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PDB: 215 件
9EQH
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BU of 9eqh by Molmil
WWP2 WW2-2,3-linker-HECT (WWP2-LH)
分子名称: GLYCEROL, Isoform 2 of NEDD4-like E3 ubiquitin-protein ligase WWP2, SODIUM ION
著者Dudey, A.P, Hemmings, A.M.
登録日2024-03-21
公開日2024-05-15
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Expanding the Inhibitor Space of the WWP1 and WWP2 HECT E3 Ligases
To Be Published
1TG7
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BU of 1tg7 by Molmil
Native structure of beta-galactosidase from Penicillium sp.
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Rojas, A.L, Nagem, R.A.P, Neustroev, K.N, Arand, M, Adamska, M, Eneyskaya, E.V, Kulminskaya, A.A, Garratt, R.C, Golubev, A.M, Polikarpov, I.
登録日2004-05-28
公開日2004-11-02
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structures of beta-Galactosidase from Penicillium sp. and its Complex with Galactose
J.Mol.Biol., 343, 2004
1SZN
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BU of 1szn by Molmil
THE STRUCTURE OF ALPHA-GALACTOSIDASE
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Golubev, A.M, Nagem, R.A.P, Brando Neto, J.R, Neustroev, K.N, Eneyskaya, E.V, Kulminskaya, A.A, Shabalin, K.A, Savel'ev, A.N, Polikarpov, I.
登録日2004-04-06
公開日2004-08-10
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Crystal structure of alpha-galactosidase from Trichoderma reesei and its complex with galactose: implications for catalytic mechanism.
J.Mol.Biol., 339, 2004
1T0O
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The structure of alpha-galactosidase from Trichoderma reesei complexed with beta-D-galactose
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Golubev, A.M, Nagem, R.A.P, Brandao Neto, J.R, Neustroev, K.N, Eneyskaya, E.V, Kulminskaya, A.A, Shabalin, K.A, Savel'ev, A.N, Polikarpov, I.
登録日2004-04-12
公開日2004-10-12
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Crystal structure of alpha-galactosidase from Trichoderma reesei and its complex with galactose: implications for catalytic mechanism
J.Mol.Biol., 339, 2004
3COD
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BU of 3cod by Molmil
Crystal Structure of T90A/D115A mutant of Bacteriorhodopsin
分子名称: Bacteriorhodopsin, RETINAL
著者Joh, N.H, Min, A, Faham, S, Bowie, J.U.
登録日2008-03-27
公開日2008-04-08
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Modest stabilization by most hydrogen-bonded side-chain interactions in membrane proteins.
Nature, 453, 2008
4RXI
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BU of 4rxi by Molmil
Structure of C-terminal domain of uncharacterized protein from Legionella pneumophila
分子名称: hypothetical protein lpg0944
著者Cuff, M, Nocek, B, Evdokimova, E, Egorova, O, Joachimiak, A, Ensminger, A, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
登録日2014-12-11
公開日2015-05-06
最終更新日2017-01-04
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Diverse mechanisms of metaeffector activity in an intracellular bacterial pathogen, Legionella pneumophila.
Mol Syst Biol, 12, 2016
4RXV
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BU of 4rxv by Molmil
The crystal structure of the N-terminal fragment of uncharacterized protein from Legionella pneumophila
分子名称: hypothetical protein lpg0944
著者Nocek, B, Cuff, M, Evdokimova, E, Egorova, O, Joachimiak, A, Ensminger, A, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
登録日2014-12-12
公開日2015-04-08
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.099 Å)
主引用文献Diverse mechanisms of metaeffector activity in an intracellular bacterial pathogen, Legionella pneumophila.
Mol Syst Biol, 12, 2016
7POG
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BU of 7pog by Molmil
High-resolution structure of native toxin A from Clostridioides difficile
分子名称: Toxin A, ZINC ION
著者Boesen, T, Joergensen, R, Aminzadeh, A, Engelbrecht Larsen, C.
登録日2021-09-08
公開日2021-12-08
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (2.83 Å)
主引用文献High-resolution structure of native toxin A from Clostridioides difficile.
Embo Rep., 23, 2022
6WF7
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BU of 6wf7 by Molmil
Methylmalonyl-CoA epimerase in complex with methylmalonyl-CoA and NH4+
分子名称: (S)-Methylmalonyl-Coenzyme A, AMMONIUM ION, METHYLMALONYL-COENZYME A, ...
著者Stunkard, L.M, Benjamin, A.B, Bower, J.B, Huth, T.J, Lohman, J.R.
登録日2020-04-03
公開日2020-07-08
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Substrate Enolate Intermediate and Mimic Captured in the Active Site of Streptomyces coelicolor Methylmalonyl-CoA Epimerase.
