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PDB: 35 results

7Z5O
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BU of 7z5o by Molmil
W-formate dehydrogenase from Desulfovibrio vulgaris - Dithionite reduced form
Descriptor: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, DI(HYDROXYETHYL)ETHER, Formate dehydrogenase, ...
Authors:Mota, C, Oliveira, A.R, Klymanska, K, Pereira, I.C, Romao, M.J.
Deposit date:2022-03-09
Release date:2022-07-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.527 Å)
Cite:Spectroscopic and Structural Characterization of Reduced Desulfovibrio vulgaris Hildenborough W-FdhAB Reveals Stable Metal Coordination during Catalysis.
Acs Chem.Biol., 17, 2022
7OPN
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BU of 7opn by Molmil
Human Aldehyde Oxidase SNP R1231H in complex with Raloxifene
Descriptor: 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, Aldehyde oxidase, DIMETHYL SULFOXIDE, ...
Authors:Mota, C, Coelho, C, Santos Silva, T, Romao, M.J.
Deposit date:2021-06-01
Release date:2021-09-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Interrogating the Inhibition Mechanisms of Human Aldehyde Oxidase by X-ray Crystallography and NMR Spectroscopy: The Raloxifene Case.
J.Med.Chem., 64, 2021
7ORC
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BU of 7orc by Molmil
Human Aldehyde Oxidase in complex with Raloxifene
Descriptor: Aldehyde oxidase, DIOXOTHIOMOLYBDENUM(VI) ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Mota, C, Coelho, C, Santos Silva, T, Romao, M.J.
Deposit date:2021-06-05
Release date:2021-09-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Interrogating the Inhibition Mechanisms of Human Aldehyde Oxidase by X-ray Crystallography and NMR Spectroscopy: The Raloxifene Case.
J.Med.Chem., 64, 2021
6Q6Q
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BU of 6q6q by Molmil
Human aldehyde oxidase SNP G1269R
Descriptor: Aldehyde oxidase, FE2/S2 (INORGANIC) CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Mota, C, Coelho, C, Santos-Silva, T, Romao, M.J.
Deposit date:2018-12-11
Release date:2019-05-01
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.10003781 Å)
Cite:Human aldehyde oxidase (hAOX1): structure determination of the Moco-free form of the natural variant G1269R and biophysical studies of single nucleotide polymorphisms.
Febs Open Bio, 9, 2019
8PVZ
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BU of 8pvz by Molmil
Manganese-dependent transcriptional repressor DR2539 complexed with cadmium
Descriptor: CADMIUM ION, Iron dependent repressor, putative
Authors:Mota, C, De Sanctis, D.
Deposit date:2023-07-18
Release date:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Metal ion activation and DNA recognition by the Deinococcus radiodurans manganese sensor DR2539.
Febs J., 2024
8PVT
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BU of 8pvt by Molmil
Manganese-dependent transcriptional repressor DR2539 complexed with cadmium (SAD 7 keV)
Descriptor: CADMIUM ION, Iron dependent repressor, putative
Authors:Mota, C, De Sanctis, D.
Deposit date:2023-07-18
Release date:2024-05-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Metal ion activation and DNA recognition by the Deinococcus radiodurans manganese sensor DR2539.
Febs J., 2024
8PW0
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BU of 8pw0 by Molmil
Manganese-dependent transcriptional repressor DR2539 complexed with manganese and bound to dr1709 promotor
Descriptor: DNA (5'-D(*TP*AP*TP*TP*TP*TP*AP*GP*GP*CP*GP*CP*GP*AP*CP*TP*AP*AP*AP*AP*T)-3'), GLYCEROL, Iron dependent repressor, ...
Authors:Mota, C, De Sanctis, D.
Deposit date:2023-07-18
Release date:2024-05-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Metal ion activation and DNA recognition by the Deinococcus radiodurans manganese sensor DR2539.
Febs J., 2024
5HVA
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BU of 5hva by Molmil
Crystal structure of DR2231 in complex with dUMPNPP and magnesium.
Descriptor: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE, DR2231, MAGNESIUM ION
Authors:Mota, C.S, Goncalves, A.M.D, de Sanctis, D.
Deposit date:2016-01-28
Release date:2016-10-26
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Deinococcus radiodurans DR2231 is a two-metal-ion mechanism hydrolase with exclusive activity on dUTP.
FEBS J., 283, 2016
5HZZ
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BU of 5hzz by Molmil
Crystal structure of DR2231_E47A mutant in complex with dUMP and manganese
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, DR2231, MANGANESE (II) ION
Authors:Mota, C.S, Goncalves, A.M.D, de Sanctis, D.
