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PDB: 204 results

3FHU
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BU of 3fhu by Molmil
Crystal structure of type IV b pilin from Salmonella typhi
Descriptor: Prepilin
Authors:Balakrishna, A.M, Swaminathan, K.
Deposit date:2008-12-10
Release date:2009-10-20
Last modified:2020-09-09
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis of typhoid: Salmonella typhi type IVb pilin (PilS) and cystic fibrosis transmembrane conductance regulator interaction.
Proteins, 77, 2009
5ZTZ
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BU of 5ztz by Molmil
Proteobacterial origin of protein arginine methylation and regulation of Complex I assembly by MidA
Descriptor: Protein arginine methyltransferase NDUFAF7 homolog, mitochondrial
Authors:Arold, S.T, Swaminathan, K, Hameed, U.F.S.
Deposit date:2018-05-05
Release date:2018-08-22
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Proteobacterial Origin of Protein Arginine Methylation and Regulation of Complex I Assembly by MidA.
Cell Rep, 24, 2018
7QZV
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BU of 7qzv by Molmil
Hm-AMP2
Descriptor: Hm-AMP2
Authors:Grafskaia, E.N, Pavlova, E.R, Latsis, I.A, Malakhova, M.V, Lavrenova, V.N, Ivchenkov, D.V, Bashkirov, P.V, Kot, E.F, Mineev, K.S, Arseniev, A.S, Klinov, D.V, Lazarev, V.N.
Deposit date:2022-02-01
Release date:2022-11-23
Method:SOLUTION NMR
Cite:Non-toxic antimicrobial peptide Hm-AMP2 from leech metagenome proteins identified by the gradient-boosting approach
Materials, 224, 2022
7QZW
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BU of 7qzw by Molmil
Hm-AMP8
Descriptor: Hm-AMP8
Authors:Grafskaia, E.N, Pavlova, E.R, Latsis, I.A, Malakhova, M.V, Lavrenova, V.N, Ivchenkov, D.V, Bashkirov, P.V, Kot, E.F, Mineev, K.S, Arseniev, A.S, Klinov, D.V, Lazarev, V.N.
Deposit date:2022-02-01
Release date:2023-02-15
Method:SOLUTION NMR
Cite:The study of the interaction of cationic peptides from a medical leech with blood components as a first step to the systemic use of antimicrobial peptides for therapy of infectious diseases
To Be Published
7W7R
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BU of 7w7r by Molmil
High resolution structure of a fish aquaporin reveals a novel extracellular fold.
Descriptor: Aquaporin 1
Authors:Zeng, J, Schmitz, F, Isaksson, S, Glas, J, Arbab, O, Andersson, M, Sundell, K, Eriksson, L, Swaminathan, K, Tornroth-Horsefield, S, Hedfalk, K.
Deposit date:2021-12-06
Release date:2022-10-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.46 Å)
Cite:High-resolution structure of a fish aquaporin reveals a novel extracellular fold.
Life Sci Alliance, 5, 2022
7VTJ
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BU of 7vtj by Molmil
The cross-reaction complex structure with VQIIYK peptide and tau antibody's Fab domain.
Descriptor: Heavy chain of Fab, Light chain of Fab, VQIIYK peptide
Authors:Tsuchida, T, Fukuhara, N, Tsuchiya, T, Miyamoto, K, In, Y, Minoura, K, Taniguchi, Y, Ishida, T, Tomoo, K.
Deposit date:2021-10-29
Release date:2022-11-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:The cross-reaction complex structure with VQIIYK peptide and tau antibody's Fab domain.
To Be Published
8CM3
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BU of 8cm3 by Molmil
Solution structure of Mu3.1 from Conus mucronatus
Descriptor: Mu3.1
Authors:Lushpa, V.A, Mineev, K.S, Vassilevski, A.A, Koroev, D.O.
Deposit date:2023-02-17
Release date:2024-02-28
Method:SOLUTION NMR
Cite:Spatial structure of Mu 3.1 from Conus mucronatus
To Be Published
3K1D
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BU of 3k1d by Molmil
Crystal structure of glycogen branching enzyme synonym: 1,4-alpha-D-glucan:1,4-alpha-D-GLUCAN 6-glucosyl-transferase from mycobacterium tuberculosis H37RV
Descriptor: 1,4-alpha-glucan-branching enzyme
Authors:Pal, K, Kumar, S, Swaminathan, K.
