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PDB: 282 件

6D6P
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BU of 6d6p by Molmil
The structure of ligand binding domain of LasR in complex with TP-1 homolog, compound 19
分子名称: N-{[3,5-dibromo-2-(methoxymethoxy)phenyl]methyl}-2-nitrobenzamide, Transcriptional activator protein LasR
著者Dong, S.H, Nair, S.K.
登録日2018-04-21
公開日2018-08-08
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural and Biochemical Studies of Non-native Agonists of the LasR Quorum-Sensing Receptor Reveal an L3 Loop "Out" Conformation for LasR.
Cell Chem Biol, 25, 2018
6D6L
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BU of 6d6l by Molmil
The structure of ligand binding domain of LasR in complex with TP-1 homolog, compound 14
分子名称: 2,4-dibromo-6-{[(2-nitrobenzene-1-carbonyl)amino]methyl}phenyl 4-chlorobenzoate, Transcriptional activator protein LasR
著者Dong, S.H, Nair, S.K.
登録日2018-04-21
公開日2018-08-08
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Structural and Biochemical Studies of Non-native Agonists of the LasR Quorum-Sensing Receptor Reveal an L3 Loop "Out" Conformation for LasR.
Cell Chem Biol, 25, 2018
5BSW
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BU of 5bsw by Molmil
Crystal structure of 4-coumarate:CoA ligase delta-V341 mutant complexed with feruloyl adenylate
分子名称: 4-coumarate--CoA ligase 2, 5'-O-[(R)-hydroxy{[(2E)-3-(5-methoxy-4-oxocyclohexa-1,5-dien-1-yl)prop-2-enoyl]oxy}phosphoryl]adenosine
著者Li, Z, Nair, S.K.
登録日2015-06-02
公開日2016-05-11
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural Basis for Specificity and Flexibility in a Plant 4-Coumarate:CoA Ligase.
Structure, 23, 2015
6D6N
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BU of 6d6n by Molmil
The structure of ligand binding domain of LasR in complex with TP-1 homolog, compound 16
分子名称: 2,4-dibromo-6-{[(2-nitrobenzene-1-carbonyl)amino]methyl}phenyl 4-methoxybenzoate, PHENYLALANINE, Transcriptional activator protein LasR
著者Dong, S.H, Nair, S.K.
登録日2018-04-21
公開日2018-08-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Structural and Biochemical Studies of Non-native Agonists of the LasR Quorum-Sensing Receptor Reveal an L3 Loop "Out" Conformation for LasR.
Cell Chem Biol, 25, 2018
6D6M
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BU of 6d6m by Molmil
The structure of ligand binding domain of LasR in complex with TP-1 homolog, compound 15
分子名称: 2,4-dibromo-6-{[(2-nitrobenzene-1-carbonyl)amino]methyl}phenyl 4-bromobenzoate, Transcriptional activator protein LasR
著者Dong, S.H, Nair, S.K.
登録日2018-04-21
公開日2018-08-08
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural and Biochemical Studies of Non-native Agonists of the LasR Quorum-Sensing Receptor Reveal an L3 Loop "Out" Conformation for LasR.
Cell Chem Biol, 25, 2018
5BSM
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BU of 5bsm by Molmil
Crystal structure of 4-coumarate:CoA ligase complexed with magnesium and Adenosine triphosphate
分子名称: 4-coumarate--CoA ligase 2, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION
著者Li, Z, Nair, S.K.
登録日2015-06-02
公開日2016-05-11
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献Structural Basis for Specificity and Flexibility in a Plant 4-Coumarate:CoA Ligase.
Structure, 23, 2015
6C28
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BU of 6c28 by Molmil
Transcriptional repressor, CouR, bound to p-coumaroyl-CoA
分子名称: Transcriptional regulator, MarR family, p-coumaroyl-CoA
著者Cogan, D.P, Nair, S.K.
登録日2018-01-07
公開日2018-05-30
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Structural basis of transcriptional regulation by CouR, a repressor of coumarate catabolism, inRhodopseudomonas palustris.
J. Biol. Chem., 293, 2018
6C8S
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BU of 6c8s by Molmil
Loganic acid methyltransferase with SAH
分子名称: Loganic acid O-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
著者Petronikolou, N, Nair, S.K.
登録日2018-01-25
公開日2018-02-21
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Loganic Acid Methyltransferase: Insights into the Specificity of Methylation on an Iridoid Glycoside.
Chembiochem, 19, 2018
6C8R
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Loganic acid O-methyltransferase complexed with SAH and loganic acid
分子名称: Loganic acid, Loganic acid O-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
著者Petronikolou, N, Nair, S.K.
