5YUY
 
 | | DNA polymerase IV - DNA ternary complex 9 | | 分子名称: | DIPHOSPHATE, DNA polymerase IV, DTN, ... | | 著者 | Kottur, J, Nair, D.T. | | 登録日 | 2017-11-23 | | 公開日 | 2018-10-17 | | 最終更新日 | 2023-11-22 | | 実験手法 | X-RAY DIFFRACTION (1.74 Å) | | 主引用文献 | Pyrophosphate hydrolysis is an intrinsic and critical step of the DNA synthesis reaction
Nucleic Acids Res., 46, 2018
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5YUR
 | | DNA polymerase IV - DNA ternary complex 1 | | 分子名称: | DNA polymerase IV, DTN, SODIUM ION, ... | | 著者 | Kottur, J, Nair, D.T. | | 登録日 | 2017-11-23 | | 公開日 | 2018-08-29 | | 最終更新日 | 2023-11-22 | | 実験手法 | X-RAY DIFFRACTION (2.035 Å) | | 主引用文献 | Pyrophosphate hydrolysis is an intrinsic and critical step of the DNA synthesis reaction
Nucleic Acids Res., 46, 2018
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5YUT
 | | DNA polymerase IV - DNA ternary complex 3 | | 分子名称: | DNA polymerase IV, DTN, MAGNESIUM ION, ... | | 著者 | Kottur, J, Nair, D.T. | | 登録日 | 2017-11-23 | | 公開日 | 2018-09-05 | | 最終更新日 | 2023-11-22 | | 実験手法 | X-RAY DIFFRACTION (2.15 Å) | | 主引用文献 | Pyrophosphate hydrolysis is an intrinsic and critical step of the DNA synthesis reaction
Nucleic Acids Res., 46, 2018
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5YUZ
 | | DNA polymerase IV - DNA ternary complex 11 | | 分子名称: | DIPHOSPHATE, DNA polymerase IV, DTN1, ... | | 著者 | Kottur, J, Nair, D.T. | | 登録日 | 2017-11-23 | | 公開日 | 2018-11-14 | | 最終更新日 | 2023-11-22 | | 実験手法 | X-RAY DIFFRACTION (1.83 Å) | | 主引用文献 | Pyrophosphate hydrolysis is an intrinsic and critical step of the DNA synthesis reaction.
Nucleic Acids Res., 46, 2018
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5YUU
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5YUS
 | | DNA polymerase IV - DNA ternary complex 2 | | 分子名称: | DNA polymerase IV, DTN, MAGNESIUM ION, ... | | 著者 | Kottur, J, Nair, D.T. | | 登録日 | 2017-11-23 | | 公開日 | 2018-11-07 | | 最終更新日 | 2024-03-27 | | 実験手法 | X-RAY DIFFRACTION (1.94 Å) | | 主引用文献 | Pyrophosphate hydrolysis is an intrinsic and critical step of the DNA synthesis reaction
Nucleic Acids Res., 46, 2018
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5YUV
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4IR1
 | | Polymerase-DNA Complex | | 分子名称: | 5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]thymidine, DNA (5'-D(*CP*TP*AP*GP*GP*GP*TP*CP*CP*TP*AP*GP*GP*AP*CP*CP*C)-3'), DNA (5'-D(*GP*GP*GP*TP*CP*CP*TP*AP*GP*GP*AP*CP*CP*C)-3'), ... | | 著者 | Sharma, A, Nair, D.T. | | 登録日 | 2013-01-14 | | 公開日 | 2013-04-10 | | 最終更新日 | 2024-02-28 | | 実験手法 | X-RAY DIFFRACTION (2.38 Å) | | 主引用文献 | A strategically located serine residue is critical for the mutator activity of DNA polymerase IV from Escherichia coli.
Nucleic Acids Res., 41, 2013
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4IR9
 | | Polymerase-DNA complex | | 分子名称: | 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]guanosine, DNA (5'-D(P*CP*TP*AP*GP*GP*GP*TP*CP*CP*TP*AP*GP*GP*AP*CP*CP*C)-3'), DNA (5'-D(P*GP*GP*GP*TP*CP*CP*TP*AP*GP*GP*AP*CP*CP*C)-3'), ... | | 著者 | Sharma, A, Nair, D.T. | | 登録日 | 2013-01-14 | | 公開日 | 2013-04-17 | | 最終更新日 | 2024-02-28 | | 実験手法 | X-RAY DIFFRACTION (2.33 Å) | | 主引用文献 | A strategically located serine residue is critical for the mutator activity of DNA polymerase IV from Escherichia coli.