Deposit date:2009-09-27
Release date:2010-05-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Crystal structure of full-length Mycobacterium tuberculosis H37Rv glycogen branching enzyme: insights of N-terminal beta-sandwich in substrate specificity and enzymatic activity
J.Biol.Chem., 285, 2010
5ZU0
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BU of 5zu0 by Molmil
Proteobacterial origin of protein arginine methylation and regulation of Complex I assembly by MidA
Descriptor: Protein arginine methyltransferase NDUFAF7 homolog, mitochondrial, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Arold, S.T, Swaminathan, K, Hameed, U.F.S.
Deposit date:2018-05-05
Release date:2018-08-22
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (2.76 Å)
Cite:Proteobacterial Origin of Protein Arginine Methylation and Regulation of Complex I Assembly by MidA.
Cell Rep, 24, 2018
5ZZW
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BU of 5zzw by Molmil
Proteobacterial origin of protein arginine methylation and regulation of Complex I assembly by MidA
Descriptor: Protein arginine methyltransferase NDUFAF7 homolog, mitochondrial, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Arold, S.T, Swaminathan, K, Hameed, U.F.S.
Deposit date:2018-06-04
Release date:2018-08-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Proteobacterial Origin of Protein Arginine Methylation and Regulation of Complex I Assembly by MidA.
Cell Rep, 24, 2018
5DTO
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BU of 5dto by Molmil
Dengue virus full length NS5 complexed with viral Cap 0-RNA and SAH
Descriptor: 7N-METHYL-8-HYDROGUANOSINE-5'-DIPHOSPHATE, ACETATE ION, MAGNESIUM ION, ...
Authors:Zhao, Y, Soh, T.S, Lim, S.P, Chung, K.Y, Swaminathan, K, Vasudevan, S.G, Shi, P.-Y, Lescar, J, Luo, D.
Deposit date:2015-09-18
Release date:2015-11-25
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.603 Å)
Cite:Molecular basis for specific viral RNA recognition and 2'-O-ribose methylation by the dengue virus nonstructural protein 5 (NS5)
Proc.Natl.Acad.Sci.USA, 112, 2015
2MJO
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BU of 2mjo by Molmil
NMR structure of p75 transmembrane domain C257A mutant in DPC micelles
Descriptor: Tumor necrosis factor receptor superfamily member 16
Authors:Nadezhdin, K, Arseniev, A, Goncharuk, S, Mineev, K.
Deposit date:2014-01-15
Release date:2015-01-28
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Basis of p75 Transmembrane Domain Dimerization.
J. Biol. Chem., 291, 2016
8OYD
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BU of 8oyd by Molmil
TrkB transmembrane domain NMR structure in DMPC/DHPC bicelles
Descriptor: BDNF/NT-3 growth factors receptor
Authors:Kot, E.F, Mineev, K.S, Goncharuk, S.A.
Deposit date:2023-05-04
Release date:2024-05-15
Method:SOLUTION NMR
Cite:Structural Basis for the transmembrane signaling and antidepressant-induced activation of the receptor tyrosine kinase TrkB
To Be Published
6LKB
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BU of 6lkb by Molmil
Crystal Structure of the peptidylprolyl isomerase domain of Arabidopsis thaliana CYP71.
Descriptor: COBALT (II) ION, GLYCEROL, PHOSPHATE ION, ...
Authors:Lakhanpal, S, Jobichen, C, Swaminathan, K.
Deposit date:2019-12-18
Release date:2020-12-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.651 Å)
Cite:Structural and functional analyses of the PPIase domain of Arabidopsis thaliana CYP71 reveal its catalytic activity toward histone H3.
Febs Lett., 595, 2021
5GIM
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BU of 5gim by Molmil
Crystal structure of thrombin-avathrin complex
Descriptor: C-terminal peptide from Putative uncharacterized protein avahiru, N-terminal peptide from Putative uncharacterized protein avahiru, Thrombin light chain, ...
Authors:Kini, R.M, Koh, C.Y, Iyer, J.K, Swaminathan, K.
Deposit date:2016-06-24
Release date:2017-05-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Avathrin: a novel thrombin inhibitor derived from a multicopy precursor in the salivary glands of the ixodid tick, Amblyomma variegatum.
FASEB J., 31, 2017
3MFK
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BU of 3mfk by Molmil
Ets1 complex with stromelysin-1 promoter DNA
Descriptor: Protein C-ets-1, stromelysin-1 promoter DNA
Authors:Babayeva, N.D, Mino, K, Tahirov, T.H.
Deposit date:2010-04-02
Release date:2010-08-18
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis of Ets1 cooperative binding to palindromic sequences on stromelysin-1 promoter DNA.
Cell Cycle, 9, 2010
2LJ7
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BU of 2lj7 by Molmil
3D solution structure of plant defensin Lc-def
Descriptor: Defensin Lc-def
Authors:Shenkarev, Z, Mineev, K, Gizatullina, A.