登録日2018-01-25
公開日2018-02-07
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.951 Å)
主引用文献Loganic Acid Methyltransferase: Insights into the Specificity of Methylation on an Iridoid Glycoside.
Chembiochem, 19, 2018
6CGQ
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BU of 6cgq by Molmil
Threonine synthase from Bacillus subtilis ATCC 6633 with PLP and PLP-Ala
分子名称: (E)-N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)-L-alanine, PHOSPHATE ION, PYRIDOXAL-5'-PHOSPHATE, ...
著者Petronikolou, N, Nair, S.K.
登録日2018-02-20
公開日2019-02-27
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.019 Å)
主引用文献Molecular Basis of Bacillus subtilis ATCC 6633 Self-Resistance to the Phosphono-oligopeptide Antibiotic Rhizocticin.
ACS Chem. Biol., 14, 2019
6C9T
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BU of 6c9t by Molmil
Transcriptional repressor, CouR
分子名称: CouR
著者Cogan, D.P, Nair, S.K.
登録日2018-01-28
公開日2018-05-30
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Structural basis of transcriptional regulation by CouR, a repressor of coumarate catabolism, inRhodopseudomonas palustris.
J. Biol. Chem., 293, 2018
6C2S
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BU of 6c2s by Molmil
Transcriptional repressor, CouR, bound to a 23-mer DNA duplex
分子名称: 23-mer, Transcriptional regulator, MarR family
著者Cogan, D.P, Nair, S.K.
登録日2018-01-08
公開日2018-05-30
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Structural basis of transcriptional regulation by CouR, a repressor of coumarate catabolism, inRhodopseudomonas palustris.
J. Biol. Chem., 293, 2018
4INE
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BU of 4ine by Molmil
Crystal structure of N-methyl transferase (PMT-2) from Caenorhabditis elegant complexed with S-adenosyl homocysteine and phosphoethanolamine
分子名称: BETA-MERCAPTOETHANOL, PHOSPHORIC ACID MONO-(2-AMINO-ETHYL) ESTER, Protein PMT-2, ...
著者Lukk, T, Nair, S.K.
登録日2013-01-04
公開日2014-01-15
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Crystal structure of N-methyl transferase (PMT-2) from Caenorhabditis elegant complexed with S-adenosyl homocysteine and phosphoethanolamine
To be Published
5BST
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BU of 5bst by Molmil
Crystal structure of 4-coumarate:CoA ligase complexed with coumaroyl adenylate
分子名称: 4-coumarate--CoA ligase 2, 5'-O-[(R)-hydroxy{[(2E)-3-(4-oxocyclohexa-1,5-dien-1-yl)prop-2-enoyl]oxy}phosphoryl]adenosine, MAGNESIUM ION
著者Li, Z, Nair, S.K.
登録日2015-06-02
公開日2016-05-11
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献Structural Basis for Specificity and Flexibility in a Plant 4-Coumarate:CoA Ligase.
Structure, 23, 2015
5BSU
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BU of 5bsu by Molmil
Crystal structure of 4-coumarate:CoA ligase complexed with caffeoyl adenylate
分子名称: 4-coumarate--CoA ligase 2, 5'-O-[(R)-{[(2E)-3-(3,4-dioxocyclohexa-1,5-dien-1-yl)prop-2-enoyl]oxy}(hydroxy)phosphoryl]adenosine, GLYCEROL, ...
著者Li, Z, Nair, S.K.
登録日2015-06-02
公開日2016-05-11
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural Basis for Specificity and Flexibility in a Plant 4-Coumarate:CoA Ligase.
Structure, 23, 2015
4GYP
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BU of 4gyp by Molmil
Crystal structure of the heterotetrameric complex of GlucD and GlucDRP from E. coli K-12 MG1655 (EFI TARGET EFI-506058)
分子名称: CITRIC ACID, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Lukk, T, Ghasempur, S, Imker, H.J, Gerlt, J.A, Nair, S.K, Enzyme Function Initiative (EFI)
登録日2012-09-05
公開日2012-09-12
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Glucarate dehydratase and its related protein from Escherichia coli form a heterotetrameric complex.
to be published
6C0Y
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BU of 6c0y by Molmil
Lysinoalanine synthase, DurN, from duramycin biosynthesis bound to duramycin
分子名称: CYS-LYS-GLN-DAL-CYS-ALA-PHE-GLY-PRO-PHE-DBB-PHE-VAL-CYS-BH2-GLY-ASN-DBB-LYS, Lysinoalanine synthase, POTASSIUM ION
著者Cogan, D.P, Nair, S.K.
