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PDB: 91 件

4H4V
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BU of 4h4v by Molmil
Crystal Structure of Ferredoxin reductase, BphA4 E175C/T176R/Q177G mutant (oxidized form)
分子名称: Biphenyl dioxygenase ferredoxin reductase subunit, FLAVIN-ADENINE DINUCLEOTIDE, FORMIC ACID, ...
著者Nishizawa, A, Harada, A, Senda, M, Tachihara, Y, Muramatsu, D, Kishigami, S, Mori, S, Sugiyama, K, Senda, T, Kimura, S.
登録日2012-09-18
公開日2013-10-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Random Mutagenesis with the Project Assessment for Complete Conversion of Co-Factor Specificity of a Ferredoxin Reductase BphA4
To be Published
4H4Z
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BU of 4h4z by Molmil
Crystal Structure of Ferredoxin reductase, BphA4 E175Q/T176R/Q177G mutant (oxidized form)
分子名称: Biphenyl dioxygenase ferredoxin reductase subunit, FLAVIN-ADENINE DINUCLEOTIDE, FORMIC ACID, ...
著者Nishizawa, A, Harada, A, Senda, M, Tachihara, Y, Muramatsu, D, Kishigami, S, Mori, S, Sugiyama, K, Senda, T, Kimura, S.
登録日2012-09-18
公開日2013-10-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Random Mutagenesis with the Project Assessment for Complete Conversion of Co-Factor Specificity of a Ferredoxin Reductase BphA4
To be Published
4H50
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BU of 4h50 by Molmil
Crystal Structure of Ferredoxin reductase, BphA4 E175Q/T1776R/Q177G mutant (reduced form)
分子名称: Biphenyl dioxygenase ferredoxin reductase subunit, FLAVIN-ADENINE DINUCLEOTIDE, FORMIC ACID, ...
著者Nishizawa, A, Harada, A, Senda, M, Tachihara, Y, Muramatsu, D, Kishigami, S, Mori, S, Sugiyama, K, Senda, T, Kimura, S.
登録日2012-09-18
公開日2013-10-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Random Mutagenesis with the Project Assessment for Complete Conversion of Co-Factor Specificity of a Ferredoxin Reductase BphA4
To be Published
4H4Q
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BU of 4h4q by Molmil
Crystal Structure of Ferredoxin reductase, BphA4 E175Q/Q177K (reduced form)
分子名称: Biphenyl dioxygenase ferredoxin reductase subunit, FLAVIN-ADENINE DINUCLEOTIDE, FORMIC ACID
著者Nishizawa, A, Harada, A, Senda, M, Tachihara, Y, Muramatsu, D, Kishigami, S, Mori, S, Sugiyama, K, Senda, T, Kimura, S.
登録日2012-09-18
公開日2013-10-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Random Mutagenesis with the Project Assessment for Complete Conversion of Co-Factor Specificity of a Ferredoxin Reductase BphA4
To be Published
4H4Y
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BU of 4h4y by Molmil
Crystal Structure of Ferredoxin reductase, BphA4 E175A/T176R/Q177G mutant (reduced form)
分子名称: Biphenyl dioxygenase ferredoxin reductase subunit, FLAVIN-ADENINE DINUCLEOTIDE, FORMIC ACID, ...
著者Nishizawa, A, Harada, A, Senda, M, Tachihara, Y, Muramatsu, D, Kishigami, S, Mori, S, Sugiyama, K, Senda, T, Kimura, S.
登録日2012-09-18
公開日2013-10-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Random Mutagenesis with the Project Assessment for Complete Conversion of Co-Factor Specificity of a Ferredoxin Reductase BphA4
To be Published
4H4S
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BU of 4h4s by Molmil
Crystal Structure of Ferredoxin reductase, BphA4 E175C/Q177G mutant (reduced form)
分子名称: Biphenyl dioxygenase ferredoxin reductase subunit, FLAVIN-ADENINE DINUCLEOTIDE, FORMIC ACID, ...
著者Nishizawa, A, Harada, A, Senda, M, Tachihara, Y, Muramatsu, D, Kishigami, S, Mori, S, Sugiyama, K, Senda, T, Kimura, S.
