2RO0
 
 | | Solution structure of the knotted tudor domain of the yeast histone acetyltransferase, Esa1 | | 分子名称: | Histone acetyltransferase ESA1 | | 著者 | Shimojo, H, Sano, N, Moriwaki, Y, Okuda, M, Horikoshi, M, Nishimura, Y. | | 登録日 | 2008-03-01 | | 公開日 | 2008-04-29 | | 最終更新日 | 2024-05-29 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Novel structural and functional mode of a knot essential for RNA binding activity of the Esa1 presumed chromodomain
J.Mol.Biol., 378, 2008
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2RNZ
 | | Solution structure of the presumed chromodomain of the yeast histone acetyltransferase, Esa1 | | 分子名称: | Histone acetyltransferase ESA1 | | 著者 | Shimojo, H, Sano, N, Moriwaki, Y, Okuda, M, Horikoshi, M, Nishimura, Y. | | 登録日 | 2008-03-01 | | 公開日 | 2008-04-29 | | 最終更新日 | 2024-05-29 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Novel structural and functional mode of a knot essential for RNA binding activity of the Esa1 presumed chromodomain
J.Mol.Biol., 378, 2008
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1BTC
 | | THREE-DIMENSIONAL STRUCTURE OF SOYBEAN BETA-AMYLASE DETERMINED AT 3.0 ANGSTROMS RESOLUTION: PRELIMINARY CHAIN TRACING OF THE COMPLEX WITH ALPHA-CYCLODEXTRIN | | 分子名称: | BETA-AMYLASE, BETA-MERCAPTOETHANOL, Cyclohexakis-(1-4)-(alpha-D-glucopyranose), ... | | 著者 | Mikami, B, Hehre, E.J, Sato, M, Katsube, Y, Hirose, M, Morita, Y, Sacchettini, J.C. | | 登録日 | 1993-02-18 | | 公開日 | 1993-10-31 | | 最終更新日 | 2020-07-29 | | 実験手法 | X-RAY DIFFRACTION (2 Å) | | 主引用文献 | The 2.0-A resolution structure of soybean beta-amylase complexed with alpha-cyclodextrin.
Biochemistry, 32, 1993
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3O0R
 | | Crystal structure of nitric oxide reductase from Pseudomonas aeruginosa in complex with antibody fragment | | 分子名称: | CALCIUM ION, FE (III) ION, HEME C, ... | | 著者 | Hino, T, Matsumoto, Y, Nagano, S, Sugimoto, H, Fukumori, Y, Murata, T, Iwata, S, Shiro, Y. | | 登録日 | 2010-07-20 | | 公開日 | 2010-12-29 | | 最終更新日 | 2024-10-30 | | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | | 主引用文献 | Structural basis of biological N2O generation by bacterial nitric oxide reductase
Science, 330, 2010
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1CCR
 | | STRUCTURE OF RICE FERRICYTOCHROME C AT 2.0 ANGSTROMS RESOLUTION | | 分子名称: | CYTOCHROME C, HEME C | | 著者 | Ochi, H, Hata, Y, Tanaka, N, Kakudo, M, Sakurai, T, Aihara, S, Morita, Y. | | 登録日 | 1983-03-14 | | 公開日 | 1983-04-21 | | 最終更新日 | 2021-03-03 | | 実験手法 | X-RAY DIFFRACTION (1.5 Å) | | 主引用文献 | Structure of rice ferricytochrome c at 2.0 A resolution.
J.Mol.Biol., 166, 1983
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1IRU
 | | Crystal Structure of the mammalian 20S proteasome at 2.75 A resolution | | 分子名称: | 20S proteasome, MAGNESIUM ION | | 著者 | Unno, M, Mizushima, T, Morimoto, Y, Tomisugi, Y, Tanaka, K, Yasuoka, N, Tsukihara, T. | | 登録日 | 2001-10-24 | | 公開日 | 2002-05-22 | | 最終更新日 | 2023-12-27 | | 実験手法 | X-RAY DIFFRACTION (2.75 Å) | | 主引用文献 | The structure of the mammalian 20S proteasome at 2.75 A resolution.
