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PDB: 762 results

2A97
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Crystal structure of catalytic domain of Clostridium botulinum neurotoxin serotype F
Descriptor: Botulinum neurotoxin type F, CADMIUM ION, ZINC ION
Authors:Agarwal, R, Binz, T, Swaminathan, S.
Deposit date:2005-07-11
Release date:2005-09-20
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural analysis of botulinum neurotoxin serotype f light chain: implications on substrate binding and inhibitor design
Biochemistry, 44, 2005
1CV7
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BU of 1cv7 by Molmil
Crystal structure of enhanced cyan-emission variant of GFP
Descriptor: GREEN FLUORESCENT PROTEIN
Authors:O'Brien, P, Elsliger, M.A, Kallio, K, Remington, S.J.
Deposit date:1999-08-23
Release date:2003-09-16
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of Enhanced Cyan-Emission Variant od GFP
To be Published, 1999
3BLS
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BU of 3bls by Molmil
AMPC BETA-LACTAMASE FROM ESCHERICHIA COLI
Descriptor: AMPC BETA-LACTAMASE, M-AMINOPHENYLBORONIC ACID
Authors:Usher, K.C, Shoichet, B.K, Remington, S.J.
Deposit date:1998-06-04
Release date:1998-08-12
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Three-dimensional structure of AmpC beta-lactamase from Escherichia coli bound to a transition-state analogue: possible implications for the oxyanion hypothesis and for inhibitor design.
Biochemistry, 37, 1998
2A46
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BU of 2a46 by Molmil
Crystal structures of amFP486, a cyan fluorescent protein from Anemonia majano, and variants
Descriptor: BETA-MERCAPTOETHANOL, GFP-like fluorescent chromoprotein amFP486
Authors:Henderson, J.N, Remington, S.J.
Deposit date:2005-06-28
Release date:2005-08-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structures and mutational analysis of amFP486, a cyan fluorescent protein from Anemonia majano
Proc.Natl.Acad.Sci.Usa, 102, 2005
4UXN
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BU of 4uxn by Molmil
LSD1(KDM1A)-CoREST in complex with Z-Pro derivative of MC2580
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A, REST COREPRESSOR 1, ...
Authors:Rodriguez, V, Valente, S, Stazi, G, Lucidi, A, Mercurio, C, Vianello, P, Ciossani, G, Mattevi, A, Botrugno, O.A, Dessanti, P, Minucci, S, Varasi, M, Mai, A.
Deposit date:2014-08-27
Release date:2015-02-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Pyrrole- and Indole-Containing Tranylcypromine Derivatives as Novel Lysine-Specific Demethylase 1 Inhibitors Active on Cancer Cells
Chemmedchem, 6, 2015
4EXO
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BU of 4exo by Molmil
Revised, rerefined crystal structure of PDB entry 2QHK, methyl accepting chemotaxis protein
Descriptor: Methyl-accepting chemotaxis protein, PYRUVIC ACID
Authors:Sweeney, E.G, Henderson, J.N, Goers, J, Wreden, C, Hicks, K.G, Foster, J.K, Parthasarathy, R, Remington, S.J, Guillemin, K.
Deposit date:2012-04-30
Release date:2012-05-30
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and Proposed Mechanism for the pH-Sensing Helicobacter pylori Chemoreceptor TlpB.
Structure, 20, 2012
2A48
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Crystal structure of amFP486 E150Q
Descriptor: BETA-MERCAPTOETHANOL, GFP-like fluorescent chromoprotein amFP486
Authors:Henderson, J.N, Remington, S.J.
Deposit date:2005-06-28
Release date:2005-08-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures and mutational analysis of amFP486, a cyan fluorescent protein from Anemonia majano
Proc.Natl.Acad.Sci.Usa, 102, 2005
3BQX
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BU of 3bqx by Molmil
High resolution crystal structure of a glyoxalase-related enzyme from Fulvimarina pelagi
Descriptor: Glyoxalase-related enzyme
Authors:Rao, K.N, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-12-20
Release date:2008-01-08
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:High resolution crystal structure of a glyoxalase-related enzyme from Fulvimarina pelagi.
To be Published
2AH8
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BU of 2ah8 by Molmil
roGFP1-R7. Cystal structure analysis of a rate-enhanced variant of redox-sensitive green fluorescent protein in the oxidized form.
Descriptor: Green fluorescent protein, IMIDAZOLE
Authors:Cannon, M.B, Remington, S.J.