登録日2012-09-18
公開日2013-10-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Random Mutagenesis with the Project Assessment for Complete Conversion of Co-Factor Specificity of a Ferredoxin Reductase BphA4
To be Published
4H4W
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BU of 4h4w by Molmil
Crystal Structure of Ferredoxin reductase, BphA4 E175C/T176R/Q177G mutant (reduced form)
分子名称: Biphenyl dioxygenase ferredoxin reductase subunit, FLAVIN-ADENINE DINUCLEOTIDE, FORMIC ACID, ...
著者Nishizawa, A, Harada, A, Senda, M, Tachihara, Y, Muramatsu, D, Kishigami, S, Mori, S, Sugiyama, K, Senda, T, Kimura, S.
登録日2012-09-18
公開日2013-10-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Random Mutagenesis with the Project Assessment for Complete Conversion of Co-Factor Specificity of a Ferredoxin Reductase BphA4
To be Published
4H4U
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BU of 4h4u by Molmil
Crystal Structure of Ferredoxin reductase, BphA4 T176R mutant (reduced form)
分子名称: Biphenyl dioxygenase ferredoxin reductase subunit, FLAVIN-ADENINE DINUCLEOTIDE, FORMIC ACID, ...
著者Nishizawa, A, Harada, A, Senda, M, Tachihara, Y, Muramatsu, D, Kishigami, S, Mori, S, Sugiyama, K, Senda, T, Kimura, S.
登録日2012-09-18
公開日2013-10-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Random Mutagenesis with the Project Assessment for Complete Conversion of Co-Factor Specificity of a Ferredoxin Reductase BphA4
To be Published
4H4T
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BU of 4h4t by Molmil
Crystal Structure of Ferredoxin reductase, BphA4 T176R mutant (oxidized form)
分子名称: Biphenyl dioxygenase ferredoxin reductase subunit, FLAVIN-ADENINE DINUCLEOTIDE, FORMIC ACID, ...
著者Nishizawa, A, Harada, A, Senda, M, Tachihara, Y, Muramatsu, D, Kishigami, S, Mori, S, Sugiyama, K, Senda, T, Kimura, S.
登録日2012-09-18
公開日2013-10-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Random Mutagenesis with the Project Assessment for Complete Conversion of Co-Factor Specificity of a Ferredoxin Reductase BphA4
To be Published
4H4R
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BU of 4h4r by Molmil
Crystal Structure of Ferredoxin reductase, BphA4 E175C/Q177G mutant (oxidized form)
分子名称: Biphenyl dioxygenase ferredoxin reductase subunit, FLAVIN-ADENINE DINUCLEOTIDE, FORMIC ACID, ...
著者Nishizawa, A, Harada, A, Senda, M, Tachihara, Y, Muramatsu, D, Kishigami, S, Mori, S, Sugiyama, K, Senda, T, Kimura, S.
登録日2012-09-18
公開日2013-10-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Random Mutagenesis with the Project Assessment for Complete Conversion of Co-Factor Specificity of a Ferredoxin Reductase BphA4
To be Published
5WMM
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BU of 5wmm by Molmil
Crystal structure of an adenylation domain interrupted by a methylation domain (AMA4) from nonribosomal peptide synthetase TioS
分子名称: (2S)-2-amino-3-methylbutanoyl (2S,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl hydrogen (S)-phosphate, CALCIUM ION, CHLORIDE ION, ...
著者Pang, A.H, Mori, S, Garneau-Tsodikova, S, Tsodikov, O.V.
登録日2017-07-30
公開日2018-03-14
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural basis for backbone N-methylation by an interrupted adenylation domain.
Nat. Chem. Biol., 14, 2018
3VPE
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BU of 3vpe by Molmil
Crystal Structure of Metallo-beta-Lactamase SMB-1
分子名称: ACETATE ION, GLYCEROL, Metallo-beta-lactamase, ...
著者Wachino, J, Yamaguchi, Y, Mori, S, Arakawa, Y, Shibayama, K.