Structure, 10, 2002
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2OWF
 | | Crystal structure of PH0725 from Pyrococcus horikoshii OT3 | | 分子名称: | S-ADENOSYL-L-HOMOCYSTEINE, diphthine synthase | | 著者 | Sugahara, M, Morikawa, Y, Matsuura, Y, Shimada, H, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2007-02-16 | | 公開日 | 2007-08-21 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | | 主引用文献 | Crystal structure of PH0725 from Pyrococcus horikoshii OT3
To be Published
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2P2Y
 | | Crystal structure of TTHB049 from Thermus thermophilus HB8 | | 分子名称: | Alpha-ribazole-5'-phosphate phosphatase, CHLORIDE ION | | 著者 | Sugahara, M, Morikawa, Y, Taketa, M, Matsuura, Y, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2007-03-08 | | 公開日 | 2007-09-11 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (1.95 Å) | | 主引用文献 | Crystal structure of TTHB049 from Thermus thermophilus HB8
To be Published
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1LGY
 | | LIPASE II FROM RHIZOPUS NIVEUS | | 分子名称: | TRIACYLGLYCEROL LIPASE | | 著者 | Kohno, M, Funatsu, J, Mikami, B, Kugimiya, W, Matsuo, T, Morita, Y. | | 登録日 | 1996-05-23 | | 公開日 | 1996-12-23 | | 最終更新日 | 2024-10-30 | | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | | 主引用文献 | The crystal structure of lipase II from Rhizopus niveus at 2.2 A resolution.
J.Biochem.(Tokyo), 120, 1996
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2P30
 | | Crystal structure of TTHB049 from Thermus thermophilus HB8 | | 分子名称: | Alpha-ribazole-5'-phosphate phosphatase | | 著者 | Sugahara, M, Taketa, M, Morikawa, Y, Matsuura, Y, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2007-03-08 | | 公開日 | 2007-09-11 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (1.85 Å) | | 主引用文献 | Crystal structure of TTHB049 from Thermus thermophilus HB8
To be Published
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2PCA
 | | Crystal structure of PH0725 from Pyrococcus horikoshii OT3 | | 分子名称: | Probable diphthine synthase, S-ADENOSYL-L-HOMOCYSTEINE, SODIUM ION | | 著者 | Sugahara, M, Taketa, M, Morikawa, Y, Matsuura, Y, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2007-03-29 | | 公開日 | 2007-10-02 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (2 Å) | | 主引用文献 | Crystal structure of PH0725 from Pyrococcus horikoshii OT3
To be Published
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2P6M
 | | Crystal structure of TTHB049 from Thermus thermophilus HB8 | | 分子名称: | Alpha-ribazole-5'-phosphate phosphatase, GLYCEROL, SODIUM ION | | 著者 | Sugahara, M, Matsuura, Y, Morikawa, Y, Shimada, H, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2007-03-19 | | 公開日 | 2007-09-25 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | | 主引用文献 | Crystal structure of TTHB049 from Thermus thermophilus HB8
To be Published
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2P6D
 | | Crystal structure of PH0725 from Pyrococcus horikoshii OT3 | | 分子名称: | S-ADENOSYL-L-HOMOCYSTEINE, diphthine synthase | | 著者 | Yamamoto, H, Taketa, M, Morikawa, Y, Matsuura, Y, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2007-03-17 | | 公開日 | 2007-09-18 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | | 主引用文献 | Crystal structure of PH0725 from Pyrococcus horikoshii OT3
To be Published
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7X7O
 | | SARS-CoV-2 spike RBD in complex with neutralizing antibody UT28K | | 分子名称: | Spike protein S1, UT28K Fab, heavy chain, ... | | 著者 | Ozawa, T, Tani, H, Anraku, Y, Kita, S, Igarashi, E, Saga, Y, Inasaki, N, Kawasuji, H, Yamada, H, Sasaki, S, Somekawa, M, Sasaki, J, Hayakawa, Y, Yamamoto, Y, Morinaga, Y, Kurosawa, N, Isobe, M, Fukuhara, H, Maenaka, K, Hashiguchi, T, Kishi, H, Kitajima, I, Saito, S, Niimi, H. | | 登録日 | 2022-03-10 | | 公開日 | 2022-05-25 | | 最終更新日 | 2024-10-23 | | 実験手法 | X-RAY DIFFRACTION (3.75 Å) | | 主引用文献 | Novel super-neutralizing antibody UT28K is capable of protecting against infection from a wide variety of SARS-CoV-2 variants.
