8J5H
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8j5h by Molmil](/molmil-images/mine/8j5h) | Crystal structure of kinase AbmG in complex with 4'-hydroxy-4'-thiocytidine | Descriptor: | 4-azanyl-1-[(2~{R},3~{R},4~{S},5~{S})-5-(hydroxymethyl)-3,4,5-tris(oxidanyl)thiolan-2-yl]pyrimidin-2-one, Deoxyadenosine/deoxycytidine kinase, NITRATE ION | Authors: | Ushimaru, R, Mori, T, Liu, H.-w, Abe, I. | Deposit date: | 2023-04-22 | Release date: | 2024-04-24 | Method: | X-RAY DIFFRACTION (1.4 Å) | Cite: | Crystal structure of kinase AbmG in complex with 4'-hydroxy-4'-thiocytidine To Be Published
|
|
3A8Q
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 3a8q by Molmil](/molmil-images/mine/3a8q) | Low-resolution crystal structure of the Tiam2 PHCCEx domain | Descriptor: | T-lymphoma invasion and metastasis-inducing protein 2 | Authors: | Terawaki, S, Kitano, K, Mori, T, Zhai, Y, Higuchi, Y, Itoh, N, Watanabe, T, Kaibuchi, K, Hakoshima, T. | Deposit date: | 2009-10-07 | Release date: | 2009-11-24 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (3.2 Å) | Cite: | The PHCCEx domain of Tiam1/2 is a novel protein- and membrane-binding module Embo J., 29, 2010
|
|
3A8P
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 3a8p by Molmil](/molmil-images/mine/3a8p) | Crystal structure of the Tiam2 PHCCEx domain | Descriptor: | T-lymphoma invasion and metastasis-inducing protein 2 | Authors: | Terawaki, S, Kitano, K, Mori, T, Zhai, Y, Higuchi, Y, Itoh, N, Watanabe, T, Kaibuchi, K, Hakoshima, T. | Deposit date: | 2009-10-07 | Release date: | 2009-11-24 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | The PHCCEx domain of Tiam1/2 is a novel protein- and membrane-binding module Embo J., 29, 2010
|
|
3A8N
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 3a8n by Molmil](/molmil-images/mine/3a8n) | Crystal structure of the Tiam1 PHCCEx domain | Descriptor: | T-lymphoma invasion and metastasis-inducing protein 1 | Authors: | Terawaki, S, Kitano, K, Mori, T, Zhai, Y, Higuchi, Y, Itoh, N, Watanabe, T, Kaibuchi, K, Hakoshima, T. | Deposit date: | 2009-10-07 | Release date: | 2009-11-24 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (4.5 Å) | Cite: | The PHCCEx domain of Tiam1/2 is a novel protein- and membrane-binding module Embo J., 29, 2010
|
|
5B6K
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 5b6k by Molmil](/molmil-images/mine/5b6k) | |
7EEH
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 7eeh by Molmil](/molmil-images/mine/7eeh) | Selenomethionine labeled Fe(II)/(alpha)ketoglutarate-dependent dioxygenase TqaL | Descriptor: | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FE (III) ION, TqaL | Authors: | Bunno, R, Mori, T, Awakawa, T, Abe, I. | Deposit date: | 2021-03-18 | Release date: | 2021-05-26 | Last modified: | 2021-07-21 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Aziridine Formation by a Fe II / alpha-Ketoglutarate Dependent Oxygenase and 2-Aminoisobutyrate Biosynthesis in Fungi. Angew.Chem.Int.Ed.Engl., 60, 2021
|
|
7EVT
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 7evt by Molmil](/molmil-images/mine/7evt) | Crystal structure of the N-terminal degron-truncated human glutamine synthetase | Descriptor: | Glutamine synthetase | Authors: | Chek, M.F, Kim, S.Y, Mori, T, Hakoshima, T. | Deposit date: | 2021-05-22 | Release date: | 2021-11-10 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (2.95 Å) | Cite: | Crystal structure of N-terminal degron-truncated human glutamine synthetase. Acta Crystallogr.,Sect.F, 77, 2021
|
|
7DCH
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 7dch by Molmil](/molmil-images/mine/7dch) | Alpha-glucosidase from Weissella cibaria BBK-1 bound with acarbose | Descriptor: | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, Alpha-glycosidase, ... | Authors: | Krusong, K, Wangpaiboon, K, Kim, S, Mori, T, Hakoshima, T. | Deposit date: | 2020-10-26 | Release date: | 2021-08-11 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.692 Å) | Cite: | A GH13 alpha-glucosidase from Weissella cibaria uncommonly acts on short-chain maltooligosaccharides. Acta Crystallogr D Struct Biol, 77, 2021
|
|
7D9C
