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PDB: 79 results

1S4S
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Reaction Intermediate in the Photocycle of PYP, intermediate occupied between 100 micro-seconds to 5 milli-seconds
Descriptor: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
Authors:Schmidt, M, Pahl, R, Srajer, V, Anderson, S, Ren, Z, Ihee, H, Rajagopal, S, Moffat, K.
Deposit date:2004-01-17
Release date:2004-04-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Protein kinetics: Structures of intermediates and reaction mechanism from time-resolved x-ray data
Proc.Natl.Acad.Sci.USA, 101, 2004
3ICB
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BU of 3icb by Molmil
THE REFINED STRUCTURE OF VITAMIN D-DEPENDENT CALCIUM-BINDING PROTEIN FROM BOVINE INTESTINE. MOLECULAR DETAILS, ION BINDING, AND IMPLICATIONS FOR THE STRUCTURE OF OTHER CALCIUM-BINDING PROTEINS
Descriptor: CALCIUM ION, CALCIUM-BINDING PROTEIN, SULFATE ION
Authors:Szebenyi, D.M.E, Moffat, K.
Deposit date:1986-09-09
Release date:1986-10-24
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The refined structure of vitamin D-dependent calcium-binding protein from bovine intestine. Molecular details, ion binding, and implications for the structure of other calcium-binding proteins.
J.Biol.Chem., 261, 1986
1S1Y
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Photoactivated chromophore conformation in Photoactive Yellow Protein (E46Q mutant) from 10 microseconds to 3 milliseconds
Descriptor: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
Authors:Anderson, S, Srajer, V, Pahl, R, Rajagopal, S, Schotte, F, Anfinrud, P, Wulff, M, Moffat, K.
Deposit date:2004-01-07
Release date:2004-06-15
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Chromophore conformation and the evolution of tertiary structural changes in photoactive yellow protein
Structure, 12, 2004
1S1Z
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Photoactivated chromophore conformation in Photoactive Yellow Protein (E46Q mutant) from 10 to 500 nanoseconds
Descriptor: 4'-HYDROXYCINNAMIC ACID, Photoactive Yellow Protein
Authors:Anderson, S, Srajer, V, Pahl, R, Rajagopal, S, Schotte, F, Anfinrud, P, Wulff, M, Moffat, K.
Deposit date:2004-01-07
Release date:2004-06-15
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Chromophore conformation and the evolution of tertiary structural changes in photoactive yellow protein
Structure, 12, 2004
1S4R
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BU of 1s4r by Molmil
Structure of a reaction intermediate in the photocycle of PYP extracted by a SVD-driven analysis
Descriptor: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
Authors:Schmidt, M, Pahl, R, Srajer, V, Anderson, S, Ren, Z, Ihee, H, Rajagopal, S, Moffat, K.
Deposit date:2004-01-17
Release date:2004-04-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Protein kinetics: Structures of intermediates and reaction mechanism from time-resolved x-ray data
Proc.Natl.Acad.Sci.USA, 101, 2004
4G7L
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BU of 4g7l by Molmil
Crystal Structure of rat Heme oxygenase-1 in complex with Heme and O2
Descriptor: FORMIC ACID, Heme oxygenase 1, OXYGEN MOLECULE, ...
Authors:Sugishima, M, Moffat, K, Noguchi, M.
Deposit date:2012-07-20
Release date:2012-10-31
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Discrimination between CO and O(2) in heme oxygenase: comparison of static structures and dynamic conformation changes following CO photolysis.
Biochemistry, 51, 2012
4G99
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Rat Heme Oxygenase-1 in complex with Heme and CO at 100 K after warming to 160 K
Descriptor: CARBON MONOXIDE, FORMIC ACID, Heme oxygenase 1, ...
Authors:Sugishima, M, Moffat, K, Noguchi, M.
Deposit date:2012-07-23
Release date:2012-10-31
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Discrimination between CO and O(2) in heme oxygenase: comparison of static structures and dynamic conformation changes following CO photolysis.
Biochemistry, 51, 2012
4G8W
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Rat Heme Oxygenase-1 in complex with Heme and O2 with 13 hr illumination: Laser on
Descriptor: FORMIC ACID, Heme oxygenase 1, OXYGEN MOLECULE, ...
Authors:Sugishima, M, Moffat, K, Noguchi, M.
Deposit date:2012-07-23
Release date:2012-10-31
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Discrimination between CO and O(2) in heme oxygenase: comparison of static structures and dynamic conformation changes following CO photolysis.