登録日2018-01-03
公開日2018-09-05
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Substrate-assisted enzymatic formation of lysinoalanine in duramycin.
Nat. Chem. Biol., 14, 2018
4GT2
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BU of 4gt2 by Molmil
Crystal structure of DyP-type peroxidase (SCO3963) from Streptomyces coelicolor
分子名称: ACETATE ION, GLYCEROL, OXYGEN MOLECULE, ...
著者Lukk, T, Hetta, A.M.A, Jones, A, Solbiati, J, Majumdar, S, Cronan, J.E, Gerlt, J.A, Nair, S.K.
登録日2012-08-28
公開日2013-09-11
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献DyP-type peroxidases from Stretptomyces and Thermobifida can modify organosolv lignin.
To be Published
4IL0
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BU of 4il0 by Molmil
Crystal structure of GlucDRP from E. coli K-12 MG1655 (EFI target EFI-506058)
分子名称: CITRIC ACID, GLYCEROL, Glucarate dehydratase-related protein
著者Lukk, T, Ghasempur, S, Imker, H.J, Gerlt, J.A, Nair, S.K, Enzyme Function Initiative (EFI)
登録日2012-12-28
公開日2013-01-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Glucarate dehydratase and its related protein from Escherichia coli form a heterotetrameric complex.
to be published
4MGQ
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BU of 4mgq by Molmil
PbXyn10C CBM APO
分子名称: CALCIUM ION, Glycosyl hydrolase family 10
著者Chekan, J.R, Nair, S.K.
登録日2013-08-28
公開日2014-08-20
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献Xylan utilization in human gut commensal bacteria is orchestrated by unique modular organization of polysaccharide-degrading enzymes.
Proc.Natl.Acad.Sci.USA, 111, 2014
4K8G
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BU of 4k8g by Molmil
Crystal structure of D-Mannonate dehydratase from Novosphingobium aromaticivorans mutant (V161A, R163A, K165G, L166A, Y167G, Y168A, E169G)
分子名称: GLYCEROL, MAGNESIUM ION, Mandelate racemase/muconate lactonizing enzyme, ...
著者Lukk, T, Wichelecki, D, Gerlt, J.A, Nair, S.K.
登録日2013-04-18
公開日2013-05-22
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Crystal structure of D-Mannonate dehydratase from Novosphingobium aromaticivorans mutant (V161A, R163A, K165G, L166A, Y167G, Y168A, E169G)
To be Published
4MGS
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BU of 4mgs by Molmil
BiXyn10A CBM1 APO
分子名称: Putative glycosyl hydrolase family 10
著者Chekan, J.R, Nair, S.K.
登録日2013-08-28
公開日2014-08-20
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Xylan utilization in human gut commensal bacteria is orchestrated by unique modular organization of polysaccharide-degrading enzymes.
Proc.Natl.Acad.Sci.USA, 111, 2014
4GLP
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BU of 4glp by Molmil
The crystal structure of soluble human CD14 reveals a bent solenoid with a hydrophobic amino-terminal pocket.
分子名称: Monocyte differentiation antigen CD14
著者Kelley, S.L, Lukk, T, Nair, S.K, Tapping, R.I.
登録日2012-08-14
公開日2012-12-26
最終更新日2021-05-26
実験手法X-RAY DIFFRACTION (4.002 Å)
主引用文献The Crystal Structure of Human Soluble CD14 Reveals a Bent Solenoid with a Hydrophobic Amino-Terminal Pocket.
J.Immunol., 190, 2013
4GRC
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BU of 4grc by Molmil
Crystal structure of DyP-type peroxidase (SCO2276) from Streptomyces coelicolor
分子名称: CALCIUM ION, HYDROGEN PEROXIDE, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Lukk, T, Hetta, A.M.A, Jones, A, Solbiati, J, Majumdar, S, Cronan, J.E, Gerlt, J.A, Nair, S.K.
登録日2012-08-24
公開日2013-09-04
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献DyP-type peroxidases from Stretptomyces and Thermobifida can modify organosolv lignin.
To be Published
4GU7
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BU of 4gu7 by Molmil
Crystal structure of DyP-type peroxidase (SCO7193) from Streptomyces coelicolor
分子名称: NICKEL (II) ION, PROTOPORPHYRIN IX CONTAINING FE, Putative uncharacterized protein SCO7193
著者Lukk, T, Hetta, A.M.A, Jones, A, Solbiati, J, Majumdar, S, Cronan, J.E, Gerlt, J.A, Nair, S.K.
登録日2012-08-29
公開日2013-09-11
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献DyP-type peroxidases from Stretptomyces and Thermobifida can modify organosolv lignin.
To be Published

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件を2024-06-12に公開中

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