Deposit date:2005-07-27
Release date:2006-03-21
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Re-engineering redox-sensitive green fluorescent protein for improved response rate.
Protein Sci., 15, 2006
1EAY
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BU of 1eay by Molmil
CHEY-BINDING (P2) DOMAIN OF CHEA IN COMPLEX WITH CHEY FROM ESCHERICHIA COLI
Descriptor: CHEA, CHEY
Authors:Mcevoy, M.M, Hausrath, A.C, Randolph, G.B, Remington, S.J, Dahlquist, F.W.
Deposit date:1998-04-23
Release date:1998-07-15
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Two binding modes reveal flexibility in kinase/response regulator interactions in the bacterial chemotaxis pathway.
Proc.Natl.Acad.Sci.USA, 95, 1998
7BPN
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BU of 7bpn by Molmil
Solution NMR structure of NF7; de novo designed protein with a novel fold
Descriptor: NF7
Authors:Kobayashi, N, Sugiki, T, Fujiwara, T, Minami, S, Koga, R, Chikenji, G, Koga, N.
Deposit date:2020-03-23
Release date:2021-03-24
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Exploration of novel alpha-beta-protein folds through de novo design
Nat.Struct.Mol.Biol., 2023
7BQD
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BU of 7bqd by Molmil
Solution NMR structure of NF8 (knot fold); de novo designed protein with a novel fold
Descriptor: NF8
Authors:Kobayashi, N, Sugiki, T, Fujiwara, T, Minami, S, Koga, R, Chikenji, G, Koga, N.
Deposit date:2020-03-24
Release date:2021-03-24
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Exploration of novel alpha-beta-protein folds through de novo design
Nat.Struct.Mol.Biol., 2023
2CZN
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BU of 2czn by Molmil
Solution structure of the chitin-binding domain of hyperthermophilic chitinase from pyrococcus furiosus
Descriptor: chitinase
Authors:Uegaki, T, Ikegami, T, Nakamura, T, Hagihara, Y, Mine, S, Inoue, T, Matsumura, H, Ataka, M, Ishikawa, K.
Deposit date:2005-07-13
Release date:2006-07-18
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Tertiary structure and carbohydrate recognition by the chitin-binding domain of a hyperthermophilic chitinase from Pyrococcus furiosus.
J.Mol.Biol., 381, 2008
1GLJ
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BU of 1glj by Molmil
ESCHERICHIA COLI GLYCEROL KINASE MUTANT WITH BOUND ATP ANALOG SHOWING SUBSTANTIAL DOMAIN MOTION
Descriptor: GAMMA-ARSONO-BETA, GAMMA-METHYLENEADENOSINE-5'-DIPHOSPHATE, GLYCEROL, ...
Authors:Bystrom, C.E, Pettigrew, D.W, Branchaud, B.P, Remington, S.J.
Deposit date:1998-09-03
Release date:1999-05-18
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structures of Escherichia coli glycerol kinase variant S58-->W in complex with nonhydrolyzable ATP analogues reveal a putative active conformation of the enzyme as a result of domain motion.
Biochemistry, 38, 1999
1GGW
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BU of 1ggw by Molmil
CDC4P FROM SCHIZOSACCHAROMYCES POMBE
Descriptor: PROTEIN (CDC4P)
Authors:Slupsky, C.M, Hemmingsen, S.M, McIntosh, L.P.
Deposit date:2000-09-25
Release date:2001-03-21
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Structure of Cdc4p, a contractile ring protein essential for cytokinesis in Schizosaccharomyces pombe.
J.Biol.Chem., 276, 2001
1GLL
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BU of 1gll by Molmil
ESCHERICHIA COLI GLYCEROL KINASE MUTANT WITH BOUND ATP ANALOG SHOWING SUBSTANTIAL DOMAIN MOTION
Descriptor: GLYCEROL, GLYCEROL KINASE, MAGNESIUM ION, ...
Authors:Bystrom, C.E, Pettigrew, D.W, Branchaud, B.P, Remington, S.J.
Deposit date:1998-09-24
Release date:1999-05-18
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structures of Escherichia coli glycerol kinase variant S58-->W in complex with nonhydrolyzable ATP analogues reveal a putative active conformation of the enzyme as a result of domain motion.
Biochemistry, 38, 1999
1EMA
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BU of 1ema by Molmil
GREEN FLUORESCENT PROTEIN FROM AEQUOREA VICTORIA
Descriptor: GREEN FLUORESCENT PROTEIN
Authors:Ormo, M, Remington, S.J.