Mabs, 14, 2022
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2CVC
 | | Crystal structure of High-Molecular Weight Cytochrome c from Desulfovibrio vulgaris (Hildenborough) | | 分子名称: | HEME C, High-molecular-weight cytochrome c precursor | | 著者 | Suto, K, Sato, M, Shibata, N, Kitamura, M, Morimoto, Y, Takayama, Y, Ozawa, K, Akutsu, H, Higuchi, Y, Yasuoka, N. | | 登録日 | 2005-06-02 | | 公開日 | 2006-06-06 | | 最終更新日 | 2019-10-02 | | 実験手法 | X-RAY DIFFRACTION (2 Å) | | 主引用文献 | Structure of High-Molecular Weight Cytochrome c
To be Published
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3KMF
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2EK7
 | | Structural study of Project ID PH0725 from Pyrococcus horikoshii OT3 (L163M) | | 分子名称: | Probable diphthine synthase, S-ADENOSYL-L-HOMOCYSTEINE, SODIUM ION | | 著者 | Asada, Y, Taketa, M, Morikawa, Y, Matsuura, Y, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2007-03-22 | | 公開日 | 2007-09-25 | | 最終更新日 | 2024-05-29 | | 実験手法 | X-RAY DIFFRACTION (2 Å) | | 主引用文献 | Structural study of Project ID PH0725 from Pyrococcus horikoshii OT3 (L163M)
To be Published
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1EEX
 | | CRYSTAL STRUCTURE OF THE DIOL DEHYDRATASE-ADENINYLPENTYLCOBALAMIN COMPLEX FROM KLEBSIELLA OXYTOCA | | 分子名称: | CO-(ADENIN-9-YL-PENTYL)-COBALAMIN, POTASSIUM ION, PROPANEDIOL DEHYDRATASE, ... | | 著者 | Shibata, N, Masuda, J, Toraya, T, Morimoto, Y, Yasuoka, N. | | 登録日 | 2000-02-04 | | 公開日 | 2001-02-07 | | 最終更新日 | 2024-03-13 | | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | | 主引用文献 | How a protein generates a catalytic radical from coenzyme B(12): X-ray structure of a diol-dehydratase-adeninylpentylcobalamin complex.
Structure Fold.Des., 8, 2000
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2D2M
 | | Structure of an extracellular giant hemoglobin of the gutless beard worm Oligobrachia mashikoi | | 分子名称: | Giant hemoglobin, A1(b) globin chain, A2(a5) globin chain, ... | | 著者 | Numoto, N, Nakagawa, T, Kita, A, Sasayama, Y, Fukumori, Y, Miki, K. | | 登録日 | 2005-09-12 | | 公開日 | 2005-10-25 | | 最終更新日 | 2024-10-09 | | 実験手法 | X-RAY DIFFRACTION (2.85 Å) | | 主引用文献 | Structure of an extracellular giant hemoglobin of the gutless beard worm Oligobrachia mashikoi.
Proc.Natl.Acad.Sci.USA, 102, 2005
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1EGV
 | | CRYSTAL STRUCTURE OF THE DIOL DEHYDRATASE-ADENINYLPENTYLCOBALAMIN COMPLEX FROM KLEBSELLA OXYTOCA UNDER THE ILLUMINATED CONDITION. | | 分子名称: | CO-(ADENIN-9-YL-PENTYL)-COBALAMIN, POTASSIUM ION, PROPANEDIOL DEHYDRATASE, ... | | 著者 | Masuda, J, Shibata, N, Toraya, T, Morimoto, Y, Yasuoka, N. | | 登録日 | 2000-02-17 | | 公開日 | 2001-02-21 | | 最終更新日 | 2024-03-13 | | 実験手法 | X-RAY DIFFRACTION (1.75 Å) | | 主引用文献 | How a protein generates a catalytic radical from coenzyme B(12): X-ray structure of a diol-dehydratase-adeninylpentylcobalamin complex.
