Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 17068 件

4XKF
DownloadVisualize
BU of 4xkf by Molmil
Crystal structure of hemagglutinin from Taiwan (2013) H6N1 influenza virus in complex with LSTa
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1 chain, Hemagglutinin HA2 chain, ...
著者Tzarum, N, Zhu, X, Wilson, I.A.
登録日2015-01-11
公開日2015-03-25
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.446 Å)
主引用文献Structure and Receptor Binding of the Hemagglutinin from a Human H6N1 Influenza Virus.
Cell Host Microbe, 17, 2015
6EZ7
DownloadVisualize
BU of 6ez7 by Molmil
Pes4 RRM3 Structure
分子名称: DI(HYDROXYETHYL)ETHER, Protein PES4
著者Mohamad, N, Bravo, J.
登録日2017-11-14
公開日2018-12-12
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Pes4 RRM3 Structure
To Be Published
8RJZ
DownloadVisualize
BU of 8rjz by Molmil
Crystal structure of SARS-CoV-2 main protease (MPro) in complex with the non-covalent inhibitor GUE-3801 (compound 80 in publication)
分子名称: (7~{S})-6-[2-[2,4-bis(chloranyl)phenoxy]ethanoyl]-14-fluoranyl-10-(iminomethyl)-9-methyl-7-(phenylmethyl)-2-oxa-6,9,10-triazabicyclo[10.4.0]hexadeca-1(12),13,15-trien-8-one, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3C-like proteinase nsp5, ...
著者Strater, N, Claff, T, Sylvester, K, Mueller, C.E, Guetschow, M, Useini, A.
登録日2023-12-22
公開日2024-05-29
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Macrocyclic Azapeptide Nitriles: Structure-Based Discovery of Potent SARS-CoV-2 Main Protease Inhibitors as Antiviral Drugs.
J.Med.Chem., 67, 2024
7PG5
DownloadVisualize
BU of 7pg5 by Molmil
Crystal Structure of PI3Kalpha
分子名称: GLYCEROL, PHOSPHATE ION, Phosphatidylinositol 3-kinase regulatory subunit alpha, ...
著者Gong, G, Pinotsis, N, Williams, R.L, Vanhaesebroeck, B.
登録日2021-08-13
公開日2022-08-24
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.20029068 Å)
主引用文献A small-molecule PI3K alpha activator for cardioprotection and neuroregeneration.
Nature, 618, 2023
4XZQ
DownloadVisualize
BU of 4xzq by Molmil
Nucleosome disassembly by RSC and SWI/SNF is enhanced by H3 acetylation near the nucleosome dyad axis
分子名称: DNA (147-MER), Histone H2A, Histone H2B 1.1, ...
著者Dechassa, M.L, Luger, K, Chatterjee, N, North, J.A, Manohar, M, Prasad, R, Ottessen, J.J, Poirier, M.G, Bartholomew, B.
登録日2015-02-04
公開日2015-10-14
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Histone Acetylation near the Nucleosome Dyad Axis Enhances Nucleosome Disassembly by RSC and SWI/SNF.
Mol.Cell.Biol., 35, 2015
4N8M
DownloadVisualize
BU of 4n8m by Molmil
Structural polymorphism in the N-terminal oligomerization domain of NPM1
分子名称: COBALT (II) ION, Nucleophosmin
著者Mitrea, D, Royappa, G, Buljan, M, Yun, M, Pytel, N, Satumba, J, Nourse, A, Park, C, Babu, M.M, White, S.W, Kriwacki, R.W.
登録日2013-10-17
公開日2014-03-12
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.802 Å)
主引用文献Structural polymorphism in the N-terminal oligomerization domain of NPM1.
Proc.Natl.Acad.Sci.USA, 111, 2014
8RLN
DownloadVisualize
BU of 8rln by Molmil
Crystal structure of human adenosine A2A receptor (construct A2A-PSB2-bRIL) complexed with the partial antagonist LUF5834 at the orthosteric pocket
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 2-azanyl-4-(4-hydroxyphenyl)-6-(1~{H}-imidazol-2-ylmethylsulfanyl)pyridine-3,5-dicarbonitrile, ...