Deposit date:2016-02-03
Release date:2016-10-26
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:Deinococcus radiodurans DR2231 is a two-metal-ion mechanism hydrolase with exclusive activity on dUTP.
FEBS J., 283, 2016
5HX1
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BU of 5hx1 by Molmil
Crystal structure of DR2231_E46A mutant in complex with dUMP and magnesium
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, DR2231, MAGNESIUM ION
Authors:Mota, C.S, Goncalves, A.M.D, de Sanctis, D.
Deposit date:2016-01-29
Release date:2016-10-26
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.799 Å)
Cite:Deinococcus radiodurans DR2231 is a two-metal-ion mechanism hydrolase with exclusive activity on dUTP.
FEBS J., 283, 2016
5HYL
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BU of 5hyl by Molmil
Crystal structure of DR2231_E47A mutant in complex with dUMPNPP and magnesium
Descriptor: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE, DR2231, MAGNESIUM ION
Authors:Mota, C.S, Goncalves, A.M.D, de Sanctis, D.
Deposit date:2016-02-01
Release date:2016-10-26
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Deinococcus radiodurans DR2231 is a two-metal-ion mechanism hydrolase with exclusive activity on dUTP.
FEBS J., 283, 2016
5I0J
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BU of 5i0j by Molmil
Crystal structure of DR2231_E47A mutant in complex with dUMP
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, DR2231
Authors:Mota, C.S, Goncalves, A.M.D, de Sanctis, D.
Deposit date:2016-02-04
Release date:2016-10-26
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Deinococcus radiodurans DR2231 is a two-metal-ion mechanism hydrolase with exclusive activity on dUTP.
FEBS J., 283, 2016
5I0M
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BU of 5i0m by Molmil
Crystal structure of DR2231_E79A mutant in complex with dUMP
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, DR2231
Authors:Mota, C.S, Goncalves, A.M.D, de Sanctis, D.
Deposit date:2016-02-04
Release date:2016-10-26
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Deinococcus radiodurans DR2231 is a two-metal-ion mechanism hydrolase with exclusive activity on dUTP.
FEBS J., 283, 2016
5HWU
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BU of 5hwu by Molmil
Crystal Structure of DR2231_E46A mutant in complex with dUMPNPP and Manganese
Descriptor: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE, DR2231, GLYCEROL, ...
Authors:Mota, C.S, Goncalves, A.M.D, de Sanctis, D.
Deposit date:2016-01-29
Release date:2016-10-26
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Deinococcus radiodurans DR2231 is a two-metal-ion mechanism hydrolase with exclusive activity on dUTP.
FEBS J., 283, 2016
8RCC
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BU of 8rcc by Molmil
W-formate dehydrogenase from Desulfovibrio vulgaris - aerobic soaked with 48 bar CO2 for 1 min
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, CARBON DIOXIDE, ...
Authors:Vilela-Alves, G, Carpentier, P, Manuel, R.R, Pereira, I.C, Romao, M.J, Mota, C.
Deposit date:2023-12-06
Release date:2024-07-24
Method:X-RAY DIFFRACTION (2.301 Å)
Cite:Substrate-dependent oxidative inactivation of a W-dependent formate dehydrogenase involving selenocysteine displacement
Chem Sci, 2024
8RCB
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BU of 8rcb by Molmil
W-formate dehydrogenase from Desulfovibrio vulgaris - Co-crystallized with Formate and Reoxidized by exposure to air (in a not degassed drop) for 34 min in the presence of Formate
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, DI(HYDROXYETHYL)ETHER, ...
Authors:Vilela-Alves, G, Manuel, R.R, Pereira, I.C, Romao, M.J, Mota, C.
Deposit date:2023-12-06
Release date:2024-07-24
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Substrate-dependent oxidative inactivation of a W-dependent formate dehydrogenase involving selenocysteine displacement
Chem Sci, 2024
8RC8
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BU of 8rc8 by Molmil
W-formate dehydrogenase from Desulfovibrio vulgaris - Co-crystallized with Formate and Exposed to air for 0 min
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, DI(HYDROXYETHYL)ETHER, ...
Authors:Vilela-Alves, G, Manuel, R.R, Pereira, I.C, Romao, M.J, Mota, C.
Deposit date:2023-12-06
Release date:2024-07-24
Method:X-RAY DIFFRACTION (2.005 Å)
Cite:Substrate-dependent oxidative inactivation of a W-dependent formate dehydrogenase involving selenocysteine displacement
Chem Sci, 2024
8RC9
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BU of 8rc9 by Molmil
W-formate dehydrogenase from Desulfovibrio vulgaris - Co-crystallized with Formate and Exposed to air for 2 h
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, Formate dehydrogenase, ...