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 7d9c by Molmil](/molmil-images/mine/7d9c) | Alpha-glucosidase from Weissella cibaria BBK-1 bound with maltose | Descriptor: | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Alpha-glycosidase, CALCIUM ION, ... | Authors: | Krusong, K, Wangpaiboon, K, Kim, S, Mori, T, Hakoshima, T. | Deposit date: | 2020-10-13 | Release date: | 2021-08-11 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.36 Å) | Cite: | A GH13 alpha-glucosidase from Weissella cibaria uncommonly acts on short-chain maltooligosaccharides. Acta Crystallogr D Struct Biol, 77, 2021
|
|
7D9B
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 7d9b by Molmil](/molmil-images/mine/7d9b) | Crystal structure of alpha-glucosidase | Descriptor: | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Alpha-glycosidase, CALCIUM ION, ... | Authors: | Krusong, K, Wangpaiboon, K, Kim, S, Mori, T, Hakoshima, T. | Deposit date: | 2020-10-12 | Release date: | 2021-08-11 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.58 Å) | Cite: | A GH13 alpha-glucosidase from Weissella cibaria uncommonly acts on short-chain maltooligosaccharides. Acta Crystallogr D Struct Biol, 77, 2021
|
|
7DCG
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 7dcg by Molmil](/molmil-images/mine/7dcg) | Alpha-glucosidase from Weissella cibaria BBK-1 bound with maltotriose | Descriptor: | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Alpha-glycosidase, CALCIUM ION, ... | Authors: | Krusong, K, Wangpaiboon, K, Kim, S, Mori, T, Hakoshima, T. | Deposit date: | 2020-10-26 | Release date: | 2021-08-11 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.53 Å) | Cite: | A GH13 alpha-glucosidase from Weissella cibaria uncommonly acts on short-chain maltooligosaccharides. Acta Crystallogr D Struct Biol, 77, 2021
|
|
7EHI
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 7ehi by Molmil](/molmil-images/mine/7ehi) | Crystal structure of covalent maltosyl-alpha-glucosidase intermediate | Descriptor: | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, GLYCEROL, ... | Authors: | Krusong, K, Wangpaiboon, K, Kim, S, Mori, T, Hakoshima, T. | Deposit date: | 2021-03-29 | Release date: | 2021-08-11 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.69 Å) | Cite: | A GH13 alpha-glucosidase from Weissella cibaria uncommonly acts on short-chain maltooligosaccharides. Acta Crystallogr D Struct Biol, 77, 2021
|
|
7EHH
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 7ehh by Molmil](/molmil-images/mine/7ehh) | Crystal structure of alpha-glucosidase from Weissella cibaria BKK1 in complex with maltose | Descriptor: | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, GLYCEROL, ... | Authors: | Krusong, K, Wangpaiboon, K, Kim, S, Mori, T, Hakoshima, T. | Deposit date: | 2021-03-29 | Release date: | 2021-08-11 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | A GH13 alpha-glucosidase from Weissella cibaria uncommonly acts on short-chain maltooligosaccharides. Acta Crystallogr D Struct Biol, 77, 2021
|
|
7FCB
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 7fcb by Molmil](/molmil-images/mine/7fcb) | SptF 9 residues truncated mutant | Descriptor: | 2-oxoglutarate/Fe(II)-dependent dioxygenase SptF, FE (II) ION, N-OXALYLGLYCINE | Authors: | Hui, T, Mori, T, Abe, I. | Deposit date: | 2021-07-14 | Release date: | 2022-04-20 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.4 Å) | Cite: | Molecular insights into the unusually promiscuous and catalytically versatile Fe(II)/ alpha-ketoglutarate-dependent oxygenase SptF. Nat Commun, 13, 2022
|
|
7DE2
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 7de2 by Molmil](/molmil-images/mine/7de2) | iron and alpha-ketoglutarate-dependent endoperoxidase NvfI | Descriptor: | 2-OXOGLUTARIC ACID, FE (III) ION, NvfI, ... | Authors: | Zhai, R, Mori, T, Abe, I. | Deposit date: | 2020-11-01 | Release date: | 2021-07-14 | Last modified: | 2024-05-29 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Molecular insights into the endoperoxide formation by Fe(II)/ alpha-KG-dependent oxygenase NvfI. Nat Commun, 12, 2021
|
|
7DMB
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 7dmb by Molmil](/molmil-images/mine/7dmb) | |
7EYR