著者Strater, N, Claff, T, Weisse, R.H, Muller, C.E.
登録日2024-01-03
公開日2024-06-19
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献Structural Insights into Partial Activation of the Prototypic G Protein-Coupled Adenosine A 2A Receptor.
Acs Pharmacol Transl Sci, 7, 2024
4MOA
DownloadVisualize
BU of 4moa by Molmil
Crystal structure of CRY4BA-R203Q TOXIN
分子名称: Pesticidal crystal protein cry4Ba
著者Thamwiriyasati, N, Angsuthanasombat, C, Chen, C.-J.
登録日2013-09-11
公開日2014-12-10
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Potential Prepore Trimer Formation by the Bacillus thuringiensis Mosquito-specific Toxin: MOLECULAR INSIGHTS INTO A CRITICAL PREREQUISITE OF MEMBRANE-BOUND MONOMERS
J.Biol.Chem., 290, 2015
7PG6
DownloadVisualize
BU of 7pg6 by Molmil
Crystal Structure of PI3Kalpha in complex with the inhibitor NVP-BYL719
分子名称: (2S)-N~1~-{4-methyl-5-[2-(1,1,1-trifluoro-2-methylpropan-2-yl)pyridin-4-yl]-1,3-thiazol-2-yl}pyrrolidine-1,2-dicarboxamide, Phosphatidylinositol 3-kinase regulatory subunit alpha, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform, ...
著者Gong, G, Pinotsis, N, Williams, R.L, Vanhaesebroeck, B.
登録日2021-08-13
公開日2022-08-24
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.49943733 Å)
主引用文献A small-molecule PI3K alpha activator for cardioprotection and neuroregeneration.
Nature, 618, 2023
8RH1
DownloadVisualize
BU of 8rh1 by Molmil
Trimeric HSV-2F gB ectodomain in postfusion conformation with three bound HDIT101 Fab molecules.
分子名称: Envelope glycoprotein B, HDIT101 Fab heavy chain, HDIT101 Fab light chain
著者Kalbermatter, D, Seyfizadeh, N, Imhof, T, Ries, M, Mueller, C, Jenner, L, Blumenschein, E, Yendrzheyevskiy, A, Moog, K, Eckert, D, Engel, R, Diebolder, P, Chami, M, Krauss, J, Schaller, T, Arndt, M.
登録日2023-12-14
公開日2024-06-19
実験手法ELECTRON MICROSCOPY (3.45 Å)
主引用文献Development of a highly effective combination monoclonal antibody therapy against Herpes simplex virus.
J.Biomed.Sci., 31, 2024
4XI0
DownloadVisualize
BU of 4xi0 by Molmil
MamA 41-end from Desulfovibrio magneticus RS-1
分子名称: Magnetosome protein MamA
著者Zarivach, R, Zeytuni, N, Cronin, S, Davidov, G, Baran, D, Stein, T.
登録日2015-01-06
公開日2015-08-19
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.88 Å)
主引用文献MamA as a Model Protein for Structure-Based Insight into the Evolutionary Origins of Magnetotactic Bacteria.
Plos One, 10, 2015
8RH0
DownloadVisualize
BU of 8rh0 by Molmil
Trimeric HSV-1F gB ectodomain in postfusion conformation with three bound HDIT102 Fab molecules.
分子名称: Envelope glycoprotein B, HDIT102 Fab heavy chain
著者Kalbermatter, D, Seyfizadeh, N, Imhof, T, Ries, M, Mueller, C, Jenner, L, Blumenschein, E, Yendrzheyevskiy, A, Moog, K, Eckert, D, Engel, R, Diebolder, P, Chami, M, Krauss, J, Schaller, T, Arndt, M.
登録日2023-12-14
公開日2024-06-19
実験手法ELECTRON MICROSCOPY (3.44 Å)
主引用文献Development of a highly effective combination monoclonal antibody therapy against Herpes simplex virus.
J.Biomed.Sci., 31, 2024
6F4G
DownloadVisualize
BU of 6f4g by Molmil
'Crystal structure of the Drosophila melanogaster SNF/U2A'/U2-SL4 complex
分子名称: CHLORIDE ION, Probable U2 small nuclear ribonucleoprotein A', SULFATE ION, ...
