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PDB: 24 results

5YU0
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BU of 5yu0 by Molmil
Structural basis for recognition of L-lysine, L-ornithine, and L-2,4-diamino butyric acid by lysine cyclodeaminase
Descriptor: Lysine cyclodeaminase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SODIUM ION
Authors:Min, K.J, Yoon, H.J, Matsuura, A, Kim, Y.H, Lee, H.H.
Deposit date:2017-11-20
Release date:2018-05-02
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Structural Basis for Recognition of L-lysine, L-ornithine, and L-2,4-diamino Butyric Acid by Lysine Cyclodeaminase.
Mol. Cells, 41, 2018
5YU4
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BU of 5yu4 by Molmil
Structural basis for recognition of L-lysine, L-ornithine, and L-2,4-diamino butyric acid by lysine cyclodeaminase
Descriptor: 2,4-DIAMINOBUTYRIC ACID, Lysine cyclodeaminase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Min, K.J, Yoon, H.J, Matsuura, A, Kim, Y.H, Lee, H.H.
Deposit date:2017-11-20
Release date:2018-05-02
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.144 Å)
Cite:Structural Basis for Recognition of L-lysine, L-ornithine, and L-2,4-diamino Butyric Acid by Lysine Cyclodeaminase.
Mol. Cells, 41, 2018
5YU3
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BU of 5yu3 by Molmil
Structural basis for recognition of L-lysine, L-ornithine, and L-2,4-diamino butyric acid by lysine cyclodeaminase
Descriptor: Lysine cyclodeaminase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, PROLINE, ...
Authors:Min, K.J, Yoon, H.J, Matsuura, A, Kim, Y.H, Lee, H.H.
Deposit date:2017-11-20
Release date:2018-05-02
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Structural Basis for Recognition of L-lysine, L-ornithine, and L-2,4-diamino Butyric Acid by Lysine Cyclodeaminase.
Mol. Cells, 41, 2018
5YU1
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BU of 5yu1 by Molmil
Structural basis for recognition of L-lysine, L-ornithine, and L-2,4-diamino butyric acid by lysine cyclodeaminase
Descriptor: (2S)-piperidine-2-carboxylic acid, Lysine cyclodeaminase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Min, K.J, Yoon, H.J, Matsuura, A, Kim, Y.H, Lee, H.H.
Deposit date:2017-11-20
Release date:2018-05-02
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.923 Å)
Cite:Structural Basis for Recognition of L-lysine, L-ornithine, and L-2,4-diamino Butyric Acid by Lysine Cyclodeaminase.
Mol. Cells, 41, 2018
6JMZ
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BU of 6jmz by Molmil
Structure of H247A mutant open form peptidoglycan peptidase
Descriptor: Peptidase M23, ZINC ION
Authors:Min, K.J, An, D.R, Yoon, H.J, Suh, S.W, Lee, H.H.
Deposit date:2019-03-13
Release date:2020-01-15
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Peptidoglycan reshaping by a noncanonical peptidase for helical cell shape in Campylobacter jejuni.
Nat Commun, 11, 2020
6JMX
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BU of 6jmx by Molmil
Structure of open form of peptidoglycan peptidase
Descriptor: D(-)-TARTARIC ACID, GLYCEROL, Peptidase M23, ...
Authors:Min, K.J, An, D.R, Yoon, H.J, Suh, S.W, Lee, H.H.
Deposit date:2019-03-13
Release date:2020-01-15
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.859 Å)
Cite:Peptidoglycan reshaping by a noncanonical peptidase for helical cell shape in Campylobacter jejuni.
Nat Commun, 11, 2020
6JN1
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BU of 6jn1 by Molmil
Structure of H247A mutant peptidoglycan peptidase complex with penta peptide
Descriptor: C0O-DAL-DAL, Peptidase M23, ZINC ION
Authors:Min, K.J, An, D.R, Yoon, H.J, Suh, S.W, Lee, H.H.
Deposit date:2019-03-13
Release date:2020-01-15
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.382 Å)
Cite:Peptidoglycan reshaping by a noncanonical peptidase for helical cell shape in Campylobacter jejuni.
Nat Commun, 11, 2020
6JN0
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BU of 6jn0 by Molmil
Structure of H247A mutant peptidoglycan peptidase complex with tetra-tri peptide
Descriptor: C0O-DAL-API, Peptidase M23, ZINC ION
Authors:Min, K.J, An, D.R, Yoon, H.J, Suh, S.W, Lee, H.H.
Deposit date:2019-03-13
Release date:2020-01-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.164 Å)
Cite:Peptidoglycan reshaping by a noncanonical peptidase for helical cell shape in Campylobacter jejuni.
