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PDB: 23 件

1WZ7
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Crystal structure of enhancer of rudimentary homologue (ERH)
分子名称: Enhancer of rudimentary homolog
著者Arai, R, Kukimoto-Niino, M, Uda-Tochio, H, Morita, S, Uchikubo-Kamo, T, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-02-26
公開日2005-05-03
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of an enhancer of rudimentary homolog (ERH) at 2.1 Angstroms resolution.
Protein Sci., 14, 2005
6LT5
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Lysozyme protected by alginate gel
分子名称: CHLORIDE ION, GLYCEROL, Lysozyme C, ...
著者Tomoike, F, Morita, S, Nagae, T, Okada, T.
登録日2020-01-21
公開日2021-01-27
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.32 Å)
主引用文献Post-crystallization protection of protein crystals
To Be Published
1L1W
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NMR structure of a SRP19 binding domain in human SRP RNA
分子名称: SRP19 binding domain of SRP RNA
著者Sakamoto, T, Morita, S, Tabata, K, Nakamura, K, Kawai, G.
登録日2002-02-20
公開日2002-05-22
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献Solution structure of a SRP19 binding domain in human SRP RNA.
J.Biochem.(Tokyo), 132, 2002
8HAK
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Cryo-EM structure of the p300 catalytic core bound to the H4K12acK16ac nucleosome, class 4 (4.5 angstrom resolution)
分子名称: DNA (180-mer), Histone H2A type 1-B/E, Histone H2B type 1-J, ...
著者Kikuchi, M, Morita, S, Wakamori, M, Shin, S, Uchikubo-Kamo, T, Shirouzu, M, Umehara, T.
登録日2022-10-26
公開日2023-05-17
最終更新日2023-07-26
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Epigenetic mechanisms to propagate histone acetylation by p300/CBP.
Nat Commun, 14, 2023
8HAM
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Cryo-EM structure of the CBP catalytic core bound to the H4K12acK16ac nucleosome, class 2
分子名称: CREB-binding protein, DNA (180-mer), Histone H2A type 1-B/E, ...
著者Kikuchi, M, Morita, S, Wakamori, M, Shin, S, Uchikubo-Kamo, T, Shirouzu, M, Umehara, T.
登録日2022-10-26
公開日2023-05-17
最終更新日2023-07-26
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Epigenetic mechanisms to propagate histone acetylation by p300/CBP.
Nat Commun, 14, 2023
8HAJ
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Cryo-EM structure of the p300 catalytic core bound to the H4K12acK16ac nucleosome, class 2 (4.8 angstrom resolution)
分子名称: DNA (180-mer), Histone H2A type 1-B/E, Histone H2B type 1-J, ...
著者Kikuchi, M, Morita, S, Wakamori, M, Shin, S, Uchikubo-Kamo, T, Shirouzu, M, Umehara, T.
登録日2022-10-26
公開日2023-05-17
最終更新日2023-07-26
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献Epigenetic mechanisms to propagate histone acetylation by p300/CBP.
Nat Commun, 14, 2023
8HAI
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Cryo-EM structure of the p300 catalytic core bound to the H4K12acK16ac nucleosome, class 1 (4.7 angstrom resolution)
分子名称: DNA (180-mer), Histone H2A type 1-B/E, Histone H2B type 1-J, ...
著者Kikuchi, M, Morita, S, Wakamori, M, Shin, S, Uchikubo-Kamo, T, Shirouzu, M, Umehara, T.
登録日2022-10-26
公開日2023-05-17
最終更新日2023-07-26
実験手法ELECTRON MICROSCOPY (4.7 Å)
主引用文献Epigenetic mechanisms to propagate histone acetylation by p300/CBP.
Nat Commun, 14, 2023
8HAL
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BU of 8hal by Molmil
Cryo-EM structure of the CBP catalytic core bound to the H4K12acK16ac nucleosome, class 1
分子名称: CREB-binding protein, DNA (180-mer), Histone H2A type 1-B/E, ...
著者Kikuchi, M, Morita, S, Wakamori, M, Shin, S, Uchikubo-Kamo, T, Shirouzu, M, Umehara, T.