登録日2012-02-29
公開日2013-02-13
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural Insights into the Subclass B3 Metallo-beta-Lactamase SMB-1 and the Mode of Inhibition by the Common Metallo- -Lactamase Inhibitor Mercaptoacetate
Antimicrob.Agents Chemother., 57, 2013
3VQZ
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BU of 3vqz by Molmil
Crystal structure of metallo-beta-lactamase, SMB-1, in a complex with mercaptoacetic acid
分子名称: Metallo-beta-lactamase, SODIUM ION, SULFANYLACETIC ACID, ...
著者Wachino, J, Yamaguchi, Y, Mori, S, Arakawa, Y, Shibayama, K.
登録日2012-04-02
公開日2013-02-13
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural Insights into the Subclass B3 Metallo-beta-Lactamase SMB-1 and the Mode of Inhibition by the Common Metallo- -Lactamase Inhibitor Mercaptoacetate
Antimicrob.Agents Chemother., 57, 2013
1MBE
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BU of 1mbe by Molmil
MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 1
分子名称: MYB PROTO-ONCOGENE PROTEIN
著者Ogata, K, Morikawa, S, Nakamura, H, Hojo, H, Yoshimura, S, Zhang, R, Aimoto, S, Ametani, Y, Hirata, Z, Sarai, A, Ishii, S, Nishimura, Y.
登録日1995-05-19
公開日1995-07-31
最終更新日2024-06-05
実験手法SOLUTION NMR
主引用文献Comparison of the free and DNA-complexed forms of the DNA-binding domain from c-Myb.
Nat.Struct.Biol., 2, 1995
1MBJ
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BU of 1mbj by Molmil
MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 3
分子名称: MYB PROTO-ONCOGENE PROTEIN
著者Ogata, K, Morikawa, S, Nakamura, H, Hojo, H, Yoshimura, S, Zhang, R, Aimoto, S, Ametani, Y, Hirata, Z, Sarai, A, Ishii, S, Nishimura, Y.
登録日1995-05-19
公開日1995-07-31
最終更新日2024-06-05
実験手法SOLUTION NMR
主引用文献Comparison of the free and DNA-complexed forms of the DNA-binding domain from c-Myb.
Nat.Struct.Biol., 2, 1995
1MBG
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BU of 1mbg by Molmil
MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 2
分子名称: MYB PROTO-ONCOGENE PROTEIN
著者Ogata, K, Morikawa, S, Nakamura, H, Hojo, H, Yoshimura, S, Zhang, R, Aimoto, S, Ametani, Y, Hirata, Z, Sarai, A, Ishii, S, Nishimura, Y.
登録日1995-05-19
公開日1995-07-31
最終更新日2024-06-05
実験手法SOLUTION NMR
主引用文献Comparison of the free and DNA-complexed forms of the DNA-binding domain from c-Myb.
Nat.Struct.Biol., 2, 1995
1MBK
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BU of 1mbk by Molmil
MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 3
分子名称: MYB PROTO-ONCOGENE PROTEIN
著者Ogata, K, Morikawa, S, Nakamura, H, Hojo, H, Yoshimura, S, Zhang, R, Aimoto, S, Ametani, Y, Hirata, Z, Sarai, A, Ishii, S, Nishimura, Y.
登録日1995-05-19
公開日1995-07-31
最終更新日2024-06-05
実験手法SOLUTION NMR
主引用文献Comparison of the free and DNA-complexed forms of the DNA-binding domain from c-Myb.
Nat.Struct.Biol., 2, 1995
8HAL
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BU of 8hal by Molmil
Cryo-EM structure of the CBP catalytic core bound to the H4K12acK16ac nucleosome, class 1
分子名称: CREB-binding protein, DNA (180-mer), Histone H2A type 1-B/E, ...
著者Kikuchi, M, Morita, S, Wakamori, M, Shin, S, Uchikubo-Kamo, T, Shirouzu, M, Umehara, T.
登録日2022-10-26
公開日2023-05-17
最終更新日2023-07-26
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Epigenetic mechanisms to propagate histone acetylation by p300/CBP.
Nat Commun, 14, 2023
8HAG
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BU of 8hag by Molmil
Cryo-EM structure of the p300 catalytic core bound to the H4K12acK16ac nucleosome, class 1 (3.2 angstrom resolution)
分子名称: DNA (180-mer), Histone H2A type 1-B/E, Histone H2B type 1-J, ...
