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PDB: 282 件
5W8G
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The structure of a COA-dependent acyl-homoserine lactone synthase, BjaI, with SAH
分子名称: Autoinducer synthase, S-ADENOSYL-L-HOMOCYSTEINE, SULFATE ION
著者Dong, S.-H, Nair, S.K.
登録日2017-06-21
公開日2017-08-23
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Molecular basis for the substrate specificity of quorum signal synthases.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
4ETX
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Crystal Structure of PelD 158-CT from Pseudomonas aeruginosa PAO1
分子名称: PelD
著者Li, Z, Chen, J, Nair, S.K.
登録日2012-04-24
公開日2012-07-25
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structures of the PelD Cyclic Diguanylate Effector Involved in Pellicle Formation in Pseudomonas aeruginosa PAO1.
J.Biol.Chem., 287, 2012
4EUV
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Crystal Structure of PelD 158-CT from Pseudomonas aeruginosa PAO1, in complex with c-di-GMP, form 1
分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), PelD
著者Li, Z, Chen, J, Nair, S.K.
登録日2012-04-25
公開日2012-07-25
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structures of the PelD Cyclic Diguanylate Effector Involved in Pellicle Formation in Pseudomonas aeruginosa PAO1.
J.Biol.Chem., 287, 2012
5UAO
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Crystal structure of MibH, a lathipeptide tryptophan 5-halogenase
分子名称: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, Tryptophane-5-halogenase
著者Cogan, D.P, Nair, S.K.
登録日2016-12-19
公開日2017-01-25
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Two Flavoenzymes Catalyze the Post-Translational Generation of 5-Chlorotryptophan and 2-Aminovinyl-Cysteine during NAI-107 Biosynthesis.
ACS Chem. Biol., 12, 2017
5W8D
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The structure of a COA-dependent acyl-homoserine lactone synthase, BjaI, with MTA
分子名称: 5'-DEOXY-5'-METHYLTHIOADENOSINE, Autoinducer synthase, GLYCEROL
著者Dong, S.-H, Nair, S.K.
登録日2017-06-21
公開日2017-08-23
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Molecular basis for the substrate specificity of quorum signal synthases.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5UY9
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Prolyl isomerase Pin1 R14A mutant bound with Brd4 peptide
分子名称: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, Brd4 peptide, Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1, ...
著者Dong, S.-H, Nair, S.
登録日2017-02-23
公開日2017-04-26
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Prolyl isomerase PIN1 regulates the stability, transcriptional activity and oncogenic potential of BRD4.
Oncogene, 36, 2017
5W8E
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The structure of a CoA-dependent acyl-homoserine lactone synthase, BjaI, with the adduct of SAH and IV-CoA
分子名称: (2S)-4-({[(2S,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl}sulfanyl)-2-[(3-methylbutanoyl)amino]butanoic acid, ADENINE, Autoinducer synthase, ...
著者Dong, S.-H, Nair, S.K.
登録日2017-06-21
公開日2017-08-23
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Molecular basis for the substrate specificity of quorum signal synthases.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5TVA
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A. aeolicus BioW with AMP and CoA
分子名称: 6-carboxyhexanoate--CoA ligase, ADENOSINE MONOPHOSPHATE, COENZYME A
著者Estrada, P, Manandhar, M, Dong, S.-H, Deveryshetty, J, Agarwal, V, Cronan, J.E, Nair, S.K.
登録日2016-11-08
公開日2016-12-07
最終更新日2017-05-31
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献The pimeloyl-CoA synthetase BioW defines a new fold for adenylate-forming enzymes.
Nat. Chem. Biol., 13, 2017
5TU6
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PagF prenyltransferase with cyclic[INPYLYP] and DMSPP
分子名称: DIMETHYLALLYL S-THIOLODIPHOSPHATE, MAGNESIUM ION, METHIONINE, ...
著者Hao, Y, Nair, S.K.