Nucleic Acids Res., 41, 2013
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5YUX
 | | DNA polymerase IV - DNA ternary complex 8 | | 分子名称: | DIPHOSPHATE, DNA polymerase IV, DTN1, ... | | 著者 | Kottur, J, Nair, D.T. | | 登録日 | 2017-11-23 | | 公開日 | 2018-12-19 | | 最終更新日 | 2023-11-22 | | 実験手法 | X-RAY DIFFRACTION (2.04 Å) | | 主引用文献 | Pyrophosphate hydrolysis is an intrinsic and critical step of the DNA synthesis reaction
Nucleic Acids Res., 46, 2018
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5YUW
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5YYE
 | | DNA polymerase IV - ternary complex 16 | | 分子名称: | 5'-O-[hydroxy{[hydroxy(phosphonoamino)phosphoryl]oxy}phosphoryl]thymidine, DNA polymerase IV, DTN2, ... | | 著者 | Kottur, J, Nair, D.T. | | 登録日 | 2017-12-08 | | 公開日 | 2018-09-05 | | 最終更新日 | 2023-11-22 | | 実験手法 | X-RAY DIFFRACTION (2.325 Å) | | 主引用文献 | Pyrophosphate hydrolysis is an intrinsic and critical step of the DNA synthesis reaction
Nucleic Acids Res., 46, 2018
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5YV1
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5YV0
 | | DNA polymerase IV - DNA ternary complex 12 | | 分子名称: | DIPHOSPHATE, DNA polymerase IV, DTN1, ... | | 著者 | Kottur, J, Nair, D.T. | | 登録日 | 2017-11-23 | | 公開日 | 2018-11-14 | | 最終更新日 | 2023-11-22 | | 実験手法 | X-RAY DIFFRACTION (2.09 Å) | | 主引用文献 | Pyrophosphate hydrolysis is an intrinsic and critical step of the DNA synthesis reaction.
Nucleic Acids Res., 46, 2018
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5YV3
 | | DNA polymerase IV - DNA ternary complex 7 | | 分子名称: | DIPHOSPHATE, DNA polymerase IV, DTN1, ... | | 著者 | Kottur, J, Nair, D.T. | | 登録日 | 2017-11-23 | | 公開日 | 2018-11-07 | | 最終更新日 | 2023-11-22 | | 実験手法 | X-RAY DIFFRACTION (2.03 Å) | | 主引用文献 | Pyrophosphate hydrolysis is an intrinsic and critical step of the DNA synthesis reaction
Nucleic Acids Res., 46, 2018
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5YV2
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5YYD
 | | DNA polymerase IV - ternary complex 15 | | 分子名称: | 5'-O-[hydroxy{[hydroxy(phosphonoamino)phosphoryl]oxy}phosphoryl]thymidine, DNA polymerase IV, DTN2, ... | | 著者 | Kottur, J, Nair, D.T. | | 登録日 | 2017-12-08 | | 公開日 | 2018-09-05 | | 最終更新日 | 2023-11-22 | | 実験手法 | X-RAY DIFFRACTION (2.05 Å) | | 主引用文献 | Pyrophosphate hydrolysis is an intrinsic and critical step of the DNA synthesis reaction
Nucleic Acids Res., 46, 2018
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5ZLV
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3BSB
 | | Crystal Structure of Human Pumilio1 in Complex with CyclinB reverse RNA | | 分子名称: | 5'-R(*UP*UP*UP*AP*AP*UP*GP*UP*U)-3', Pumilio homolog 1 | | 著者 | Gupta, Y.K, Nair, D.T, Wharton, R.P, Aggarwal, A.K. | | 登録日 | 2007-12-23 | | 公開日 | 2008-04-08 | | 最終更新日 | 2023-11-01 | | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | | 主引用文献 | Structures of human Pumilio with noncognate RNAs reveal molecular mechanisms for binding promiscuity.