著者Kikuchi, M, Morita, S, Wakamori, M, Shin, S, Uchikubo-Kamo, T, Shirouzu, M, Umehara, T.
登録日2022-10-26
公開日2023-05-17
最終更新日2023-07-26
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Epigenetic mechanisms to propagate histone acetylation by p300/CBP.
Nat Commun, 14, 2023
8HAH
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BU of 8hah by Molmil
Cryo-EM structure of the p300 catalytic core bound to the H4K12acK16ac nucleosome, class 2 (3.9 angstrom resolution)
分子名称: DNA (180-mer), Histone H2A type 1-B/E, Histone H2B type 1-J, ...
著者Kikuchi, M, Morita, S, Wakamori, M, Shin, S, Uchikubo-Kamo, T, Shirouzu, M, Umehara, T.
登録日2022-10-26
公開日2023-05-17
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Epigenetic mechanisms to propagate histone acetylation by p300/CBP.
Nat Commun, 14, 2023
8HAM
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BU of 8ham by Molmil
Cryo-EM structure of the CBP catalytic core bound to the H4K12acK16ac nucleosome, class 2
分子名称: CREB-binding protein, DNA (180-mer), Histone H2A type 1-B/E, ...
著者Kikuchi, M, Morita, S, Wakamori, M, Shin, S, Uchikubo-Kamo, T, Shirouzu, M, Umehara, T.
登録日2022-10-26
公開日2023-05-17
最終更新日2023-07-26
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Epigenetic mechanisms to propagate histone acetylation by p300/CBP.
Nat Commun, 14, 2023
8HAI
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BU of 8hai by Molmil
Cryo-EM structure of the p300 catalytic core bound to the H4K12acK16ac nucleosome, class 1 (4.7 angstrom resolution)
分子名称: DNA (180-mer), Histone H2A type 1-B/E, Histone H2B type 1-J, ...
著者Kikuchi, M, Morita, S, Wakamori, M, Shin, S, Uchikubo-Kamo, T, Shirouzu, M, Umehara, T.
登録日2022-10-26
公開日2023-05-17
最終更新日2023-07-26
実験手法ELECTRON MICROSCOPY (4.7 Å)
主引用文献Epigenetic mechanisms to propagate histone acetylation by p300/CBP.
Nat Commun, 14, 2023
8HAN
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BU of 8han by Molmil
Cryo-EM structure of the CBP catalytic core bound to the H4K12acK16ac nucleosome, class 3
分子名称: CREB-binding protein, DNA (180-mer), Histone H2A type 1-B/E, ...
著者Kikuchi, M, Morita, S, Wakamori, M, Shin, S, Uchikubo-Kamo, T, Shirouzu, M, Umehara, T.
登録日2022-10-26
公開日2023-05-17
最終更新日2023-07-26
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Epigenetic mechanisms to propagate histone acetylation by p300/CBP.
Nat Commun, 14, 2023
8HAJ
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BU of 8haj by Molmil
Cryo-EM structure of the p300 catalytic core bound to the H4K12acK16ac nucleosome, class 2 (4.8 angstrom resolution)
分子名称: DNA (180-mer), Histone H2A type 1-B/E, Histone H2B type 1-J, ...
著者Kikuchi, M, Morita, S, Wakamori, M, Shin, S, Uchikubo-Kamo, T, Shirouzu, M, Umehara, T.
登録日2022-10-26
公開日2023-05-17
最終更新日2023-07-26
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献Epigenetic mechanisms to propagate histone acetylation by p300/CBP.
Nat Commun, 14, 2023
8HAK
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BU of 8hak by Molmil
Cryo-EM structure of the p300 catalytic core bound to the H4K12acK16ac nucleosome, class 4 (4.5 angstrom resolution)
分子名称: DNA (180-mer), Histone H2A type 1-B/E, Histone H2B type 1-J, ...
著者Kikuchi, M, Morita, S, Wakamori, M, Shin, S, Uchikubo-Kamo, T, Shirouzu, M, Umehara, T.
登録日2022-10-26
公開日2023-05-17
最終更新日2023-07-26
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Epigenetic mechanisms to propagate histone acetylation by p300/CBP.
Nat Commun, 14, 2023

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