Structure Fold.Des., 8, 2000
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2D2N
 | | Structure of an extracellular giant hemoglobin of the gutless beard worm Oligobrachia mashikoi | | 分子名称: | Giant hemoglobin, A1(b) globin chain, A2(a5) globin chain, ... | | 著者 | Numoto, N, Nakagawa, T, Kita, A, Sasayama, Y, Fukumori, Y, Miki, K. | | 登録日 | 2005-09-12 | | 公開日 | 2005-10-25 | | 最終更新日 | 2024-10-23 | | 実験手法 | X-RAY DIFFRACTION (3.2 Å) | | 主引用文献 | Structure of an extracellular giant hemoglobin of the gutless beard worm Oligobrachia mashikoi.
Proc.Natl.Acad.Sci.USA, 102, 2005
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1EGM
 | | CRYSTAL STRUCTURE OF DIOL DEHYDRATASE-CYANOCOBALAMIN COMPLEX AT 100K. | | 分子名称: | CYANOCOBALAMIN, POTASSIUM ION, PROPANEDIOL DEHYDRATASE, ... | | 著者 | Masuda, J, Shibata, N, Toraya, T, Morimoto, Y, Yasuoka, N. | | 登録日 | 2000-02-15 | | 公開日 | 2000-09-20 | | 最終更新日 | 2024-02-07 | | 実験手法 | X-RAY DIFFRACTION (1.85 Å) | | 主引用文献 | How a protein generates a catalytic radical from coenzyme B(12): X-ray structure of a diol-dehydratase-adeninylpentylcobalamin complex.
Structure Fold.Des., 8, 2000
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2E84
 | | Crystal structure of High-Molecular Weight Cytochrome c from Desulfovibrio vulgaris (Miyazaki F) in the presence of zinc ion | | 分子名称: | High-molecular-weight cytochrome c, PROTOPORPHYRIN IX CONTAINING FE, SODIUM ION, ... | | 著者 | Shibata, N, Suto, K, Sato, M, Morimoto, Y, Kitamura, M, Higuchi, Y. | | 登録日 | 2007-01-17 | | 公開日 | 2008-01-15 | | 最終更新日 | 2024-03-13 | | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | | 主引用文献 | Structure of High-Molecular Weight Cytochrome c from Desulfovibrio vulgaris (Miyazaki F)
To be Published
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7VLD
 | | Oxy-deoxy intermediate of V2 hemoglobin at 69% oxygen saturation | | 分子名称: | CALCIUM ION, Extracellular A1 globin, Extracellular A2 globin, ... | | 著者 | Numoto, N, Onoda, S, Kawano, Y, Okumura, H, Baba, S, Fukumori, Y, Miki, K, Ito, N. | | 登録日 | 2021-10-02 | | 公開日 | 2022-05-18 | | 最終更新日 | 2024-10-23 | | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | | 主引用文献 | Structures of oxygen dissociation intermediates of 400 kDa V2 hemoglobin provide coarse snapshots of the protein allostery.
Biophys Physicobio., 19, 2022
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7VLF
 | | Oxy-deoxy intermediate of V2 hemoglobin at 26% oxygen saturation | | 分子名称: | CALCIUM ION, Extracellular A1 globin, Extracellular A2 globin, ... | | 著者 | Numoto, N, Onoda, S, Kawano, Y, Okumura, H, Baba, S, Fukumori, Y, Miki, K, Ito, N. | | 登録日 | 2021-10-02 | | 公開日 | 2022-05-18 | | 最終更新日 | 2023-11-29 | | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | | 主引用文献 | Structures of oxygen dissociation intermediates of 400 kDa V2 hemoglobin provide coarse snapshots of the protein allostery.
Biophys Physicobio., 19, 2022
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