Structure, 16, 2008
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3BSX
 | | Crystal Structure of Human Pumilio 1 in complex with Puf5 RNA | | 分子名称: | 5'-R(*UP*UP*GP*UP*AP*AP*UP*AP*UP*UP*A)-3', Pumilio homolog 1 | | 著者 | Gupta, Y.K, Nair, D.T, Wharton, R.P, Aggarwal, A.K. | | 登録日 | 2007-12-26 | | 公開日 | 2008-04-08 | | 最終更新日 | 2023-11-01 | | 実験手法 | X-RAY DIFFRACTION (2.32 Å) | | 主引用文献 | Structures of human Pumilio with noncognate RNAs reveal molecular mechanisms for binding promiscuity.
Structure, 16, 2008
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4EGZ
 | | Crystal Structure of AraR(DBD) in complex with operator ORR3 | | 分子名称: | 5'-D(*AP*AP*AP*TP*TP*TP*GP*TP*CP*CP*GP*TP*AP*TP*AP*CP*AP*TP*TP*TP*T)-3', 5'-D(*TP*AP*AP*AP*AP*TP*GP*TP*AP*TP*AP*CP*GP*GP*AP*CP*AP*AP*AP*TP*T)-3', ACETATE ION, ... | | 著者 | Jain, D, Nair, D.T. | | 登録日 | 2012-04-02 | | 公開日 | 2013-02-06 | | 最終更新日 | 2024-03-20 | | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | | 主引用文献 | Spacing between core recognition motifs determines relative orientation of AraR monomers on bipartite operators.
Nucleic Acids Res., 41, 2013
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4EGY
 | | Crystal Structure of AraR(DBD) in complex with operator ORA1 | | 分子名称: | 5'-D(*AP*AP*AP*AP*TP*TP*GP*TP*TP*CP*GP*TP*AP*CP*AP*AP*AP*TP*AP*TP*T)-3', 5'-D(*TP*AP*AP*TP*AP*TP*TP*TP*GP*TP*AP*CP*GP*AP*AP*CP*AP*AP*TP*TP*T)-3', ACETATE ION, ... | | 著者 | Jain, D, Nair, D.T. | | 登録日 | 2012-04-02 | | 公開日 | 2013-02-06 | | 最終更新日 | 2024-03-20 | | 実験手法 | X-RAY DIFFRACTION (2.301 Å) | | 主引用文献 | Spacing between core recognition motifs determines relative orientation of AraR monomers on bipartite operators.
Nucleic Acids Res., 41, 2013
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4HDH
 | | Crystal Structure of viral RdRp in complex with ATP | | 分子名称: | ADENOSINE-5'-TRIPHOSPHATE, Polyprotein, ZINC ION | | 著者 | Surana, P, Nair, D.T. | | 登録日 | 2012-10-02 | | 公開日 | 2013-12-25 | | 最終更新日 | 2023-09-20 | | 実験手法 | X-RAY DIFFRACTION (2.28 Å) | | 主引用文献 | RNA-dependent RNA polymerase of Japanese encephalitis virus binds the initiator nucleotide GTP to form a mechanistically important pre-initiation state.
Nucleic Acids Res., 42, 2014
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4HDG
 | | Crystal Structure of viral RdRp in complex with GTP | | 分子名称: | GUANOSINE-5'-TRIPHOSPHATE, Polyprotein, ZINC ION | | 著者 | Surana, P, Nair, D.T. | | 登録日 | 2012-10-02 | | 公開日 | 2013-12-25 | | 最終更新日 | 2023-09-20 | | 実験手法 | X-RAY DIFFRACTION (2.38 Å) | | 主引用文献 | RNA-dependent RNA polymerase of Japanese encephalitis virus binds the initiator nucleotide GTP to form a mechanistically important pre-initiation state.
Nucleic Acids Res., 42, 2014
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3H4D
 | | Ternary complex of human DNA polymerase iota with template U/T and incoming dGTP | | 分子名称: | 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, 5'-D(*AP*GP*GP*AP*CP*CP*(DOC)), 5'-D(*TP*(BRU)P*GP*GP*GP*TP*CP*CP*T), ... | | 著者 | Jain, R, Nair, D.T, Johnson, R.E, Prakash, L, Prakash, S, Aggarwal, A.K. | | 登録日 | 2009-04-18 | | 公開日 | 2009-07-21 | | 最終更新日 | 2023-09-06 | | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | | 主引用文献 | Replication across template T/U by human DNA polymerase-iota.
Structure, 17, 2009
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