登録日2022-10-26
公開日2023-05-17
最終更新日2023-07-26
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Epigenetic mechanisms to propagate histone acetylation by p300/CBP.
Nat Commun, 14, 2023
8HAG
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Cryo-EM structure of the p300 catalytic core bound to the H4K12acK16ac nucleosome, class 1 (3.2 angstrom resolution)
分子名称: DNA (180-mer), Histone H2A type 1-B/E, Histone H2B type 1-J, ...
著者Kikuchi, M, Morita, S, Wakamori, M, Shin, S, Uchikubo-Kamo, T, Shirouzu, M, Umehara, T.
登録日2022-10-26
公開日2023-05-17
最終更新日2023-07-26
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Epigenetic mechanisms to propagate histone acetylation by p300/CBP.
Nat Commun, 14, 2023
8HAN
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Cryo-EM structure of the CBP catalytic core bound to the H4K12acK16ac nucleosome, class 3
分子名称: CREB-binding protein, DNA (180-mer), Histone H2A type 1-B/E, ...
著者Kikuchi, M, Morita, S, Wakamori, M, Shin, S, Uchikubo-Kamo, T, Shirouzu, M, Umehara, T.
登録日2022-10-26
公開日2023-05-17
最終更新日2023-07-26
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Epigenetic mechanisms to propagate histone acetylation by p300/CBP.
Nat Commun, 14, 2023
8HAH
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BU of 8hah by Molmil
Cryo-EM structure of the p300 catalytic core bound to the H4K12acK16ac nucleosome, class 2 (3.9 angstrom resolution)
分子名称: DNA (180-mer), Histone H2A type 1-B/E, Histone H2B type 1-J, ...
著者Kikuchi, M, Morita, S, Wakamori, M, Shin, S, Uchikubo-Kamo, T, Shirouzu, M, Umehara, T.
登録日2022-10-26
公開日2023-05-17
最終更新日2023-07-26
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Epigenetic mechanisms to propagate histone acetylation by p300/CBP.
Nat Commun, 14, 2023
2YWK
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Crystal structure of RRM-domain derived from human putative RNA-binding protein 11
分子名称: Putative RNA-binding protein 11
著者Kawazoe, M, Takemoto, C, Kaminishi, T, Uchikubo-Kamo, T, Nishino, A, Morita, S, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-20
公開日2008-04-22
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Crystal structure of RRM-domain derived from human putative RNA-binding protein 11
To be Published
2CW9
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BU of 2cw9 by Molmil
Crystal structure of human Tim44 C-terminal domain
分子名称: PENTAETHYLENE GLYCOL, translocase of inner mitochondrial membrane
著者Handa, N, Kishishita, S, Morita, S, Kinoshita, Y, Nagano, Y, Uda, H, Terada, T, Uchikubo, T, Takemoto, C, Jin, Z, Chrzas, J, Chen, L, Liu, Z.-J, Wang, B.-C, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-06-17
公開日2005-12-17
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of the human Tim44 C-terminal domain in complex with pentaethylene glycol: ligand-bound form.
