Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 17068 件

6R5M
DownloadVisualize
BU of 6r5m by Molmil
Crystal structure of toxin MT9 from mamba venom
分子名称: ACETYL GROUP, Dendroaspis polylepis MT9, GLYCEROL, ...
著者Stura, E.A, Tepshi, L, Ciolek, J, Triquigneaux, M, Zoukimian, C, De Waard, M, Beroud, R, Servent, D, Gilles, N, Legrand, P, Ciccone, L.
登録日2019-03-25
公開日2020-02-12
最終更新日2022-05-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献MT9, a natural peptide from black mamba venom antagonizes the muscarinic type 2 receptor and reverses the M2R-agonist-induced relaxation in rat and human arteries
Biomed Pharmacother, 150, 2022
6RD1
DownloadVisualize
BU of 6rd1 by Molmil
Ruminococcus gnavus sialic acid aldolase catalytic lysine mutant in complex with sialic acid
分子名称: 5-(acetylamino)-3,5-dideoxy-D-glycero-D-galacto-non-2-ulosonic acid, Putative N-acetylneuraminate lyase
著者Owen, C.D, Bell, A, Juge, N, Walsh, M.A.
登録日2019-04-12
公開日2019-09-25
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.892 Å)
主引用文献Elucidation of a sialic acid metabolism pathway in mucus-foraging Ruminococcus gnavus unravels mechanisms of bacterial adaptation to the gut.
Nat Microbiol, 4, 2019
6RD6
DownloadVisualize
BU of 6rd6 by Molmil
CryoEM structure of Polytomella F-ATP synthase, focussed refinement of upper peripheral stalk
分子名称: ASA-2: Polytomella F-ATP synthase associated subunit 2, ATP synthase subunit alpha, Mitochondrial ATP synthase associated protein ASA4, ...
著者Murphy, B.J, Klusch, N, Yildiz, O, Kuhlbrandt, W.
登録日2019-04-12
公開日2019-07-03
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (2.75 Å)
主引用文献Rotary substates of mitochondrial ATP synthase reveal the basis of flexible F 1 -F o coupling.
Science, 364, 2019
6RD8
DownloadVisualize
BU of 6rd8 by Molmil
CryoEM structure of Polytomella F-ATP synthase, c-ring position 2, focussed refinement of Fo and peripheral stalk
分子名称: ASA-10: Polytomella F-ATP synthase associated subunit 10, ASA-9: Polytomella F-ATP synthase associated subunit 9, ATP synthase associated protein ASA1, ...
著者Murphy, B.J, Klusch, N, Yildiz, O, Kuhlbrandt, W.
登録日2019-04-12
公開日2019-07-03
最終更新日2020-09-30
実験手法ELECTRON MICROSCOPY (3.08 Å)
主引用文献Rotary substates of mitochondrial ATP synthase reveal the basis of flexible F 1 -F o coupling.
Science, 364, 2019
6RDF
DownloadVisualize
BU of 6rdf by Molmil
CryoEM structure of Polytomella F-ATP synthase, Primary rotary state 3, monomer-masked refinement
分子名称: ASA-10: Polytomella F-ATP synthase associated subunit 10, ASA-2: Polytomella F-ATP synthase associated subunit 2, ASA-9: Polytomella F-ATP synthase associated subunit 9, ...
著者Murphy, B.J, Klusch, N, Yildiz, O, Kuhlbrandt, W.
登録日2019-04-12
公開日2019-07-03
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Rotary substates of mitochondrial ATP synthase reveal the basis of flexible F 1 -F o coupling.
Science, 364, 2019
6RDC
DownloadVisualize
BU of 6rdc by Molmil
CryoEM structure of Polytomella F-ATP synthase, Primary rotary state 2, composite map
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ASA-10: Polytomella F-ATP synthase associated subunit 10, ...
著者Murphy, B.J, Klusch, N, Yildiz, O, Kuhlbrandt, W.
登録日2019-04-12
公開日2019-07-03
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Rotary substates of mitochondrial ATP synthase reveal the basis of flexible F 1 -F o coupling.
