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PDB: 511 results

7OAO
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BU of 7oao by Molmil
Nanobody C5 bound to RBD
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, C5 nanobody, ...
Authors:Naismith, J.H, Mikolajek, H.
Deposit date:2021-04-19
Release date:2021-08-11
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:A potent SARS-CoV-2 neutralising nanobody shows therapeutic efficacy in the Syrian golden hamster model of COVID-19.
Nat Commun, 12, 2021
7S6F
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BU of 7s6f by Molmil
Crystal structure of UrtA1 from Synechococcus WH8102 in complex with urea and calcium
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Putative urea ABC transporter, ...
Authors:Shah, B.S, Mikolajek, H, Orr, C.M, Mykhaylyk, V, Owens, R.J, Paulsen, I.T.
Deposit date:2021-09-14
Release date:2021-10-20
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of UrtA1 from Synechococcus WH8102 in complex with urea and calcium
To Be Published
7S6E
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BU of 7s6e by Molmil
Crystal structure of UrtA from Synechococcus CC9311 in complex with urea and calcium
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Shah, B.S, Mikolajek, H, Mykhaylyk, V, Orr, C.M, Owens, R.J, Paulsen, I.T.
Deposit date:2021-09-14
Release date:2021-10-13
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.973 Å)
Cite:Crystal structure of UrtA from Synechococcus CC9311 in complex with urea and calcium
To Be Published
8BS8
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BU of 8bs8 by Molmil
Bovine naive ultralong antibody AbD08 collected at 100K
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Heavy chain, Light chain
Authors:Clarke, J.D, Douangamath, A, Mikolajek, H, Stuart, D.I, Owens, R.J.
Deposit date:2022-11-24
Release date:2023-05-24
Last modified:2024-07-17
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:The impact of exchanging the light and heavy chains on the structures of bovine ultralong antibodies.
Acta Crystallogr.,Sect.F, 80, 2024
6SEL
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BU of 6sel by Molmil
Multicrystal structure of Thermolysin at room temperature using a multilayer monochromator.
Descriptor: CALCIUM ION, ISOLEUCINE, LYSINE, ...
Authors:Sandy, J, Sanchez-Weatherby, J, Mikolajek, H.
Deposit date:2019-07-30
Release date:2019-08-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Protein-to-structure pipeline for ambient-temperature crystallography at VMXi
Iucrj, 2023
6RZP
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BU of 6rzp by Molmil
Multicrystal structure of Proteinase K at room temperature using a multilayer monochromator.
Descriptor: CALCIUM ION, CHLORIDE ION, GLYCEROL, ...
Authors:Sandy, J, Sandy, E, Sanchez-Weatherby, J, Mikolajek, H.
Deposit date:2019-06-13
Release date:2019-07-17
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Protein-to-structure pipeline for ambient-temperature crystallography at VMXi
Iucrj, 2023
6RVO
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BU of 6rvo by Molmil
Multicrystal dataset of thaumatin collected using a multilayer monochromator.
Descriptor: L(+)-TARTARIC ACID, Thaumatin I
Authors:Sandy, J, Sanchez-Weatherby, J, Mikolajek, H, Winter, G.
Deposit date:2019-05-31
Release date:2019-06-19
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Protein-to-structure pipeline for ambient-temperature crystallography at VMXi
Iucrj, 2023
6SVA
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BU of 6sva by Molmil
Multicrystal structure of equine Haemoglobin at room temperature using a multilayer monochromator.
Descriptor: Hemoglobin subunit alpha, Hemoglobin subunit beta, PROTOPORPHYRIN IX CONTAINING FE
Authors:Sandy, J, Sanchez-Weatherby, J, Mikolajek, H, Lewis, G, Angus, R.
Deposit date:2019-09-18
Release date:2019-11-20
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Protein-to-structure pipeline for ambient-temperature crystallography at VMXi
Iucrj, 2023
8RGY
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BU of 8rgy by Molmil
Serial synchrotron in plate room temperature structure of Dye Type Peroxidase Aa, 8 drops merged
Descriptor: Deferrochelatase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Thompson, A.J, Hough, M.A, Williams, L.J, Worrall, J.A.R, Sanchez-Weatherby, J, Mikolajek, H, Sandy, J.