Chembiochem, 23, 2022
6WF6
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Streptomyces coelicolor methylmalonyl-CoA epimerase
分子名称: COBALT (II) ION, DI(HYDROXYETHYL)ETHER, Methylmalonyl-CoA epimerase
著者Stunkard, L.M, Benjamin, A.B, Bower, J.B, Huth, T.J, Lohman, J.R.
登録日2020-04-03
公開日2020-07-08
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.39 Å)
主引用文献Substrate Enolate Intermediate and Mimic Captured in the Active Site of Streptomyces coelicolor Methylmalonyl-CoA Epimerase.
Chembiochem, 23, 2022
6WFH
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BU of 6wfh by Molmil
Streptomyces coelicolor methylmalonyl-CoA epimerase substrate complex
分子名称: (3S,5R,9R,19E)-1-[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)tetrahydrofuran-2-yl]-3,5,9,19-tetrahydroxy-8,8,20-trimethyl-10,14-dioxo-2,4,6-trioxa-18-thia-11,15-diaza-3,5-diphosphahenicos-19-en-21-oic acid 3,5-dioxide (non-preferred name), CHLORIDE ION, COBALT (II) ION, ...
著者Stunkard, L.M, Benjamin, A.B, Bower, J.B, Huth, T.J, Lohman, J.R.
登録日2020-04-03
公開日2020-07-08
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Substrate Enolate Intermediate and Mimic Captured in the Active Site of Streptomyces coelicolor Methylmalonyl-CoA Epimerase.
Chembiochem, 23, 2022
6WFI
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BU of 6wfi by Molmil
Methylmalonyl-CoA epimerase in complex with 2-nitronate-propionyl-CoA
分子名称: CHLORIDE ION, COBALT (II) ION, DI(HYDROXYETHYL)ETHER, ...
著者Stunkard, L.M, Benjamin, A.B, Bower, J.B, Huth, T.J, Lohman, J.R.
登録日2020-04-03
公開日2020-07-08
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.37 Å)
主引用文献Substrate Enolate Intermediate and Mimic Captured in the Active Site of Streptomyces coelicolor Methylmalonyl-CoA Epimerase.
Chembiochem, 23, 2022
6XBS
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BU of 6xbs by Molmil
Streptomyces coelicolor methylmalonyl-CoA epimerase (E43Q) in complex with 2-nitronate-propionyl-CoA
分子名称: CHLORIDE ION, COBALT (II) ION, Methylmalonyl-CoA epimerase, ...
著者Stunkard, L.M, Boram, T.J, Benjamin, A.B, Bower, J.B, Lohman, J.R.
登録日2020-06-07
公開日2020-07-01
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Streptomyces coelicolor methylmalonyl-CoA epimerase (E43Q) in complex with 2-nitronate-propionyl-CoA
To Be Published
6XBQ
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BU of 6xbq by Molmil
Streptomyces coelicolor methylmalonyl-CoA epimerase in complex with carboxy-carba(dethia)-CoA
分子名称: CARBOXYMETHYLDETHIA COENZYME *A, COBALT (II) ION, Methylmalonyl-CoA epimerase, ...
著者Stunkard, L.M, Boram, T.J, Benjamin, A.B, Bower, J.B, Lohman, J.R.
登録日2020-06-07
公開日2020-07-01
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Streptomyces coelicolor methylmalonyl-CoA epimerase in complex with carboxy-carba(dethia)-CoA
To Be Published
6XBT
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BU of 6xbt by Molmil
Streptomyces coelicolor methylmalonyl-CoA epimerase (Q60A) in complex with 2-nitronate-propionyl-CoA
分子名称: COBALT (II) ION, COENZYME A, Methylmalonyl-CoA epimerase, ...
著者Stunkard, L.M, Boram, T.J, Benjamin, A.B, Bower, J.B, Lohman, J.R.
登録日2020-06-07
公開日2020-07-01
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Streptomyces coelicolor methylmalonyl-CoA epimerase (Q60A) in complex with 2-nitronate-propionyl-CoA
To Be Published
6XBR
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BU of 6xbr by Molmil
Streptomyces coelicolor methylmalonyl-CoA epimerase (E43L) in complex with 2-nitronate-propionyl-CoA
分子名称: AMMONIUM ION, CHLORIDE ION, COBALT (II) ION, ...
著者Stunkard, L.M, Boram, T.J, Benjamin, A.B, Bower, J.B, Lohman, J.R.
登録日2020-06-07
公開日2020-07-01
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Streptomyces coelicolor methylmalonyl-CoA epimerase (E43L) in complex with 2-nitronate-propionyl-CoA
To Be Published
6XBV
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BU of 6xbv by Molmil
Streptomyces coelicolor methylmalonyl-CoA epimerase (S115T) in complex with 2-nitronate-propionyl-CoA
分子名称: CHLORIDE ION, COBALT (II) ION, Methylmalonyl-CoA epimerase, ...