Deposit date:1996-08-01
Release date:1996-11-08
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the Aequorea victoria green fluorescent protein.
Science, 273, 1996
1F09
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BU of 1f09 by Molmil
CRYSTAL STRUCTURE OF THE GREEN FLUORESCENT PROTEIN (GFP) VARIANT YFP-H148Q WITH TWO BOUND IODIDES
Descriptor: GREEN FLUORESCENT PROTEIN, IODIDE ION
Authors:Wachter, R.M, Yarbrough, D, Kallio, K, Remington, S.J.
Deposit date:2000-05-15
Release date:2000-11-17
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Crystallographic and energetic analysis of binding of selected anions to the yellow variants of green fluorescent protein.
J.Mol.Biol., 301, 2000
1F0B
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BU of 1f0b by Molmil
CRYSTAL STRUCTURE OF THE GREEN FLUORESCENT PROTEIN (GFP) VARIANT YFP-H148Q
Descriptor: GREEN FLUORESCENT PROTEIN
Authors:Wachter, R.M, Yarbrough, D, Kallio, K, Remington, S.J.
Deposit date:2000-05-15
Release date:2000-11-17
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystallographic and energetic analysis of binding of selected anions to the yellow variants of green fluorescent protein.
J.Mol.Biol., 301, 2000
3UB6
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BU of 3ub6 by Molmil
Periplasmic portion of the Helicobacter pylori chemoreceptor TlpB with urea bound
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, SULFATE ION, ...
Authors:Henderson, J.N, Sweeney, E.G, Goers, J, Wreden, C, Hicks, K.G, Parthasarathy, R, Guillemin, K.J, Remington, S.J.
Deposit date:2011-10-23
Release date:2012-06-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Structure and proposed mechanism for the pH-sensing Helicobacter pylori chemoreceptor TlpB.
Structure, 20, 2012
1CSC
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BU of 1csc by Molmil
Structure of ternary complexes of citrate synthase with D-and L-malate: Mechanistic implications
Descriptor: (2S)-2-hydroxybutanedioic acid, CARBOXYMETHYL COENZYME *A, CITRATE SYNTHASE
Authors:Karpusas, M, Holland, D, Remington, S.J.
Deposit date:1990-05-07
Release date:1991-04-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:1.9-A structures of ternary complexes of citrate synthase with D- and L-malate: mechanistic implications.
Biochemistry, 30, 1991
3BE3
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BU of 3be3 by Molmil
Crystal structure of a protein belonging to pfam DUF1653 from Bordetella bronchiseptica
Descriptor: SULFATE ION, Uncharacterized protein
Authors:Tyagi, R, Eswaramoorthy, S, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-11-16
Release date:2007-11-27
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Crystal structure of a protein belonging to pfam DUF1653 from Bordetella bronchiseptica.
To be Published
1CSI
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BU of 1csi by Molmil
A very short hydrogen bond provides only moderate stabilization of an enzyme: inhibitor complex of citrate synthase
Descriptor: CARBOXYMETHYLDETHIA COENZYME *A, CITRATE SYNTHASE, OXALOACETATE ION
Authors:Usher, K.C, Remington, S.J.
Deposit date:1994-03-07
Release date:1994-04-30
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A very short hydrogen bond provides only moderate stabilization of an enzyme-inhibitor complex of citrate synthase.
Biochemistry, 33, 1994
1I4P
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BU of 1i4p by Molmil
CRYSTAL STRUCTURE OF STAPHYLOCOCCAL ENTEROTOXIN C2 AT 100K CRYSTALLIZED AT PH 5.5
Descriptor: ENTEROTOXIN TYPE C-2, ZINC ION
Authors:Kumaran, D, Swaminathan, S.
Deposit date:2001-02-22
Release date:2001-03-14
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of staphylococcal enterotoxin C2 at various pH levels.
Acta Crystallogr.,Sect.D, 57, 2001
1EMG
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BU of 1emg by Molmil
GREEN FLUORESCENT PROTEIN (65-67 REPLACED BY CRO, S65T SUBSTITUTION, Q80R)
Descriptor: PROTEIN (GREEN FLUORESCENT PROTEIN)
Authors:Elsliger, M.A, Wachter, R.M, Kallio, K, Hanson, G.T, Remington, S.J.
Deposit date:1998-11-12
Release date:1999-05-12
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and spectral response of green fluorescent protein variants to changes in pH.
Biochemistry, 38, 1999

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