Science, 364, 2019
6RDH
DownloadVisualize
BU of 6rdh by Molmil
CryoEM structure of Polytomella F-ATP synthase, Rotary substate 1A, composite map
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ASA-10: Polytomella F-ATP synthase associated subunit 10, ...
著者Murphy, B.J, Klusch, N, Yildiz, O, Kuhlbrandt, W.
登録日2019-04-12
公開日2019-07-03
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Rotary substates of mitochondrial ATP synthase reveal the basis of flexible F 1 -F o coupling.
Science, 364, 2019
6RDO
DownloadVisualize
BU of 6rdo by Molmil
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 1C, composite map
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ASA-10: Polytomella F-ATP synthase associated subunit 10, ...
著者Murphy, B.J, Klusch, N, Yildiz, O, Kuhlbrandt, W.
登録日2019-04-12
公開日2019-07-03
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Rotary substates of mitochondrial ATP synthase reveal the basis of flexible F 1 -F o coupling.
Science, 364, 2019
6RDY
DownloadVisualize
BU of 6rdy by Molmil
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 1F, focussed refinement of F1 head and rotor
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase gamma chain, ...
著者Murphy, B.J, Klusch, N, Yildiz, O, Kuhlbrandt, W.
登録日2019-04-12
公開日2019-07-03
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Rotary substates of mitochondrial ATP synthase reveal the basis of flexible F 1 -F o coupling.
Science, 364, 2019
6RDW
DownloadVisualize
BU of 6rdw by Molmil
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 1F, composite map
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ASA-10: Polytomella F-ATP synthase associated subunit 10, ...
著者Murphy, B.J, Klusch, N, Yildiz, O, Kuhlbrandt, W.
登録日2019-04-12
公開日2019-07-03
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Rotary substates of mitochondrial ATP synthase reveal the basis of flexible F 1 -F o coupling.
Science, 364, 2019
6RE5
DownloadVisualize
BU of 6re5 by Molmil
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 2C, composite map
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ASA-10: Polytomella F-ATP synthase associated subunit 10, ...
著者Murphy, B.J, Klusch, N, Yildiz, O, Kuhlbrandt, W.
登録日2019-04-12
公開日2019-07-03
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Rotary substates of mitochondrial ATP synthase reveal the basis of flexible F 1 -F o coupling.
Science, 364, 2019
6RED
DownloadVisualize
BU of 6red by Molmil
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 3A, focussed refinement of F1 head and rotor
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase gamma chain, ...
著者Murphy, B.J, Klusch, N, Yildiz, O, Kuhlbrandt, W.
登録日2019-04-12
公開日2019-07-03
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Rotary substates of mitochondrial ATP synthase reveal the basis of flexible F 1 -F o coupling.
Science, 364, 2019
6RE9
DownloadVisualize
BU of 6re9 by Molmil
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 2D, monomer-masked refinement
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ASA-10: Polytomella F-ATP synthase associated subunit 10, ...
著者Murphy, B.J, Klusch, N, Yildiz, O, Kuhlbrandt, W.
登録日2019-04-12
公開日2019-07-03
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Rotary substates of mitochondrial ATP synthase reveal the basis of flexible F 1 -F o coupling.
Science, 364, 2019
6R8I
DownloadVisualize
BU of 6r8i by Molmil
PP4R3A EVH1 domain bound to FxxP motif
分子名称: SER-LEU-PRO-PHE-THR-PHE-LYS-VAL-PRO-ALA-PRO-PRO-PRO-SER-LEU-PRO-PRO-SER, Serine/threonine-protein phosphatase 4 regulatory subunit 3A
著者Ueki, Y, Kruse, T, Weisser, M.B, Sundell, G.N, Yoo Larsen, M.S, Lopez Mendez, B, Jenkins, N.P, Garvanska, D.H, Cressey, L, Zhang, G, Davey, N, Montoya, G, Ivarsson, Y, Kettenbach, A, Nilsson, J.