Authors:Vilela-Alves, G, Manuel, R.R, Pereira, I.C, Romao, M.J, Mota, C.
Deposit date:2023-12-06
Release date:2024-07-24
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Substrate-dependent oxidative inactivation of a W-dependent formate dehydrogenase involving selenocysteine displacement
Chem Sci, 2024
8RCA
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BU of 8rca by Molmil
W-formate dehydrogenase from Desulfovibrio vulgaris - Co-crystallized with Formate and Reoxidized by exposure to air for 1 h in the absence of Formate
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, Formate dehydrogenase, ...
Authors:Vilela-Alves, G, Manuel, R.R, Pereira, I.C, Romao, M.J, Mota, C.
Deposit date:2023-12-06
Release date:2024-07-24
Method:X-RAY DIFFRACTION (1.664 Å)
Cite:Substrate-dependent oxidative inactivation of a W-dependent formate dehydrogenase involving selenocysteine displacement
Chem Sci, 2024
5CSB
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BU of 5csb by Molmil
The crystal structure of beta2-microglobulin D76N mutant at room temperature
Descriptor: Beta-2-microglobulin
Authors:de Rosa, M, Mota, C.S, de Sanctis, D, Bolognesi, M, Ricagno, S.
Deposit date:2015-07-23
Release date:2016-08-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.719 Å)
Cite:Conformational dynamics in crystals reveal the molecular bases for D76N beta-2 microglobulin aggregation propensity.
Nat Commun, 9, 2018
5CS7
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BU of 5cs7 by Molmil
The crystal structure of wt beta2-microglobulin at room temperature
Descriptor: Beta-2-microglobulin
Authors:de Rosa, M, Mota, C.S, de Sanctis, D, Bolognesi, M, Ricagno, S.
Deposit date:2015-07-23
Release date:2016-08-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Conformational dynamics in crystals reveal the molecular bases for D76N beta-2 microglobulin aggregation propensity.
Nat Commun, 9, 2018
6SDV
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BU of 6sdv by Molmil
W-formate dehydrogenase from Desulfovibrio vulgaris - Formate reduced form
Descriptor: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, DI(HYDROXYETHYL)ETHER, Formate dehydrogenase, ...
Authors:Oliveira, A.R, Mota, C, Mourato, C, Domingos, R.M, Santos, M.F.A, Gesto, D, Guigliarelli, B, Santos-Silva, T, Romao, M.J, Pereira, I.C.
Deposit date:2019-07-29
Release date:2020-03-11
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Towards the mechanistic understanding of enzymatic CO2 reduction
Acs Catalysis, 2020
6SDR
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BU of 6sdr by Molmil
W-formate dehydrogenase from Desulfovibrio vulgaris - Oxidized form
Descriptor: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, Formate dehydrogenase, alpha subunit, ...
Authors:Oliveira, A.R, Mota, C, Mourato, C, Domingos, R.M, Santos, M.F.A, Gesto, D, Guigliarelli, B, Santos-Silva, T, Romao, M.J, Pereira, I.C.
Deposit date:2019-07-29
Release date:2020-03-11
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Towards the mechanistic understanding of enzymatic CO2 reduction
Acs Catalysis, 2020
7PX0
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BU of 7px0 by Molmil
Drosophila melanogaster Aldehyde Oxidase 1
Descriptor: AMMONIUM ION, Aldehyde oxidase 1, DI(HYDROXYETHYL)ETHER, ...
Authors:Vilela-Alves, G, Mota, C, Romao, M.J.
Deposit date:2021-10-07
Release date:2022-11-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Drosophila melanogaster's Aldehyde Oxidase 1: The First Invertebrate AOX structure
To Be Published
8RCG
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BU of 8rcg by Molmil
W-formate dehydrogenase M405S from Desulfovibrio vulgaris
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, DI(HYDROXYETHYL)ETHER, ...
Authors:Vilela-Alves, G, Manuel, R.R, Pereira, I.C, Romao, M.J, Mota, C.
Deposit date:2023-12-06
Release date:2024-05-08
Last modified:2024-06-12
Method:X-RAY DIFFRACTION (2.005 Å)
Cite:Structural and biochemical characterization of the M405S variant of Desulfovibrio vulgaris formate dehydrogenase.
Acta Crystallogr.,Sect.F, 80, 2024

 

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数据于2024-07-24公开中

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