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 7eyr by Molmil](/molmil-images/mine/7eyr) | Fe(II)/(alpha)ketoglutarate-dependent dioxygenase SptF apo | Descriptor: | 2-oxoglutarate/Fe(II)-dependent dioxygenase SptF, FE (II) ION | Authors: | Tao, H, Mori, T, Abe, I. | Deposit date: | 2021-06-01 | Release date: | 2022-04-20 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (2.12 Å) | Cite: | Molecular insights into the unusually promiscuous and catalytically versatile Fe(II)/ alpha-ketoglutarate-dependent oxygenase SptF. Nat Commun, 13, 2022
|
|
7EYW
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 7eyw by Molmil](/molmil-images/mine/7eyw) | Fe(II)/(alpha)ketoglutarate-dependent dioxygenase SptF with terretonin C | Descriptor: | 2-oxoglutarate/Fe(II)-dependent dioxygenase SptF, FE (II) ION, N-OXALYLGLYCINE, ... | Authors: | Tao, H, Mori, T, Abe, I. | Deposit date: | 2021-06-01 | Release date: | 2022-04-20 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Molecular insights into the unusually promiscuous and catalytically versatile Fe(II)/ alpha-ketoglutarate-dependent oxygenase SptF. Nat Commun, 13, 2022
|
|
7EYS
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 7eys by Molmil](/molmil-images/mine/7eys) | Complex structure of SptF with Fe, alpha-ketoglutarate, and andiconin D | Descriptor: | 2-OXOGLUTARIC ACID, 2-oxoglutarate/Fe(II)-dependent dioxygenase SptF, Andiconin D, ... | Authors: | Tao, H, Mori, T, Abe, I. | Deposit date: | 2021-06-01 | Release date: | 2022-04-20 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.95 Å) | Cite: | Molecular insights into the unusually promiscuous and catalytically versatile Fe(II)/ alpha-ketoglutarate-dependent oxygenase SptF. Nat Commun, 13, 2022
|
|
7F0Y
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 7f0y by Molmil](/molmil-images/mine/7f0y) | |
7F13
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 7f13 by Molmil](/molmil-images/mine/7f13) | Crystal structure of isomerase Dcr3 | Descriptor: | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Dcr3 | Authors: | Yang, J, Mori, T, Abe, I. | Deposit date: | 2021-06-07 | Release date: | 2022-04-20 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (2.15 Å) | Cite: | Structural Basis for Isomerization Reactions in Fungal Tetrahydroxanthone Biosynthesis and Diversification. Angew.Chem.Int.Ed.Engl., 60, 2021
|
|
7F11
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 7f11 by Molmil](/molmil-images/mine/7f11) | Crystal structure of NsrQ M128I in complex with substrate analogue 7 | Descriptor: | NsrQ, methyl 2-[2,6-bis(oxidanyl)phenyl]carbonyl-5-methyl-3,6-bis(oxidanyl)benzoate | Authors: | Yang, J, Mori, T, Abe, I. | Deposit date: | 2021-06-07 | Release date: | 2022-04-20 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | Structural Basis for Isomerization Reactions in Fungal Tetrahydroxanthone Biosynthesis and Diversification. Angew.Chem.Int.Ed.Engl., 60, 2021
|
|
7EYT
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 7eyt by Molmil](/molmil-images/mine/7eyt) | Fe(II)/(alpha)ketoglutarate-dependent dioxygenase SptF with andilesin C and NOG | Descriptor: | 2-oxoglutarate/Fe(II)-dependent dioxygenase SptF, Andilesin C, FE (II) ION, ... | Authors: | Tao, H, Mori, T, Abe, I. | Deposit date: | 2021-06-01 | Release date: | 2022-04-20 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Molecular insights into the unusually promiscuous and catalytically versatile Fe(II)/ alpha-ketoglutarate-dependent oxygenase SptF. Nat Commun, 13, 2022
|
|
7EYU
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 7eyu by Molmil](/molmil-images/mine/7eyu) | Fe(II)/(alpha)ketoglutarate-dependent dioxygenase SptF-N65T mutant with andiconin D | Descriptor: | 2-oxoglutarate/Fe(II)-dependent dioxygenase SptF, Andiconin D, FE (II) ION, ... | Authors: | Tao, H, Mori, T, Abe, I. | Deposit date: | 2021-06-01 | Release date: | 2022-04-20 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (2.05 Å) | Cite: | Molecular insights into the unusually promiscuous and catalytically versatile Fe(II)/ alpha-ketoglutarate-dependent oxygenase SptF. Nat Commun, 13, 2022
|
|
7F14
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 7f14 by Molmil](/molmil-images/mine/7f14) | |