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PDB: 282 results

1OKN
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BU of 1okn by Molmil
CARBONIC ANHYDRASE II COMPLEX WITH THE 1OKN INHIBITOR 4-SULFONAMIDE-[1-(4-N-(5-FLUORESCEIN THIOUREA)BUTANE)]
Descriptor: 4-SULFONAMIDE-[4-(THIOMETHYLAMINOBUTANE)]BENZAMIDE, CARBONIC ANHYDRASE II, MERCURY (II) ION, ...
Authors:Elbaum, D, Nair, S.K, Patchan, M.W, Thompson, R.B, Christianson, D.W.
Deposit date:1996-06-25
Release date:1997-01-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure-based design of a sulfonamide probe for fluorescence anisotropy detection of zinc with a carbonic anhydrase-based biosensor.
J.Am.Chem.Soc., 118, 1996
6WPA
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BU of 6wpa by Molmil
Structure of AvaR1 bound to DNA half-site
Descriptor: AvaR1, PAL2-1-5'-GC
Authors:Kapoor, I, Olivares, P.J, Nair, S.K.
Deposit date:2020-04-26
Release date:2020-07-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.09 Å)
Cite:Biochemical basis for the regulation of biosynthesis of antiparasitics by bacterial hormones.
Elife, 9, 2020
5DM0
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BU of 5dm0 by Molmil
Crystal structure of the plantazolicin methyltransferase BamL in complex with triazolic desmethylPZN analog and SAH
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, SULFATE ION, ethyl 2-(2-{2-[(1S)-1-amino-4-carbamimidamidobutyl]-1,3-thiazol-4-yl}-5-methyl-1,3-oxazol-4-yl)-1,3-thiazole-4-carboxylate, ...
Authors:Hao, Y, Nair, S.K.
Deposit date:2015-09-07
Release date:2015-09-23
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Insights into methyltransferase specificity and bioactivity of derivatives of the antibiotic plantazolicin.
Acs Chem.Biol., 10, 2015
6E6T
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BU of 6e6t by Molmil
Dieckmann cyclase, NcmC, bound to cerulenin
Descriptor: (4S,5R)-4,5-dihydroxy-5-[(3E,6E)-octa-3,6-dien-1-yl]pyrrolidin-2-one, NcmC, SULFATE ION
Authors:Cogan, D.P, Nair, S.K.
Deposit date:2018-07-25
Release date:2019-07-31
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural Basis for Enzymatic Off-Loading of Hybrid Polyketides by Dieckmann Condensation.
Acs Chem.Biol., 2020
6E6U
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BU of 6e6u by Molmil
Variant C89S of Dieckmann cyclase, NcmC
Descriptor: Dieckmann cyclase, NcmC, SULFATE ION
Authors:Cogan, D.P, Nair, S.K.
Deposit date:2018-07-25
Release date:2019-07-31
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural Basis for Enzymatic Off-Loading of Hybrid Polyketides by Dieckmann Condensation.
Acs Chem.Biol., 2020
5DZT
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BU of 5dzt by Molmil
Crystal structure of class II lanthipeptide synthetase CylM in complex with AMP
Descriptor: ADENOSINE MONOPHOSPHATE, CylM, ZINC ION
Authors:Dong, S.H, Lukk, T, Nair, S.K.
Deposit date:2015-09-26
Release date:2015-10-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The enterococcal cytolysin synthetase has an unanticipated lipid kinase fold.
Elife, 4, 2015
5DM4
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BU of 5dm4 by Molmil
Crystal structure of the plantazolicin methyltransferase BpumL in complex with pentazolic desmethylPZN analog and SAH
Descriptor: 1-[(4S)-4-(4-{4-[4-(5,5'-dimethyl-2,4'-bi-1,3-oxazol-2'-yl)-1,3-thiazol-2-yl]-5-methyl-1,3-oxazol-2-yl}-1,3-thiazol-2-yl)-4-(methylamino)butyl]guanidine, GLYCEROL, Methyltransferase domain family, ...
Authors:Hao, Y, Nair, S.K.
Deposit date:2015-09-07
Release date:2015-09-23
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Insights into methyltransferase specificity and bioactivity of derivatives of the antibiotic plantazolicin.
Acs Chem.Biol., 10, 2015
5DM2
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BU of 5dm2 by Molmil
Crystal structure of the plantazolicin methyltransferase BpumL in complex with triazolic desmethylPZN analog and SAH
Descriptor: GLYCEROL, Methyltransferase domain family, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Hao, Y, Nair, S.K.