Nat Commun, 11, 2020
6JN7
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BU of 6jn7 by Molmil
Structure of H216A mutant closed form peptidoglycan peptidase
Descriptor: D(-)-TARTARIC ACID, Peptidase M23, ZINC ION
Authors:Min, K.J, An, D.R, Yoon, H.J, Suh, S.W, Lee, H.H.
Deposit date:2019-03-13
Release date:2020-01-15
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Peptidoglycan reshaping by a noncanonical peptidase for helical cell shape in Campylobacter jejuni.
Nat Commun, 11, 2020
6JMY
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BU of 6jmy by Molmil
Structure of wild type closed form of peptidoglycan peptidase
Descriptor: CITRIC ACID, Peptidase M23, ZINC ION
Authors:Min, K.J, An, D.R, Yoon, H.J, Suh, S.W, Lee, H.H.
Deposit date:2019-03-13
Release date:2020-01-15
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.661 Å)
Cite:Peptidoglycan reshaping by a noncanonical peptidase for helical cell shape in Campylobacter jejuni.
Nat Commun, 11, 2020
6K3F
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BU of 6k3f by Molmil
Crystal Structure of beta-Arrestin 2 in Complex with CXCR7 Phosphopeptide
Descriptor: Beta-arrestin-2, Peptide from Atypical chemokine receptor 3
Authors:Min, K.J, Yoon, H.J, Lee, H.H.
Deposit date:2019-05-18
Release date:2020-06-10
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of beta-Arrestin 2 in Complex with CXCR7 Phosphopeptide.
Structure, 28, 2020
6KV1
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BU of 6kv1 by Molmil
Structure of wild type closed form of peptidoglycan peptidase ZN SAD
Descriptor: CITRIC ACID, Peptidase M23, ZINC ION
Authors:Min, K.J, An, D.R, Yoon, H.J, Suh, S.W, Lee, H.H.
Deposit date:2019-09-03
Release date:2020-01-15
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.722 Å)
Cite:Peptidoglycan reshaping by a noncanonical peptidase for helical cell shape in Campylobacter jejuni.
Nat Commun, 11, 2020
6JN8
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BU of 6jn8 by Molmil
Structure of H216A mutant open form peptidoglycan peptidase
Descriptor: Peptidase M23, SULFATE ION, ZINC ION
Authors:Min, K.J, An, D.R, Yoon, H.J, Suh, S.W, Lee, H.H.
Deposit date:2019-03-13
Release date:2020-01-15
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.106 Å)
Cite:Peptidoglycan reshaping by a noncanonical peptidase for helical cell shape in Campylobacter jejuni.
Nat Commun, 11, 2020
7E61
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BU of 7e61 by Molmil
The crystal structure of peptidoglycan peptidase in complex with inhibitor 2
Descriptor: 2-[[(3S)-3-acetamido-4-[[(2R)-1-(oxidanylamino)-1-oxidanylidene-propan-2-yl]amino]-4-oxidanylidene-butyl]-(phenylmethyl)amino]ethanoic acid, Peptidase M23, ZINC ION
Authors:Min, K.J, Yoon, H.J, Choi, Y, Lee, H.H.
Deposit date:2021-02-21
Release date:2022-02-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure-based inhibitor design for reshaping bacterial morphology
Commun Biol, 5, 2022
7E69
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BU of 7e69 by Molmil
The crystal structure of peptidoglycan peptidase in complex with inhibitor 3-3
Descriptor: N-oxidanyl-4-[(4-sulfamoylphenyl)methyl]benzamide, Peptidase M23, ZINC ION
Authors:Choi, Y, Min, K.J, Yoon, H.J, Lee, H.H.
Deposit date:2021-02-21
Release date:2022-02-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Structure-based inhibitor design for reshaping bacterial morphology
Commun Biol, 5, 2022
7E65
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BU of 7e65 by Molmil
The crystal structure of peptidoglycan peptidase in complex with inhibitor 3
Descriptor: (2S)-2-acetamido-N-[(2R)-1-(oxidanylamino)-1-oxidanylidene-propan-2-yl]-3-(4-sulfamoylphenyl)propanamide, Peptidase M23, ZINC ION
Authors:Choi, Y, Min, K.J, Yoon, H.J, Lee, H.H.
Deposit date:2021-02-21
Release date:2022-02-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structure-based inhibitor design for reshaping bacterial morphology
Commun Biol, 5, 2022
7E64
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BU of 7e64 by Molmil
The crystal structure of peptidoglycan peptidase in complex with inhibitor 2-2
Descriptor: 2-[[(3S)-3-acetamido-4-[[(2R)-1-(oxidanylamino)-1-oxidanylidene-propan-2-yl]amino]-4-oxidanylidene-butyl]amino]ethanoic acid, Peptidase M23, ZINC ION
Authors:Choi, Y, Min, K.J, Yoon, H.J, Lee, H.H.
