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PDB: 109 results

6E09
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Crystal Structure of Helicobacter pylori TlpA Chemoreceptor Ligand Binding Domain
Descriptor: Methyl-accepting chemotaxis protein TlpA
Authors:Remington, S.J, Guillemin, K, Sweeney, E, Perkins, A.
Deposit date:2018-07-06
Release date:2018-09-12
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of the ligand-binding domain of Helicobacter pylori chemoreceptor TlpA.
Protein Sci., 27, 2018
4EXO
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Revised, rerefined crystal structure of PDB entry 2QHK, methyl accepting chemotaxis protein
Descriptor: Methyl-accepting chemotaxis protein, PYRUVIC ACID
Authors:Sweeney, E.G, Henderson, J.N, Goers, J, Wreden, C, Hicks, K.G, Foster, J.K, Parthasarathy, R, Remington, S.J, Guillemin, K.
Deposit date:2012-04-30
Release date:2012-05-30
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and Proposed Mechanism for the pH-Sensing Helicobacter pylori Chemoreceptor TlpB.
Structure, 20, 2012
3K1D
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BU of 3k1d by Molmil
Crystal structure of glycogen branching enzyme synonym: 1,4-alpha-D-glucan:1,4-alpha-D-GLUCAN 6-glucosyl-transferase from mycobacterium tuberculosis H37RV
Descriptor: 1,4-alpha-glucan-branching enzyme
Authors:Pal, K, Kumar, S, Swaminathan, K.
Deposit date:2009-09-27
Release date:2010-05-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Crystal structure of full-length Mycobacterium tuberculosis H37Rv glycogen branching enzyme: insights of N-terminal beta-sandwich in substrate specificity and enzymatic activity
J.Biol.Chem., 285, 2010
3N94
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Crystal structure of human pituitary adenylate cyclase 1 Receptor-short N-terminal extracellular domain
Descriptor: Fusion protein of Maltose-binding periplasmic protein and pituitary adenylate cyclase 1 Receptor-short, SULFATE ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Kumar, S, Pioszak, A.A, Swaminathan, K, Xu, H.E.
Deposit date:2010-05-28
Release date:2011-06-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of the PAC1R Extracellular Domain Unifies a Consensus Fold for Hormone Recognition by Class B G-Protein Coupled Receptors.
Plos One, 6, 2011
6LKB
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BU of 6lkb by Molmil
Crystal Structure of the peptidylprolyl isomerase domain of Arabidopsis thaliana CYP71.
Descriptor: COBALT (II) ION, GLYCEROL, PHOSPHATE ION, ...
Authors:Lakhanpal, S, Jobichen, C, Swaminathan, K.
Deposit date:2019-12-18
Release date:2020-12-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.651 Å)
Cite:Structural and functional analyses of the PPIase domain of Arabidopsis thaliana CYP71 reveal its catalytic activity toward histone H3.
Febs Lett., 595, 2021
4XZX
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Shigella flexneri effector OspI C62S mutant
Descriptor: ACETATE ION, ORF169b
Authors:Nishide, A, Takagi, K, Minsoo, K, Sasakawa, C, Mizushima, T.
Deposit date:2015-02-05
Release date:2016-02-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:New insights into the active site structure of Shigella effecter OspI
To Be Published
6DTM
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BU of 6dtm by Molmil
Crystal Structure of Helicobacter pylori TlpA Chemoreceptor Ligand Binding Domain
Descriptor: CHLORIDE ION, Methyl-accepting chemotaxis protein TlpA
Authors:Remington, S.J, Guillemin, K, Sweeney, E, Perkins, A.
Deposit date:2018-06-17
Release date:2018-09-12
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structures of the ligand-binding domain of Helicobacter pylori chemoreceptor TlpA.
Protein Sci., 27, 2018
5LV6
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BU of 5lv6 by Molmil
N-terminal motif dimerization of EGFR transmembrane domain in bicellar environment
Descriptor: Epidermal growth factor receptor
Authors:Bragin, P, Bocharov, E, Mineev, K, Bocharova, O, Arseniev, A.
Deposit date:2016-09-12
Release date:2017-04-05
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:The Conformation of the Epidermal Growth Factor Receptor Transmembrane Domain Dimer Dynamically Adapts to the Local Membrane Environment.