Deposit date:2015-09-07
Release date:2015-09-23
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Insights into methyltransferase specificity and bioactivity of derivatives of the antibiotic plantazolicin.
Acs Chem.Biol., 10, 2015
6EC7
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BU of 6ec7 by Molmil
Glutamylation domain, TbtB, from thiomuracin biosynthesis
Descriptor: Lantibiotic dehydratase domain protein
Authors:Cogan, D.P, Nair, S.K.
Deposit date:2018-08-07
Release date:2019-08-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Characterization of glutamyl-tRNA-dependent dehydratases using nonreactive substrate mimics.
Proc.Natl.Acad.Sci.USA, 116, 2019
6EC8
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BU of 6ec8 by Molmil
Glutamylation domain, TbtB, from thiomuracin biosynthesis bound to 5'-phosphodesmethylglutamycin
Descriptor: 3'-deoxy-3'-[(L-alpha-glutamyl)amino]adenosine 5'-(dihydrogen phosphate), Lantibiotic dehydratase domain protein
Authors:Cogan, D.P, Nair, S.K.
Deposit date:2018-08-07
Release date:2019-06-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.148 Å)
Cite:Characterization of glutamyl-tRNA-dependent dehydratases using nonreactive substrate mimics.
Proc.Natl.Acad.Sci.USA, 116, 2019
8UZD
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BU of 8uzd by Molmil
The structure of IpCS3, a theobromine methyltransferase from Yerba Mate
Descriptor: CAFFEINE, IpCS3, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Hernandez Garcia, A, Nair, S.K.
Deposit date:2023-11-14
Release date:2024-01-10
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.721 Å)
Cite:Yerba mate (Ilex paraguariensis) genome provides new insights into convergent evolution of caffeine biosynthesis
To Be Published
5EHK
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BU of 5ehk by Molmil
Crystal structure of tRNA dependent lantibiotic dehydratase MibB from Microbispora sp. 107891
Descriptor: Lantibiotic dehydratase
Authors:Hao, Y, Nair, S.K.
Deposit date:2015-10-28
Release date:2016-03-02
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.708 Å)
Cite:Structure and tRNA Specificity of MibB, a Lantibiotic Dehydratase from Actinobacteria Involved in NAI-107 Biosynthesis.
Cell Chem Biol, 23, 2016
6WP7
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BU of 6wp7 by Molmil
Avenolide Binding Autoregulator AvaR1
Descriptor: AvaR1
Authors:Kapoor, I, Olivares, P.J, Nair, S.K.
Deposit date:2020-04-26
Release date:2020-06-24
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Biochemical basis for the regulation of biosynthesis of antiparasitics by bacterial hormones.
Elife, 9, 2020
6M7Y
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BU of 6m7y by Molmil
Dehydratase, NisB, bound to a non-eliminable substrate analog
Descriptor: Lantibiotic, Nisin biosynthesis protein NisB
Authors:Cogan, D.P, Nair, S.K.
Deposit date:2018-08-21
Release date:2019-08-14
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.794 Å)
Cite:Characterization of glutamyl-tRNA-dependent dehydratases using nonreactive substrate mimics.
Proc.Natl.Acad.Sci.USA, 116, 2019
3UQ7
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BU of 3uq7 by Molmil
X-ray structure of a pentameric ligand gated ion channel from Erwinia chrysanthemi (ELIC) mutant L240S F247L (L9S F16L) in presence of 10 mM cysteamine
Descriptor: Gamma-aminobutyric-acid receptor subunit beta-1
Authors:Gonzalez-Gutierrez, G, Lukk, T, Agarwal, V, Papke, D, Nair, S.K, Grosman, C.
Deposit date:2011-11-19
Release date:2012-04-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Mutations that stabilize the open state of the Erwinia chrisanthemi ligand-gated ion channel fail to change the conformation of the pore domain in crystals.
Proc.Natl.Acad.Sci.USA, 109, 2012
2ZEX
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BU of 2zex by Molmil
Family 16 carbohydrate binding module
Descriptor: CALCIUM ION, S-layer associated multidomain endoglucanase, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
Authors:Bae, B, Nair, S.K.