Biochemistry, 51, 2012
4G7T
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Rat Heme Oxygenase-1 in complex with Heme and CO with 1 hr Illumination: Laser on
Descriptor: CARBON MONOXIDE, FORMIC ACID, Heme oxygenase 1, ...
Authors:Sugishima, M, Moffat, K, Noguchi, M.
Deposit date:2012-07-20
Release date:2012-10-31
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Discrimination between CO and O(2) in heme oxygenase: comparison of static structures and dynamic conformation changes following CO photolysis.
Biochemistry, 51, 2012
4G98
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Rat Heme Oxygenase-1 in complex with Heme and CO at 100K
Descriptor: CARBON MONOXIDE, FORMIC ACID, Heme oxygenase 1, ...
Authors:Sugishima, M, Moffat, K, Noguchi, M.
Deposit date:2012-07-23
Release date:2012-10-31
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Discrimination between CO and O(2) in heme oxygenase: comparison of static structures and dynamic conformation changes following CO photolysis.
Biochemistry, 51, 2012
3C2W
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Crystal structure of the photosensory core domain of P. aeruginosa bacteriophytochrome PaBphP in the Pfr state
Descriptor: BILIVERDINE IX ALPHA, Bacteriophytochrome
Authors:Yang, X, Kuk, J, Moffat, K.
Deposit date:2008-01-25
Release date:2008-09-23
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of Pseudomonas aeruginosa bacteriophytochrome: photoconversion and signal transduction.
Proc.Natl.Acad.Sci.USA, 105, 2008
3G6O
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Crystal structure of P. aeruginosa bacteriophytochrome PaBphP photosensory core domain mutant Q188L
Descriptor: BILIVERDINE IX ALPHA, Bacteriophytochrome
Authors:Yang, X, Kuk, J, Moffat, K.
Deposit date:2009-02-07
Release date:2009-09-22
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Conformational differences between the Pfr and Pr states in Pseudomonas aeruginosa bacteriophytochrome
Proc.Natl.Acad.Sci.USA, 106, 2009
3ULF
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BU of 3ulf by Molmil
The light state structure of the blue-light photoreceptor Aureochrome1 LOV
Descriptor: Aureochrome1, FLAVIN MONONUCLEOTIDE, PHOSPHATE ION
Authors:Mitra, D, Yang, X, Moffat, K.
Deposit date:2011-11-10
Release date:2012-04-11
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structures of Aureochrome1 LOV suggest new design strategies for optogenetics.
Structure, 20, 2012
3UE6
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BU of 3ue6 by Molmil
The dark structure of the blue-light photoreceptor Aureochrome1 LOV
Descriptor: Aureochrome1, FLAVIN MONONUCLEOTIDE, PHOSPHATE ION
Authors:Mitra, D, Yang, X, Moffat, K.
Deposit date:2011-10-28
Release date:2012-04-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Crystal structures of Aureochrome1 LOV suggest new design strategies for optogenetics.
Structure, 20, 2012
1AJH
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BU of 1ajh by Molmil
PHOTOPRODUCT OF CARBONMONOXY MYOGLOBIN AT 40 K
Descriptor: CARBON MONOXIDE, MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Teng, T.Y, Srajer, V, Moffat, K.
Deposit date:1997-05-02
Release date:1997-11-12
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Photolysis-induced structural changes in single crystals of carbonmonoxy myoglobin at 40 K.
Nat.Struct.Biol., 1, 1994
1AJG
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BU of 1ajg by Molmil
CARBONMONOXY MYOGLOBIN AT 40 K
Descriptor: CARBON MONOXIDE, MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Teng, T.Y, Srajer, V, Moffat, K.
Deposit date:1997-05-02
Release date:1997-11-12
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Photolysis-induced structural changes in single crystals of carbonmonoxy myoglobin at 40 K.
Nat.Struct.Biol., 1, 1994
3NHQ
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BU of 3nhq by Molmil
The dark Pfr structure of the photosensory core module of P. aeruginosa Bacteriophytochrome
Descriptor: BILIVERDINE IX ALPHA, Bacteriophytochrome
Authors:Yang, X, Ren, Z, Kuk, J, Moffat, K.
Deposit date:2010-06-14
Release date:2011-11-30
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Temperature-scan cryocrystallography reveals reaction intermediates in bacteriophytochrome.