Biochemistry, 56, 2017
7AV6
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FAST in a domain-swapped dimer form
Descriptor: FORMIC ACID, Photoactive yellow protein
Authors:Bukhdruker, S, Remeeva, A, Ruchkin, D, Gorbachev, D, Povarova, N, Mineev, K, Goncharuk, S, Baranov, M, Mishin, A, Borshchevskiy, V.
Deposit date:2020-11-04
Release date:2021-06-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:NanoFAST: structure-based design of a small fluorogen-activating protein with only 98 amino acids.
Chem Sci, 12, 2021
7VNX
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BU of 7vnx by Molmil
Crystal structure of TkArkI
Descriptor: GUANOSINE, TkArkI
Authors:Yamashita, S, Minowa, K, Ohira, T, Suzuki, T, Tomita, K.
Deposit date:2021-10-12
Release date:2022-05-04
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:Reversible RNA phosphorylation stabilizes tRNA for cellular thermotolerance.
Nature, 605, 2022
4XNN
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Crystal Structure of a GH7 Family Cellobiohydrolase from Daphnia pulex
Descriptor: Cellobiohydrolase CHBI, GLYCEROL
Authors:Ebrahim, A, Hobdey, S.E, Podkaminer, K, Taylor II, L.E, Beckham, G.T, Decker, S.R, Himmel, M.E, Cragg, S.M, McGeehan, J.E.
Deposit date:2015-01-15
Release date:2016-01-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Characterization of a GH7 Family Cellobiohydrolase from Daphnia pulex
To Be Published
7W7R
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BU of 7w7r by Molmil
High resolution structure of a fish aquaporin reveals a novel extracellular fold.
Descriptor: Aquaporin 1
Authors:Zeng, J, Schmitz, F, Isaksson, S, Glas, J, Arbab, O, Andersson, M, Sundell, K, Eriksson, L, Swaminathan, K, Tornroth-Horsefield, S, Hedfalk, K.
Deposit date:2021-12-06
Release date:2022-10-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.46 Å)
Cite:High-resolution structure of a fish aquaporin reveals a novel extracellular fold.
Life Sci Alliance, 5, 2022
7W7S
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BU of 7w7s by Molmil
High resolution structure of a fish aquaporin reveals a novel extracellular fold.
Descriptor: Aquaporin 1
Authors:Zeng, J, Schmitz, F, Isaksson, S, Glas, J, Arbab, O, Andersson, M, Sundell, K, Eriksson, L, Swaminathan, K, Tornroth-Horsefield, S, Hedfalk, K.
Deposit date:2021-12-06
Release date:2022-10-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:High-resolution structure of a fish aquaporin reveals a novel extracellular fold.
Life Sci Alliance, 5, 2022
7VTJ
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BU of 7vtj by Molmil
The cross-reaction complex structure with VQIIYK peptide and tau antibody's Fab domain.
Descriptor: Heavy chain of Fab, Light chain of Fab, VQIIYK peptide
Authors:Tsuchida, T, Fukuhara, N, Tsuchiya, T, Miyamoto, K, In, Y, Minoura, K, Taniguchi, Y, Ishida, T, Tomoo, K.
Deposit date:2021-10-29
Release date:2022-11-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:The cross-reaction complex structure with VQIIYK peptide and tau antibody's Fab domain.
To Be Published
8UZW
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BU of 8uzw by Molmil
Selenocysteine synthase- SelA
Descriptor: L-seryl-tRNA(Sec) selenium transferase
Authors:Balasco Serrao, V.H, Minari, K, Pereira, H.M, Thiemann, O.H.
Deposit date:2023-11-16
Release date:2024-04-24
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (2.69 Å)
Cite:Bacterial selenocysteine synthase structure revealed by single-particle cryoEM.
Curr Res Struct Biol, 7, 2024
5GIM
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BU of 5gim by Molmil
Crystal structure of thrombin-avathrin complex
Descriptor: C-terminal peptide from Putative uncharacterized protein avahiru, N-terminal peptide from Putative uncharacterized protein avahiru, Thrombin light chain, ...
Authors:Kini, R.M, Koh, C.Y, Iyer, J.K, Swaminathan, K.
Deposit date:2016-06-24
Release date:2017-05-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Avathrin: a novel thrombin inhibitor derived from a multicopy precursor in the salivary glands of the ixodid tick, Amblyomma variegatum.
FASEB J., 31, 2017
7FGK
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BU of 7fgk by Molmil
The Fab antibody single structure against tau protein.
Descriptor: Fab Heavy Chain, Fab Light Chain, GLYCEROL, ...