Deposit date:2007-12-18
Release date:2008-03-04
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Molecular Basis for the Selectivity and Specificity of Ligand Recognition by the Family 16 Carbohydrate-binding Modules from Thermoanaerobacterium polysaccharolyticum ManA
J.Biol.Chem., 283, 2008
2ZEZ
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BU of 2zez by Molmil
Family 16 Carbohydrate Binding Module-2
Descriptor: CALCIUM ION, S-layer associated multidomain endoglucanase
Authors:Bae, B, Nair, S.K.
Deposit date:2007-12-18
Release date:2008-03-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Molecular Basis for the Selectivity and Specificity of Ligand Recognition by the Family 16 Carbohydrate-binding Modules from Thermoanaerobacterium polysaccharolyticum ManA
J.Biol.Chem., 283, 2008
8T19
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BU of 8t19 by Molmil
RiPP precursor peptide recognition element (RRE) domain of Ocin-ThiF-like partner protein, PbtF, bound to an 8 residue fragment of its precursor peptide, PbtA
Descriptor: MAGNESIUM ION, PbtA, PbtF
Authors:Cogan, D.P, Nair, S.K, Mitchell, D.A.
Deposit date:2023-06-02
Release date:2024-06-12
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:Discovery and validation of RRE domains
To Be Published
2ZEW
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BU of 2zew by Molmil
Family 16 Cabohydrate Binding Domain Module 1
Descriptor: CALCIUM ION, S-layer associated multidomain endoglucanase
Authors:Bae, B, Nair, S.K.
Deposit date:2007-12-18
Release date:2008-03-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Molecular Basis for the Selectivity and Specificity of Ligand Recognition by the Family 16 Carbohydrate-binding Modules from Thermoanaerobacterium polysaccharolyticum ManA
J.Biol.Chem., 283, 2008
4E5N
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BU of 4e5n by Molmil
Thermostable phosphite dehydrogenase in complex with NAD
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Thermostable phosphite dehydrogenase
Authors:Zou, Y, Zhang, H, Nair, S.K.
Deposit date:2012-03-14
Release date:2012-05-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structures of phosphite dehydrogenase provide insights into nicotinamide cofactor regeneration.
Biochemistry, 51, 2012
3CHH
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BU of 3chh by Molmil
Crystal Structure of Di-iron AurF
Descriptor: MU-OXO-DIIRON, p-Aminobenzoate N-Oxygenase
Authors:Zhang, H, Brunzelle, J.S, Nair, S.K.
Deposit date:2008-03-09
Release date:2008-05-27
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:In vitro reconstitution and crystal structure of p-aminobenzoate N-oxygenase (AurF) involved in aureothin biosynthesis.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3CHI
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BU of 3chi by Molmil
Crystal Structure of Di-iron AurF (Monoclinic form)
Descriptor: MU-OXO-DIIRON, p-Aminobenzoate N-Oxygenase
Authors:Zhang, H, Brunzelle, J.S, Nair, S.K.
Deposit date:2008-03-09
Release date:2008-05-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:In vitro reconstitution and crystal structure of p-aminobenzoate N-oxygenase (AurF) involved in aureothin biosynthesis.
Proc.Natl.Acad.Sci.Usa, 105, 2008
4E5P
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BU of 4e5p by Molmil
Thermostable phosphite dehydrogenase A176R variant in complex with NAD
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Thermostable phosphite dehydrogenase A176R variant
Authors:Zou, Y, Zhang, H, Nair, S.K.
Deposit date:2012-03-14
Release date:2012-05-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of phosphite dehydrogenase provide insights into nicotinamide cofactor regeneration.
Biochemistry, 51, 2012
4E5K
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BU of 4e5k by Molmil
Thermostable phosphite dehydrogenase in complex with NAD and sulfite
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Phosphite dehydrogenase (thermostable variant), SULFITE ION
Authors:Zou, Y, Zhang, H, Nair, S.K.
Deposit date:2012-03-14
Release date:2012-05-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structures of phosphite dehydrogenase provide insights into nicotinamide cofactor regeneration.
Biochemistry, 51, 2012
4E5M
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BU of 4e5m by Molmil
Thermostable phosphite dehydrogenase E175A/A176R in complex with NADP
Descriptor: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Thermostable phosphite dehydrogenase
Authors:Zou, Y, Zhang, H, Nair, S.K.
Deposit date:2012-03-14
Release date:2012-05-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structures of phosphite dehydrogenase provide insights into nicotinamide cofactor regeneration.
Biochemistry, 51, 2012

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