登録日2016-11-04
公開日2016-11-30
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.22 Å)
主引用文献Molecular basis for the broad substrate selectivity of a peptide prenyltransferase.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5TU4
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PagF with Boc-Tyr and DMSPP
分子名称: DIMETHYLALLYL S-THIOLODIPHOSPHATE, MAGNESIUM ION, N-(tert-butoxycarbonyl)-L-tyrosine, ...
著者Hao, Y, Nair, S.K.
登録日2016-11-04
公開日2016-11-30
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Molecular basis for the broad substrate selectivity of a peptide prenyltransferase.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5U57
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Psf4 in complex with Fe2+ and (S)-2-HPP
分子名称: (S)-2-HYDROXYPROPYLPHOSPHONIC ACID, (S)-2-hydroxypropylphosphonic acid epoxidase, FE (III) ION
著者Chekan, J.R, Nair, S.K.
登録日2016-12-06
公開日2017-01-04
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.73 Å)
主引用文献Characterization of Two Late-Stage Enzymes Involved in Fosfomycin Biosynthesis in Pseudomonads.
ACS Chem. Biol., 12, 2017
6C0G
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Lysinoalanine synthase, DurN, from duramycin biosynthesis
分子名称: Lysinoalanine synthase, POTASSIUM ION
著者Cogan, D.P, Nair, S.K.
登録日2017-12-31
公開日2018-09-05
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.145 Å)
主引用文献Substrate-assisted enzymatic formation of lysinoalanine in duramycin.
Nat. Chem. Biol., 14, 2018
6C0H
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Lysinoalanine synthase, DurN, from duramycin biosynthesis bound to 1-Dha6Ala
分子名称: GLN-DAL-CYS-ALA-PHE-GLY-PRO-PHE-DBB-PHE-VAL-CYS-BH2-GLY, Lysinoalanine synthase, POTASSIUM ION
著者Cogan, D.P, Nair, S.K.
登録日2017-12-31
公開日2018-09-05
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Substrate-assisted enzymatic formation of lysinoalanine in duramycin.
Nat. Chem. Biol., 14, 2018
5U55
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Psf4 in complex with Mn2+ and (S)-2-HPP
分子名称: (S)-2-HYDROXYPROPYLPHOSPHONIC ACID, (S)-2-hydroxypropylphosphonic acid epoxidase, MANGANESE (II) ION
著者Chekan, J.R, Nair, S.K.
登録日2016-12-06
公開日2017-01-04
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Characterization of Two Late-Stage Enzymes Involved in Fosfomycin Biosynthesis in Pseudomonads.
ACS Chem. Biol., 12, 2017
5TU5
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BU of 5tu5 by Molmil
PagF prenyltransferase with Tyr-Tyr-Tyr and DMSPP
分子名称: DIMETHYLALLYL S-THIOLODIPHOSPHATE, MAGNESIUM ION, PagF prenyltransferase, ...
著者Hao, Y, Nair, S.K.
登録日2016-11-04
公開日2016-11-30
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Molecular basis for the broad substrate selectivity of a peptide prenyltransferase.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5UW5
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PCY1 H695A Variant in Complex with Follower Peptide
分子名称: CACODYLATE ION, CALCIUM ION, Peptide cyclase 1, ...
著者Chekan, J.R, Nair, S.K.
登録日2017-02-20
公開日2017-05-31
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.94 Å)
主引用文献Characterization of the macrocyclase involved in the biosynthesis of RiPP cyclic peptides in plants.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5UW7
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PCY1 Y481F Variant in Complex with Follower Peptide
分子名称: MAGNESIUM ION, Peptide cyclase 1, Presegetalin A1
著者Chekan, J.R, Nair, S.K.