Acta Crystallogr.,Sect.D, 63, 2007
2CX0
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Crystal structure of a PUA domain (APE0525) from the Aeropyrum pernix K1 (sulfate complex)
分子名称: SULFATE ION, hypothetical protein APE0525
著者Mizohata, E, Morita, S, Nagano, K, Uda, H, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-06-27
公開日2005-12-27
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of a PUA domain (APE0525) from the Aeropyrum pernix K1 (sulfate complex)
To be Published
2CZ2
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BU of 2cz2 by Molmil
Crystal structure of glutathione transferase zeta 1-1 (maleylacetoacetate isomerase) from Mus musculus (form-1 crystal)
分子名称: GLUTATHIONE, GLYCEROL, Maleylacetoacetate isomerase
著者Mizohata, E, Morita, S, Kinoshita, Y, Nagano, K, Uda, H, Uchikubo, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-07-10
公開日2006-01-10
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Crystal structure of glutathione transferase zeta 1-1 (maleylacetoacetate isomerase) from Mus musculus (form-1 crystal)
To be Published
2CZ3
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BU of 2cz3 by Molmil
Crystal structure of glutathione transferase zeta 1-1 (maleylacetoacetate isomerase) from Mus musculus (form-2 crystal)
分子名称: Maleylacetoacetate isomerase
著者Mizohata, E, Morita, S, Kinoshita, Y, Nagano, K, Uda, H, Uchikubo, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-07-10
公開日2006-01-10
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of glutathione transferase zeta 1-1 (maleylacetoacetate isomerase) from Mus musculus (form-2 crystal)
To be Published
2CWN
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Crystal structure of mouse transaldolase
分子名称: Transaldolase
著者Handa, N, Arai, R, Nishino, A, Uchikubo, T, Takemoto, C, Morita, S, Kinoshita, Y, Nagano, Y, Uda, H, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-06-22
公開日2005-12-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of mouse transaldolase
To be Published
2CY4
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Crystal structure of phosphotyrosine binding (PTB) domain of epidermal growth factor receptor pathway substrate-8 (EPS8) related protein 1 from Mus musculus (form-1 crystal)
分子名称: CALCIUM ION, epidermal growth factor receptor pathway substrate 8-like protein 1
著者Mizohata, E, Hamana, H, Morita, S, Kinoshita, Y, Nagano, K, Uda, H, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-07-04
公開日2006-01-04
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Crystal structure of phosphotyrosine binding (PTB) domain of epidermal growth factor receptor pathway substrate-8 (EPS8) related protein 1 from Mus musculus (form-1 crystal)
To be Published
2CY5
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Crystal structure of phosphotyrosine binding (PTB) domain of epidermal growth factor receptor pathway substrate-8 (EPS8) related protein 1 from Mus musculus (form-2 crystal)
分子名称: CALCIUM ION, epidermal growth factor receptor pathway substrate 8-like protein 1
著者Mizohata, E, Hamana, H, Morita, S, Kinoshita, Y, Nagano, K, Uda, H, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-07-04
公開日2006-01-04
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of phosphotyrosine binding (PTB) domain of epidermal growth factor receptor pathway substrate-8 (EPS8) related protein 1 from Mus musculus (form-2 crystal)
To be Published
2CX1
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Crystal structure of a PUA domain (APE0525) from the Aeropyrum pernix K1 (tartrate complex)
分子名称: L(+)-TARTARIC ACID, hypothetical protein APE0525
著者Mizohata, E, Morita, S, Nagano, K, Uda, H, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-06-27
公開日2005-12-27
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of a PUA domain (APE0525) from the Aeropyrum pernix K1 (tartrate complex)
To be Published
3VGK
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Crystal structure of a ROK family glucokinase from Streptomyces griseus
分子名称: Glucokinase, SULFATE ION, ZINC ION
著者Miyazono, K, Tabei, N, Morita, S, Ohnishi, Y, Horinouchi, S, Tanokura, M.
登録日2011-08-15
公開日2011-12-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献Substrate recognition mechanism and substrate-dependent conformational changes of an ROK family glucokinase from Streptomyces griseus
J.Bacteriol., 194, 2012
3VGM
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Crystal structure of a ROK family glucokinase from Streptomyces griseus in complex with glucose
分子名称: Glucokinase, POTASSIUM ION, ZINC ION, ...
著者Miyazono, K, Tabei, N, Morita, S, Ohnishi, Y, Horinouchi, S, Tanokura, M.
登録日2011-08-15
公開日2011-12-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Substrate recognition mechanism and substrate-dependent conformational changes of an ROK family glucokinase from Streptomyces griseus
J.Bacteriol., 194, 2012
3VGL
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Crystal structure of a ROK family glucokinase from Streptomyces griseus in complex with glucose and AMPPNP
分子名称: Glucokinase, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, SODIUM ION, ...
著者Miyazono, K, Tabei, N, Morita, S, Ohnishi, Y, Horinouchi, S, Tanokura, M.
登録日2011-08-15
公開日2011-12-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Substrate recognition mechanism and substrate-dependent conformational changes of an ROK family glucokinase from Streptomyces griseus
J.Bacteriol., 194, 2012

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