登録日2019-04-02
公開日2019-10-16
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.517 Å)
主引用文献A Consensus Binding Motif for the PP4 Protein Phosphatase.
Mol.Cell, 76, 2019
6RET
DownloadVisualize
BU of 6ret by Molmil
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 3C, monomer-masked refinement
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ASA-10: Polytomella F-ATP synthase associated subunit 10, ...
著者Murphy, B.J, Klusch, N, Yildiz, O, Kuhlbrandt, W.
登録日2019-04-12
公開日2019-07-03
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Rotary substates of mitochondrial ATP synthase reveal the basis of flexible F 1 -F o coupling.
Science, 364, 2019
5O5C
DownloadVisualize
BU of 5o5c by Molmil
The crystal structure of DfoJ, the desferrioxamine biosynthetic pathway lysine decarboxylase from the fire blight disease pathogen Erwinia amylovora
分子名称: PYRIDOXAL-5'-PHOSPHATE, Putative decarboxylase involved in desferrioxamine biosynthesis
著者Salomone-Stagni, M, Bartho, J.D, Polsinelli, I, Bellini, D, Walsh, M.A, Demitri, N, Benini, S.
登録日2017-06-01
公開日2018-02-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A complete structural characterization of the desferrioxamine E biosynthetic pathway from the fire blight pathogen Erwinia amylovora.
J. Struct. Biol., 202, 2018
5O89
DownloadVisualize
BU of 5o89 by Molmil
Crystal Structure of rsEGFP2 in the fluorescent on-state determined by SFX
分子名称: Green fluorescent protein
著者Coquelle, N, Sliwa, M, Woodhouse, J, Schiro, G, Adam, V, Aquila, A, Barends, T.R.M, Boutet, S, Byrdin, M, Carbajo, S, De la Mora, E, Doak, R.B, Feliks, M, Fieschi, F, Foucar, L, Guillon, V, Hilpert, M, Hunter, M, Jakobs, S, Koglin, J.E, Kovacsova, G, Lane, T.J, Levy, B, Liang, M, Nass, K, Ridard, J, Robinson, J.S, Roome, C.M, Ruckebusch, C, Seaberg, M, Thepaut, M, Cammarata, M, Demachy, I, Field, M, Shoeman, R.L, Bourgeois, D, Colletier, J.P, Schlichting, I, Weik, M.
登録日2017-06-12
公開日2017-12-13
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Chromophore twisting in the excited state of a photoswitchable fluorescent protein captured by time-resolved serial femtosecond crystallography.
Nat Chem, 10, 2018
5O8C
DownloadVisualize
BU of 5o8c by Molmil
Composite structure of rsEGFP2 1ps following 400nm-laser irradiation of the off-state.
分子名称: Green fluorescent protein
著者Coquelle, N, Sliwa, M, Woodhouse, J, Schiro, G, Adam, V, Aquila, A, Barends, T.R.M, Boutet, S, Byrdin, M, Carbajo, S, De la Mora, E, Doak, R.B, Feliks, M, Fieschi, F, Foucar, L, Guillon, V, Hilpert, M, Hunter, M, Jakobs, S, Koglin, J.E, Kovacsova, G, Lane, T.J, Levy, B, Liang, M, Nass, K, Ridard, J, Robinson, J.S, Roome, C.M, Ruckebusch, C, Seaberg, M, Thepaut, M, Cammarata, M, Demachy, I, Field, M, Shoeman, R.L, Bourgeois, D, Colletier, J.P, Schlichting, I, Weik, M.
登録日2017-06-12
公開日2017-12-06
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Chromophore twisting in the excited state of a photoswitchable fluorescent protein captured by time-resolved serial femtosecond crystallography.
Nat Chem, 10, 2018
5O9H
DownloadVisualize
BU of 5o9h by Molmil
Crystal structure of thermostabilised human C5a anaphylatoxin chemotactic receptor 1 (C5aR) in complex with NDT9513727
分子名称: 1-(1,3-benzodioxol-5-yl)-~{N}-(1,3-benzodioxol-5-ylmethyl)-~{N}-[(3-butyl-2,5-diphenyl-imidazol-4-yl)methyl]methanamine, C5a anaphylatoxin chemotactic receptor 1, CITRIC ACID, ...