著者Weber, G, DeKoster, G, Holton, N, Hall, K.B, Wahl, M.C.
登録日2017-11-29
公開日2018-06-20
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Molecular principles underlying dual RNA specificity in the Drosophila SNF protein.
Nat Commun, 9, 2018
4XKE
DownloadVisualize
BU of 4xke by Molmil
Crystal structure of hemagglutinin from Taiwan (2013) H6N1 influenza virus in complex with 3'-SLN
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1 chain, Hemagglutinin HA2 chain, ...
著者Tzarum, N, Zhu, X, Wilson, I.A.
登録日2015-01-11
公開日2015-04-01
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.356 Å)
主引用文献Structure and Receptor Binding of the Hemagglutinin from a Human H6N1 Influenza Virus.
Cell Host Microbe, 17, 2015
4XU4
DownloadVisualize
BU of 4xu4 by Molmil
Crystal structure of a mycobacterial Insig homolog MvINS from Mycobacterium vanbaalenii at 1.9A resolution
分子名称: DECYLAMINE-N,N-DIMETHYL-N-OXIDE, Uncharacterized protein, nonyl beta-D-glucopyranoside
著者Ren, R.B, Wu, J.P, Yan, C.Y, He, Y, Yan, N.
登録日2015-01-25
公開日2015-10-14
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.901 Å)
主引用文献PROTEIN STRUCTURE. Crystal structure of a mycobacterial Insig homolog provides insight into how these sensors monitor sterol levels
Science, 349, 2015
7PVN
DownloadVisualize
BU of 7pvn by Molmil
Crystal Structure of Human UBA6 in Complex with ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, CHLORIDE ION, ...
著者Truongvan, N, Li, S, Schindelin, H.
登録日2021-10-05
公開日2022-08-31
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.71 Å)
主引用文献Structures of UBA6 explain its dual specificity for ubiquitin and FAT10.
Nat Commun, 13, 2022
8RGZ
DownloadVisualize
BU of 8rgz by Molmil
Trimeric HSV-1F gB ectodomain in postfusion conformation with three bound HDIT101 Fab molecules.
分子名称: Envelope glycoprotein B, HDIT101 Fab heavy chain, HDIT101 Fab light chain
著者Kalbermatter, D, Seyfizadeh, N, Imhof, T, Ries, M, Mueller, C, Jenner, L, Blumenschein, E, Yendrzheyevskiy, A, Moog, K, Eckert, D, Engel, R, Diebolder, P, Chami, M, Krauss, J, Schaller, T, Arndt, M.
登録日2023-12-14
公開日2024-06-19
実験手法ELECTRON MICROSCOPY (3.27 Å)
主引用文献Development of a highly effective combination monoclonal antibody therapy against Herpes simplex virus.
J.Biomed.Sci., 31, 2024
8QDC
DownloadVisualize
BU of 8qdc by Molmil
Crystal structure of SARS-CoV-2 main protease (MPro) in complex with the covalent inhibitor GUE-3642 (compound 1 in publication)
分子名称: (phenylmethyl) ~{N}-[(2~{S})-1-[[(2~{S})-1-[[(2~{S})-1-[[iminomethyl-(phenylmethyl)amino]-methyl-amino]-1-oxidanylidene-3-phenyl-propan-2-yl]amino]-3,3-dimethyl-1-oxidanylidene-butan-2-yl]amino]-1-oxidanylidene-butan-2-yl]carbamate, 3C-like proteinase nsp5, CHLORIDE ION, ...
著者Strater, N, Claff, T, Sylvester, K, Mueller, C.E, Guetschow, M.
登録日2023-08-28
公開日2024-07-03
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Development of an active-site titrant for SARS-CoV-2 main protease as an indispensable tool for evaluating enzyme kinetics.
Acta Pharm Sin B, 14, 2024
6F2T
DownloadVisualize
BU of 6f2t by Molmil
Crystal structure of ectonucleotide phosphodiesterase/pyrophosphatase-3 (NPP3)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Dohler, C, Zebisch, M, Strater, N.