Authors:Tsuchida, T, Susa, K, Kibiki, T, Tsuchiya, T, Miyamoto, K, In, Y, Minoura, K, Taniguchi, T, Ishida, T, Tomoo, K.
Deposit date:2021-07-27
Release date:2022-07-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The free structure of the Fab domain of antibody that recognizes the PHF core region VQIINK in Tau protein.
To Be Published
5ZU0
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BU of 5zu0 by Molmil
Proteobacterial origin of protein arginine methylation and regulation of Complex I assembly by MidA
Descriptor: Protein arginine methyltransferase NDUFAF7 homolog, mitochondrial, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Arold, S.T, Swaminathan, K, Hameed, U.F.S.
Deposit date:2018-05-05
Release date:2018-08-22
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (2.76 Å)
Cite:Proteobacterial Origin of Protein Arginine Methylation and Regulation of Complex I Assembly by MidA.
Cell Rep, 24, 2018
5ZTZ
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BU of 5ztz by Molmil
Proteobacterial origin of protein arginine methylation and regulation of Complex I assembly by MidA
Descriptor: Protein arginine methyltransferase NDUFAF7 homolog, mitochondrial
Authors:Arold, S.T, Swaminathan, K, Hameed, U.F.S.
Deposit date:2018-05-05
Release date:2018-08-22
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Proteobacterial Origin of Protein Arginine Methylation and Regulation of Complex I Assembly by MidA.
Cell Rep, 24, 2018
5ZZW
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BU of 5zzw by Molmil
Proteobacterial origin of protein arginine methylation and regulation of Complex I assembly by MidA
Descriptor: Protein arginine methyltransferase NDUFAF7 homolog, mitochondrial, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Arold, S.T, Swaminathan, K, Hameed, U.F.S.
Deposit date:2018-06-04
Release date:2018-08-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Proteobacterial Origin of Protein Arginine Methylation and Regulation of Complex I Assembly by MidA.
Cell Rep, 24, 2018
1P7O
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BU of 1p7o by Molmil
Crystal structure of phospholipase A2 (MIPLA4) from Micropechis ikaheka
Descriptor: PHOSPHOLIPASE A2
Authors:Lok, S.M, Swaminathan, K.
Deposit date:2003-05-05
Release date:2004-09-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure and function comparison of Micropechis ikaheka snake venom phospholipase A2 isoenzymes
FEBS J., 272, 2005
1OZY
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BU of 1ozy by Molmil
Crystal Structure of Phospholipase A2 (MIPLA3) From Micropechis Ikaheka
Descriptor: PHOSPHOLIPASE A2, SULFATE ION
Authors:Lok, S.M, Swaminathan, K.
Deposit date:2003-04-10
Release date:2004-09-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure and function comparison of Micropechis ikaheka snake venom phospholipase A2 isoenzymes
FEBS J., 272, 2005
7FGJ
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BU of 7fgj by Molmil
The cross-reaction complex structure with VQILNK peptide and the tau antibody's Fab domain.
Descriptor: CHLORIDE ION, Fab Heavy Chain, Fab Light Chain, ...
Authors:Tsuchida, T, Tsuchiya, T, Miyamoto, K, In, Y, Minoura, K, Taniguchi, T, Ishida, T, Tomoo, K.
Deposit date:2021-07-27
Release date:2022-07-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:The cross-reaction complex structure with VQILNK peptide and the antibody's Fab domain.
To Be Published
7FGR
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BU of 7fgr by Molmil
The cross-reaction complex structure with VQIFNK peptide and the tau antibody's Fab domain.
Descriptor: AMMONIUM ION, CHLORIDE ION, Fab Heavy Chain, ...
Authors:Tsuchida, T, Tsuchiya, T, Miyamoto, K, In, Y, Minoura, K, Taniguchi, T, Ishida, T, Tomoo, K.
Deposit date:2021-07-27
Release date:2022-07-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The cross-reaction complex structure with VQIFNK peptide and the tau antibody's Fab domain.
To Be Published
1PWO
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BU of 1pwo by Molmil
Crystal Structure of Phospholipase A2 (MIPLA2) from Micropechis Ikaheka
Descriptor: Phospholipase A2
Authors:Lok, S.M, Swaminathan, K.
Deposit date:2003-07-02
Release date:2005-03-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure and function comparison of Micropechis ikaheka snake venom phospholipase A2 isoenzymes.
Febs J., 272, 2005

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