Deposit date:2021-02-21
Release date:2022-02-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure-based inhibitor design for reshaping bacterial morphology
Commun Biol, 5, 2022
7E67
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BU of 7e67 by Molmil
The crystal structure of peptidoglycan peptidase in complex with inhibitor 3-2
Descriptor: N-oxidanyl-2-[4-(4-sulfamoylphenyl)phenyl]ethanamide, Peptidase M23, ZINC ION
Authors:Choi, Y, Min, K.J, Yoon, H.J, Lee, H.H.
Deposit date:2021-02-21
Release date:2022-02-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structure-based inhibitor design for reshaping bacterial morphology
Commun Biol, 5, 2022
7E63
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BU of 7e63 by Molmil
The crystal structure of peptidoglycan peptidase in complex with inhibitor 2-1
Descriptor: 2-[[(3S)-3-acetamido-4-[[(2R)-1-(oxidanylamino)-1-oxidanylidene-propan-2-yl]amino]-4-oxidanylidene-butyl]-(cyclopentylmethyl)amino]ethanoic acid, Peptidase M23, ZINC ION
Authors:Choi, Y, Min, K.J, Yoon, H.J, Lee, H.H.
Deposit date:2021-02-21
Release date:2022-02-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure-based inhibitor design for reshaping bacterial morphology
Commun Biol, 5, 2022
7E66
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BU of 7e66 by Molmil
The crystal structure of peptidoglycan peptidase in complex with inhibitor 3-1
Descriptor: N-[2-(oxidanylamino)-2-oxidanylidene-ethyl]-2-(4-sulfamoylphenyl)ethanamide, Peptidase M23, ZINC ION
Authors:Choi, Y, Min, K.J, Yoon, H.J, Lee, H.H.
Deposit date:2021-02-21
Release date:2022-02-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.84 Å)
Cite:Structure-based inhibitor design for reshaping bacterial morphology
Commun Biol, 5, 2022
3UB7
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BU of 3ub7 by Molmil
Periplasmic portion of the Helicobacter pylori chemoreceptor TlpB with acetamide bound
Descriptor: ACETAMIDE, GLYCEROL, SULFATE ION, ...
Authors:Henderson, J.N, Sweeney, E.G, Goers, J, Wreden, C, Hicks, K.G, Parthasarathy, R, Guillemin, K.J, Remington, S.J.
Deposit date:2011-10-23
Release date:2012-06-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure and proposed mechanism for the pH-sensing Helicobacter pylori chemoreceptor TlpB.
Structure, 20, 2012
3UB8
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BU of 3ub8 by Molmil
Periplasmic portion of the Helicobacter pylori chemoreceptor TlpB with formamide bound
Descriptor: FORMAMIDE, GLYCEROL, SULFATE ION, ...
Authors:Henderson, J.N, Sweeney, E.G, Goers, J, Wreden, C, Hicks, K.G, Parthasarathy, R, Guillemin, K.J, Remington, S.J.
Deposit date:2011-10-23
Release date:2012-06-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Structure and proposed mechanism for the pH-sensing Helicobacter pylori chemoreceptor TlpB.
Structure, 20, 2012
3UB9
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BU of 3ub9 by Molmil
Periplasmic portion of the Helicobacter pylori chemoreceptor TlpB with hydroxyurea bound
Descriptor: GLYCEROL, N-HYDROXYUREA, SULFATE ION, ...
Authors:Henderson, J.N, Sweeney, E.G, Goers, J, Wreden, C, Hicks, K.G, Parthasarathy, R, Guillemin, K.J, Remington, S.J.
Deposit date:2011-10-23
Release date:2012-06-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Structure and proposed mechanism for the pH-sensing Helicobacter pylori chemoreceptor TlpB.
Structure, 20, 2012
3UB6
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BU of 3ub6 by Molmil
Periplasmic portion of the Helicobacter pylori chemoreceptor TlpB with urea bound
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, SULFATE ION, ...
Authors:Henderson, J.N, Sweeney, E.G, Goers, J, Wreden, C, Hicks, K.G, Parthasarathy, R, Guillemin, K.J, Remington, S.J.
Deposit date:2011-10-23
Release date:2012-06-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Structure and proposed mechanism for the pH-sensing Helicobacter pylori chemoreceptor TlpB.
Structure, 20, 2012

227561

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