Deposit date:2011-09-07
Release date:2012-09-12
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Heterologous expression and solution structure of defensin from lentil Lens culinaris.
Biochem.Biophys.Res.Commun., 451, 2014
2MIC
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BU of 2mic by Molmil
NMR structure of p75 transmembrane domain in DPC micelles
Descriptor: Tumor necrosis factor receptor superfamily member 16
Authors:Nadezhdin, K, Arseniev, A, Goncharuk, S, Mineev, K.
Deposit date:2013-12-12
Release date:2014-12-24
Last modified:2017-09-06
Method:SOLUTION NMR
Cite:Structural Basis of p75 Transmembrane Domain Dimerization.
J. Biol. Chem., 291, 2016
3N96
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BU of 3n96 by Molmil
Crystal structure of human CRFR2 alpha extracellular domain in complex with Urocortin 1
Descriptor: Maltose binding protein-CRFR2 alpha, Urocortin, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Pal, K, Swaminathan, K, Pioszak, A.A, Xu, H.E.
Deposit date:2010-05-28
Release date:2010-10-20
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structural basis of ligand selectivity in human CRFR1 and CRFR2 alpha extracellular domain
To be Published
3N93
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BU of 3n93 by Molmil
Crystal structure of human CRFR2 alpha extracellular domain in complex with Urocortin 3
Descriptor: GLYCEROL, Maltose binding protein-CRFR2 alpha, Urocortin-3, ...
Authors:Pal, K, Swaminathan, K, Pioszak, A.A, Xu, H.E.
Deposit date:2010-05-28
Release date:2010-10-20
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis of ligand selectivity in human CRFR1 and CRFR2 alpha extracellular domain
To be Published
2MAL
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BU of 2mal by Molmil
Solution structure of Lipid Transfer Protein from Lentil Lens Culinaris
Descriptor: Non-specific lipid-transfer protein 2
Authors:Gizatullina, A.K, Mineev, K.S, Shenkarev, Z.O.
Deposit date:2013-07-16
Release date:2013-10-02
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Recombinant production and solution structure of lipid transfer protein from lentil Lens culinaris.
Biochem.Biophys.Res.Commun., 439, 2013
3UB9
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BU of 3ub9 by Molmil
Periplasmic portion of the Helicobacter pylori chemoreceptor TlpB with hydroxyurea bound
Descriptor: GLYCEROL, N-HYDROXYUREA, SULFATE ION, ...
Authors:Henderson, J.N, Sweeney, E.G, Goers, J, Wreden, C, Hicks, K.G, Parthasarathy, R, Guillemin, K.J, Remington, S.J.
Deposit date:2011-10-23
Release date:2012-06-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Structure and proposed mechanism for the pH-sensing Helicobacter pylori chemoreceptor TlpB.
Structure, 20, 2012
7FGK
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BU of 7fgk by Molmil
The Fab antibody single structure against tau protein.
Descriptor: Fab Heavy Chain, Fab Light Chain, GLYCEROL, ...
Authors:Tsuchida, T, Susa, K, Kibiki, T, Tsuchiya, T, Miyamoto, K, In, Y, Minoura, K, Taniguchi, T, Ishida, T, Tomoo, K.
Deposit date:2021-07-27
Release date:2022-07-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The free structure of the Fab domain of antibody that recognizes the PHF core region VQIINK in Tau protein.
To Be Published
7FGJ
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BU of 7fgj by Molmil
The cross-reaction complex structure with VQILNK peptide and the tau antibody's Fab domain.
Descriptor: CHLORIDE ION, Fab Heavy Chain, Fab Light Chain, ...
Authors:Tsuchida, T, Tsuchiya, T, Miyamoto, K, In, Y, Minoura, K, Taniguchi, T, Ishida, T, Tomoo, K.
Deposit date:2021-07-27
Release date:2022-07-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:The cross-reaction complex structure with VQILNK peptide and the antibody's Fab domain.
To Be Published
7FGR
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BU of 7fgr by Molmil
The cross-reaction complex structure with VQIFNK peptide and the tau antibody's Fab domain.
Descriptor: AMMONIUM ION, CHLORIDE ION, Fab Heavy Chain, ...
Authors:Tsuchida, T, Tsuchiya, T, Miyamoto, K, In, Y, Minoura, K, Taniguchi, T, Ishida, T, Tomoo, K.
Deposit date:2021-07-27
Release date:2022-07-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The cross-reaction complex structure with VQIFNK peptide and the tau antibody's Fab domain.
To Be Published

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