S.K.
Deposit date:2011-08-29
Release date:2012-02-29
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structure and function of a serine carboxypeptidase adapted for degradation of the protein synthesis antibiotic microcin C7.
Proc.Natl.Acad.Sci.USA, 109, 2012
8CZK
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BU of 8czk by Molmil
Human LanCL1 bound to GSH and Dhb-Erk peptide
Descriptor: Deb-Erk peptide, GLUTATHIONE, Glutathione S-transferase LANCL1, ...
Authors:Ongpipattanakul, C, Nair, S.K.
Deposit date:2022-05-24
Release date:2023-01-25
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:The mechanism of thia-Michael addition catalyzed by LanC enzymes.
Proc.Natl.Acad.Sci.USA, 120, 2023
8D19
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BU of 8d19 by Molmil
Human LanCL1 bound to GSH
Descriptor: GLUTATHIONE, Glutathione S-transferase LANCL1, ZINC ION
Authors:Ongpipattanakul, C, Nair, S.K.
Deposit date:2022-05-26
Release date:2023-01-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:The mechanism of thia-Michael addition catalyzed by LanC enzymes.
Proc.Natl.Acad.Sci.USA, 120, 2023
8D0V
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BU of 8d0v by Molmil
Human LanCL1 C264A mutant bound to GSH
Descriptor: GLUTATHIONE, Glutathione S-transferase LANCL1, ZINC ION
Authors:Ongpipattanakul, C, Nair, S.K.
Deposit date:2022-05-26
Release date:2023-01-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:The mechanism of thia-Michael addition catalyzed by LanC enzymes.
Proc.Natl.Acad.Sci.USA, 120, 2023
7UD6
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BU of 7ud6 by Molmil
Designed Enzyme SH3-588 (Catechol O-methyltransferase catalytic domain and Src homology 3 binding domain fusion)
Descriptor: POTASSIUM ION, S-ADENOSYL-L-HOMOCYSTEINE, Tyrosine-protein kinase Fyn,Catechol O-methyltransferase
Authors:Ongpipattanakul, C, Nair, S.K.
Deposit date:2022-03-18
Release date:2023-01-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Designer installation of a substrate recruitment domain to tailor enzyme specificity.
Nat.Chem.Biol., 19, 2023
6OM4
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BU of 6om4 by Molmil
The structure of Microcin C7 biosynthetic enzyme MccB in complex with N-formylated MccA
Descriptor: 5'-O-[(S)-amino(hydroxy)phosphoryl]adenosine, MAGNESIUM ION, MccB protein, ...
Authors:Dong, S.-H, Nair, S.K.
Deposit date:2019-04-18
Release date:2019-05-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Biosynthesis of the RiPP trojan horse nucleotide antibiotic microcin C is directed by theN-formyl of the peptide precursor.
Chem Sci, 10, 2019

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數據於2024-07-31公開中

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