Nature, 479, 2011
3IBR
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BU of 3ibr by Molmil
Crystal Structure of P. aeruginosa Bacteriophytochrome Photosensory Core Module Mutant Q188L in the Mixed Pr/Pfr State
Descriptor: BILIVERDINE IX ALPHA, Bacteriophytochrome
Authors:Yang, X, Kuk, J, Moffat, K.
Deposit date:2009-07-16
Release date:2009-09-22
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.97 Å)
Cite:Conformational differences between the Pfr and Pr states in Pseudomonas aeruginosa bacteriophytochrome.
Proc.Natl.Acad.Sci.USA, 106, 2009
1G28
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BU of 1g28 by Molmil
STRUCTURE OF A FLAVIN-BINDING DOMAIN, LOV2, FROM THE CHIMERIC PHYTOCHROME/PHOTOTROPIN PHOTORECEPTOR PHY3
Descriptor: FLAVIN MONONUCLEOTIDE, PHY3 PROTEIN
Authors:Crosson, S, Moffat, K.
Deposit date:2000-10-17
Release date:2001-03-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.73 Å)
Cite:Structure of a flavin-binding plant photoreceptor domain: insights into light-mediated signal transduction
Proc.Natl.Acad.Sci.USA, 98, 2001
4ZYL
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BU of 4zyl by Molmil
Crystal structure of response regulator RPA3017 in red light signaling of R. palustris
Descriptor: RphyB protein
Authors:Yang, X, Moffat, K.
Deposit date:2015-05-21
Release date:2015-10-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of the response regulator RPA3017 involved in red-light signaling in Rhodopseudomonas palustris.
Acta Crystallogr F Struct Biol Commun, 71, 2015
1JNU
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BU of 1jnu by Molmil
Photoexcited structure of the plant photoreceptor domain, phy3 LOV2
Descriptor: FLAVIN MONONUCLEOTIDE, PHY3 PROTEIN
Authors:Crosson, S, Moffat, K.
Deposit date:2001-07-25
Release date:2002-06-14
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Photoexcited structure of a plant photoreceptor domain reveals a light-driven molecular switch.
Plant Cell, 14, 2002
1MZU
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BU of 1mzu by Molmil
Crystal Structure of the Photoactive Yellow Protein Domain from the Sensor Histidine Kinase Ppr from Rhodospirillum centenum
Descriptor: 4'-HYDROXYCINNAMIC ACID, PPR
Authors:Rajagopal, S, Moffat, K.
Deposit date:2002-10-09
Release date:2003-02-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of a Photoactive Yellow Protein from a Sensor Histidine Kinase: Conformational Variability and Signal Transduction
Proc.Natl.Acad.Sci.USA, 100, 2003
2HFO
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BU of 2hfo by Molmil
Crystal Structures of the Synechocystis Photoreceptor Slr1694 Reveal Distinct Structural States Related to Signaling
Descriptor: Activator of photopigment and puc expression, FLAVIN MONONUCLEOTIDE
Authors:Yuan, H, Anderson, S, Masuda, S, Dragnea, V, Moffat, K, Bauer, C.E.
Deposit date:2006-06-24
Release date:2006-12-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures of the Synechocystis photoreceptor Slr1694 reveal distinct structural states related to signaling.
Biochemistry, 45, 2006
2HFN
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BU of 2hfn by Molmil
Crystal Structures of the Synechocystis Photoreceptor Slr1694 Reveal Distinct Structural States Related to Signaling
Descriptor: FLAVIN MONONUCLEOTIDE, Synechocystis Photoreceptor (Slr1694)
Authors:Yuan, H, Anderson, S, Masuda, S, Dragnea, V, Moffat, K, Bauer, C.E.
Deposit date:2006-06-24
Release date:2006-12-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of the Synechocystis photoreceptor Slr1694 reveal distinct structural states related to signaling.
Biochemistry, 45, 2006
2GJ3
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BU of 2gj3 by Molmil
Crystal structure of the FAD-containing PAS domain of the protein NifL from Azotobacter vinelandii.
Descriptor: ETHANOL, FLAVIN-ADENINE DINUCLEOTIDE, Nitrogen fixation regulatory protein, ...
Authors:Key, J, Hefti, M, Purcell, E, Moffat, K.
Deposit date:2006-03-30
Release date:2007-03-06
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.04 Å)
Cite:Structure of the redox sensor domain of Azotobacter vinelandii NifL at atomic resolution: signaling, dimerization, and mechanism.
Biochemistry, 46, 2007

 

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