登録日2017-11-27
公開日2018-08-01
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure and substrate binding mode of ectonucleotide phosphodiesterase/pyrophosphatase-3 (NPP3).
Sci Rep, 8, 2018
6EWN
DownloadVisualize
BU of 6ewn by Molmil
HspA from Thermosynechococcus vulcanus in the presence of 2M urea with initial stages of denaturation
分子名称: HspA, UREA
著者Adir, N, Ghosh, S, Salama, F, Dines, M.
登録日2017-11-06
公開日2018-10-17
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Biophysical and structural characterization of the small heat shock protein HspA from Thermosynechococcus vulcanus in 2 M urea.
Biochim Biophys Acta Proteins Proteom, 1867, 2019
8QHS
DownloadVisualize
BU of 8qhs by Molmil
Cryo-EM structure of the monocin tail-tube, MttP.
分子名称: Antigen A
著者Nadejda, S, Lichtenstein, R, Schlussel, S, Azulay, G, Borovok, I, Holdengraber, V, Elad, N, Wolf, S.G, Zalk, R, Zarivach, R, Frank, G.A, Herskovits, A.A.
登録日2023-09-10
公開日2024-06-19
実験手法ELECTRON MICROSCOPY (2.3 Å)
主引用文献Tailocin cell factories
To Be Published
7YLO
DownloadVisualize
BU of 7ylo by Molmil
Conversion of indole-3-acetic acid into indole-3-aldehyde in bacteria Metabolic network of tryptophan around the indole-3-aldehyde formation
分子名称: Dyp-type peroxidase, PROTOPORPHYRIN IX CONTAINING FE
著者Cheng, J, Luo, Y, Zhu, J, Tan, R, Wang, N, Lebedev, A.A.
登録日2022-07-26
公開日2023-07-05
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Conversion of indole-3-acetic acid into indole-3-aldehyde in bacteria Metabolic network of tryptophan around the indole-3-aldehyde formation
To Be Published
4XTC
DownloadVisualize
BU of 4xtc by Molmil
Crystal structure of bacterial alginate ABC transporter in complex with alginate pentasaccharide-bound periplasmic protein
分子名称: AlgM1, AlgM2, AlgQ2, ...
著者Kaneko, A, Maruyama, Y, Mizuno, N, Baba, S, Kumasaka, T, Mikami, B, Murata, K, Hashimoto, W.
登録日2015-01-23
公開日2016-03-02
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献A solute-binding protein in the closed conformation induces ATP hydrolysis in a bacterial ATP-binding cassette transporter involved in the import of alginate.
J.Biol.Chem., 292, 2017
8RH2
DownloadVisualize
BU of 8rh2 by Molmil
Trimeric HSV-2G gB ectodomain in postfusion conformation with three bound HDIT102 Fab molecules.
分子名称: Envelope glycoprotein B, HDIT102 Fab heavy chain, HDIT102 Fab light chain
著者Kalbermatter, D, Seyfizadeh, N, Imhof, T, Ries, M, Mueller, C, Jenner, L, Blumenschein, E, Yendrzheyevskiy, A, Moog, K, Eckert, D, Engel, R, Diebolder, P, Chami, M, Krauss, J, Schaller, T, Arndt, M.
登録日2023-12-14
公開日2024-06-19
実験手法ELECTRON MICROSCOPY (3.12 Å)
主引用文献Development of a highly effective combination monoclonal antibody therapy against Herpes simplex virus.
J.Biomed.Sci., 31, 2024
6F36
DownloadVisualize
BU of 6f36 by Molmil
Polytomella Fo model
分子名称: Mitochondrial ATP synthase subunit 6, Mitochondrial ATP synthase subunit ASA6, Mitochondrial ATP synthase subunit c
著者Yildiz, O, Kuehlbrandt, W, Klusch, N, Murphy, B.J, Mills, D.J.
登録日2017-11-28
公開日2017-12-20
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structural basis of proton translocation and force generation in mitochondrial ATP synthase.
Elife, 6, 2017

224201

件を2024-08-28に公開中

PDB statisticsPDBj update infoContact PDBjnumon