著者Stunkard, L.M, Boram, T.J, Benjamin, A.B, Bower, J.B, Lohman, J.R.
登録日2020-06-07
公開日2020-07-01
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Streptomyces coelicolor methylmalonyl-CoA epimerase (S115T) in complex with 2-nitronate-propionyl-CoA
To Be Published
4XKT
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BU of 4xkt by Molmil
E coli BFR variant Y149F
分子名称: Bacterioferritin, SULFATE ION
著者Bradley, J.M, Hemmings, A.M, Le Brun, N.E.
登録日2015-01-12
公開日2015-12-16
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Three Aromatic Residues are Required for Electron Transfer during Iron Mineralization in Bacterioferritin.
Angew.Chem.Int.Ed.Engl., 54, 2015
6P1Q
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BU of 6p1q by Molmil
Post-catalytic nicked complex of human DNA Polymerase Mu with 1-nt gapped substrate containing template 8OG and newly incorporated dCMP
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, DNA (5'-D(*CP*GP*GP*CP*(8OG)P*TP*AP*CP*G)-3'), ...
著者Pedersen, L.C, Kaminski, A.M, Bebenek, K, Chiruvella, K.K, Ramsden, D.A, Kunkel, T.A.
登録日2019-05-20
公開日2019-09-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Unexpected behavior of DNA polymerase Mu opposite template 8-oxo-7,8-dihydro-2'-guanosine.
Nucleic Acids Res., 47, 2019
6RXD
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BU of 6rxd by Molmil
Crystal Structure of Bifidobacterium longum Multiple Inositol Polyphosphate Phosphatase Apo Form
分子名称: Histidine acid phosphatase, ZINC ION
著者Li, A.W.H, Brearley, C.A, Hemmings, A.M.
登録日2019-06-07
公開日2020-07-08
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Snapshots during the catalytic cycle of a histidine acid phytase reveal an induced-fit structural mechanism.
J.Biol.Chem., 295, 2020
6RXE
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BU of 6rxe by Molmil
Crystal Structure of Bifidobacterium longum Multiple Inositol Polyphosphate Phosphatase Complex with Inositol Hexasulfate
分子名称: D-MYO-INOSITOL-HEXASULPHATE, Histidine acid phosphatase, PHOSPHATE ION
著者Acquistapace, I.M, Brearley, C.A, Hemmings, A.M.
登録日2019-06-07
公開日2020-07-08
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Snapshots during the catalytic cycle of a histidine acid phytase reveal an induced-fit structural mechanism.
J.Biol.Chem., 295, 2020
6RXG
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BU of 6rxg by Molmil
Crystal Structure of Bifidobacterium longum Multiple Inositol Polyphosphate Phosphatase Complex with Phosphate
分子名称: Histidine acid phosphatase, PHOSPHATE ION, ZINC ION
著者Zietek, M.A.Z, Brearley, C.A, Hemmings, A.M.
登録日2019-06-07
公開日2020-07-08
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Snapshots during the catalytic cycle of a histidine acid phytase reveal an induced-fit structural mechanism.
J.Biol.Chem., 295, 2020
6RXF
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BU of 6rxf by Molmil
Crystal Structure of Bifidobacterium longum Multiple Inositol Polyphosphate Phosphatase Phosphohistidine Intermediate
分子名称: Histidine acid phosphatase, ZINC ION
著者Acquistapace, I.M, Brearley, C.A, Hemmings, A.M.
登録日2019-06-07
公開日2020-07-08
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.397 Å)
主引用文献Snapshots during the catalytic cycle of a histidine acid phytase reveal an induced-fit structural mechanism.
J.Biol.Chem., 295, 2020
5Y78
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BU of 5y78 by Molmil
Crystal structure of the triose-phosphate/phosphate translocator in complex with inorganic phosphate
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, PHOSPHATE ION, Putative hexose phosphate translocator
著者Lee, Y, Nishizawa, T, Takemoto, M, Kumazaki, K, Yamashita, K, Hirata, K, Minoda, A, Nagatoishi, S, Tsumoto, K, Ishitani, R, Nureki, O.
登録日2017-08-16
公開日2017-10-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of the triose-phosphate/phosphate translocator reveals the basis of substrate specificity
Nat Plants, 3, 2017
5Y79
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Crystal structure of the triose-phosphate/phosphate translocator in complex with 3-phosphoglycerate
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 3-PHOSPHOGLYCERIC ACID, CITRATE ANION, ...
著者Lee, Y, Nishizawa, T, Takemoto, M, Kumazaki, K, Yamashita, K, Hirata, K, Minoda, A, Nagatoishi, S, Tsumoto, K, Ishitani, R, Nureki, O.
登録日2017-08-16
公開日2017-10-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of the triose-phosphate/phosphate translocator reveals the basis of substrate specificity
Nat Plants, 3, 2017

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