登録日2017-02-20
公開日2017-05-31
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.37 Å)
主引用文献Characterization of the macrocyclase involved in the biosynthesis of RiPP cyclic peptides in plants.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5UW6
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PCY1 in Complex with Follower Peptide and Covalent Inhibitor ZPP
分子名称: CALCIUM ION, N-BENZYLOXYCARBONYL-L-PROLYL-L-PROLINAL, Peptide cyclase 1, ...
著者Chekan, J.R, Nair, S.K.
登録日2017-02-20
公開日2017-05-31
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Characterization of the macrocyclase involved in the biosynthesis of RiPP cyclic peptides in plants.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5UW3
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BU of 5uw3 by Molmil
PCY1 in Complex with Follower Peptide
分子名称: CACODYLATE ION, Peptide cyclase 1, Presegetalin A1
著者Chekan, J.R, Nair, S.K.
登録日2017-02-20
公開日2017-05-31
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Characterization of the macrocyclase involved in the biosynthesis of RiPP cyclic peptides in plants.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5UZW
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PCY1 G696Insertion Variant in Complex with Follower Peptide and the Covalent Inhibitor ZPP
分子名称: CALCIUM ION, N-BENZYLOXYCARBONYL-L-PROLYL-L-PROLINAL, Peptide cyclase 1, ...
著者Chekan, J.R, Nair, S.K.
登録日2017-02-27
公開日2017-05-31
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.82 Å)
主引用文献Characterization of the macrocyclase involved in the biosynthesis of RiPP cyclic peptides in plants.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5TV5
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BioW from Aquifex aeoulicus
分子名称: 6-carboxyhexanoate--CoA ligase
著者Estrada, P, Manandhar, M, Dong, S.-H, Deveryshetty, J, Agarwal, V, Cronan, J.E, Nair, S.K.
登録日2016-11-08
公開日2016-12-07
最終更新日2017-05-31
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The pimeloyl-CoA synthetase BioW defines a new fold for adenylate-forming enzymes.
Nat. Chem. Biol., 13, 2017
5TV8
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A. aeolicus BioW with AMP-CPP and pimelate
分子名称: 6-carboxyhexanoate--CoA ligase, DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, MAGNESIUM ION, ...
著者Estrada, P, Manandhar, M, Dong, S.-H, Deveryshetty, J, Agarwal, V, Cronan, J.E, Nair, S.K.
登録日2016-11-08
公開日2016-12-07
最終更新日2017-05-31
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献The pimeloyl-CoA synthetase BioW defines a new fold for adenylate-forming enzymes.
Nat. Chem. Biol., 13, 2017
5W99
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Pyridine synthase, PbtD, from GE2270 biosynthesis bound to TSP
分子名称: 2,2'-(6-(2'-(aminomethyl)-[2,4'-bithiazol]-4-yl)pyridine-2,5-diyl)bis(thiazole-4-carboxylic acid), PbtD, SULFATE ION
著者Cogan, D.P, Nair, S.K.
登録日2017-06-22
公開日2017-11-22
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Structural insights into enzymatic [4+2] aza-cycloaddition in thiopeptide antibiotic biosynthesis.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5TV6
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A. aeolicus BioW with pimelate
分子名称: 6-carboxyhexanoate--CoA ligase, PIMELIC ACID
著者Estrada, P, Manandhar, M, Dong, S.-H, Deveryshetty, J, Agarwal, V, Cronan, J.E, Nair, S.K.
登録日2016-11-08
公開日2016-12-07
最終更新日2017-05-31
実験手法X-RAY DIFFRACTION (2.456 Å)
主引用文献The pimeloyl-CoA synthetase BioW defines a new fold for adenylate-forming enzymes.
Nat. Chem. Biol., 13, 2017
5W98
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Pyridine synthase, PbtD, from GE2270 biosynthesis
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, PbtD
著者Cogan, D.P, Nair, S.K.
登録日2017-06-22
公開日2017-11-22
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.23 Å)
主引用文献Structural insights into enzymatic [4+2] aza-cycloaddition in thiopeptide antibiotic biosynthesis.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017

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