著者Robertson, N, Rappas, M, Dore, A.S, Brown, J, Bottegoni, G, Koglin, M, Cansfield, J, Jazayeri, A, Cooke, R.M, Marshall, F.H.
登録日2017-06-19
公開日2018-01-10
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure of the complement C5a receptor bound to the extra-helical antagonist NDT9513727.
Nature, 553, 2018
5O8R
DownloadVisualize
BU of 5o8r by Molmil
The crystal structure of DfoA bound to FAD and NADP; the desferrioxamine biosynthetic pathway cadaverine monooxygenase from the fire blight disease pathogen Erwinia amylovora
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, L-lysine 6-monooxygenase involved in desferrioxamine biosynthesis, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Salomone-Stagni, M, Bartho, J.D, Polsinelli, I, Bellini, D, Walsh, M.A, Demitri, N, Benini, S.
登録日2017-06-14
公開日2018-02-28
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献A complete structural characterization of the desferrioxamine E biosynthetic pathway from the fire blight pathogen Erwinia amylovora.
J. Struct. Biol., 202, 2018
5O96
DownloadVisualize
BU of 5o96 by Molmil
Structure of the putative methyltransferase Lpg2936 from Legionella pneumophila in complex with the bound cofactor SAM
分子名称: Ribosomal RNA small subunit methyltransferase E, S-ADENOSYLMETHIONINE
著者Pinotsis, N, Waksman, G.
登録日2017-06-15
公開日2017-11-08
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of the Legionella pneumophila Lpg2936 in complex with the cofactor S-adenosyl-L-methionine reveals novel insights into the mechanism of RsmE family methyltransferases.
Protein Sci., 26, 2017
6RRR
DownloadVisualize
BU of 6rrr by Molmil
Crystal structure of the tyrosinase PvdP from Pseudomonas aeruginosa
分子名称: GLYCEROL, PvdP
著者Wibowo, J.P, Batista, F.A, van Oosterwijk, N, Groves, M.R, Dekker, F.J, Quax, W.J.
登録日2019-05-20
公開日2020-04-15
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献A novel mechanism of inhibition by phenylthiourea on PvdP, a tyrosinase synthesizing pyoverdine of Pseudomonas aeruginosa.
Int.J.Biol.Macromol., 146, 2020
5O5I
DownloadVisualize
BU of 5o5i by Molmil
Robo1 Ig5
分子名称: Roundabout homolog 1
著者Aleksandrova, N, Gutsche, I, Kandiah, E, Avilov, S.V, Petoukhov, M.V, Seiradake, E, McCarthy, A.A.
登録日2017-06-01
公開日2018-01-17
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.01 Å)
主引用文献Robo1 Forms a Compact Dimer-of-Dimers Assembly.
Structure, 26, 2018
6RVV
DownloadVisualize
BU of 6rvv by Molmil
Structure of left-handed protein cage consisting of 24 eleven-membered ring proteins held together by gold (I) bridges.
分子名称: GOLD ION, Transcription attenuation protein MtrB
著者Malay, A.D, Miyazaki, N, Biela, A.P, Iwasaki, K, Heddle, J.G.
登録日2019-06-03
公開日2019-06-12
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献An ultra-stable gold-coordinated protein cage displaying reversible assembly.
Nature, 569, 2019
5OA9
DownloadVisualize
BU of 5oa9 by Molmil
Human translation re-initiation complex containing eIF2D
分子名称: Eukaryotic translation initiation factor 2D
著者Weisser, M, Schaefer, T, Leibundgut, M, Boehringer, D, Aylett, C.H.S, Ban, N.
登録日2017-06-21
公開日2017-07-26
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural and Functional Insights into Human Re-initiation Complexes.
Mol. Cell, 67, 2017

224201

件を2024-08-28に公開中

PDB statisticsPDBj update infoContact PDBjnumon