Deposit date:2023-12-14
Release date:2023-12-27
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Efficient in situ screening of and data collection from microcrystals in crystallization plates.
Acta Crystallogr D Struct Biol, 80, 2024
8RGS
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BU of 8rgs by Molmil
Serial synchrotron in plate room temperature structure of Dye Type Peroxidase Aa
Descriptor: Deferrochelatase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Thompson, A.J, Hough, M.A, Williams, L.J, Worrall, J.A.R, Sanchez-Weatherby, J, Mikolajek, H, Sandy, J.
Deposit date:2023-12-14
Release date:2023-12-27
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Efficient in situ screening of and data collection from microcrystals in crystallization plates.
Acta Crystallogr D Struct Biol, 80, 2024
8RGW
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BU of 8rgw by Molmil
Serial synchrotron in plate room temperature structure of Dye Type Peroxidase Aa, 12 drops merged
Descriptor: Deferrochelatase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Thompson, A.J, Hough, M.A, Williams, L.J, Worrall, J.A.R, Sanchez-Weatherby, J, Mikolajek, H, Sandy, J.
Deposit date:2023-12-14
Release date:2023-12-27
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Efficient in situ screening of and data collection from microcrystals in crystallization plates.
Acta Crystallogr D Struct Biol, 80, 2024
6ZBP
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BU of 6zbp by Molmil
H11-H4 complex with SARS-CoV-2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, H11-H4, SULFATE ION, ...
Authors:Naismith, J.H, Huo, J, Mikolajek, H, Ward, P, Dumoux, M, Owens, R.J, LeBas, A.
Deposit date:2020-06-08
Release date:2020-07-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:H11-D4 complex with SARS-CoV-2 RBD
To Be Published
8B3Y
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BU of 8b3y by Molmil
Native Thermogutta terrifontis endoglucanase catalytic domain with a linker at C-terminal from glycoside hydrolase family 5 (TtEnd5A-CDC)
Descriptor: Endoglucanase, SULFATE ION
Authors:Hussain, N, Naismith, J.H, Mikolajek, H.
Deposit date:2022-09-17
Release date:2022-10-12
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Native Thermogutta terrifontis endoglucanase catalytic domain and linker at C-terminal from glycoside hydrolase family 5 (TtEnd5A-CDC)
To Be Published
8P6H
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BU of 8p6h by Molmil
Bovine naive ultralong antibody AbBLV5B8* collected at 100K
Descriptor: Antibody BLV5B8* heavy chain, Antibody BLV5B8* light chain
Authors:Clarke, J.D, Douangamath, A, Mikolajek, H, Stuart, D.I, Owens, R.J.
Deposit date:2023-05-26
Release date:2024-07-10
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:The impact of chain-exchange on bovine ultralong immunoglobulins.
Acta Crystallographica Section F, 2023
8P2T
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BU of 8p2t by Molmil
Bovine naive ultralong antibody AbD08* collected at 100K
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, Antibody D08* heavy chain, Antibody D08* light chain, ...
Authors:Clarke, J.D, Douangamath, A, Mikolajek, H, Stuart, D.I, Owens, R.J.
Deposit date:2023-05-16
Release date:2024-07-10
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:The impact of chain-exchange on bovine ultralong immunoglobulins.
Acta Crystallographica Section F, 2024
7Z59
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BU of 7z59 by Molmil
SARS-CoV-2 main protease (Mpro) covalently modified with a penicillin derivative
Descriptor: (3S)-4-[[2,4-bis(fluoranyl)phenyl]methoxy]-2-methyl-4-oxidanylidene-3-[[(Z)-3-oxidanylidene-2-(2-phenoxyethanoylamino)prop-1-enyl]amino]butane-2-sulfinic acid, 1,2-ETHANEDIOL, 3C-like proteinase nsp5
Authors:Owen, C.D, Malla, T.R, Brewitz, L, Lukacik, P, Strain-Damerell, C, Mikolajek, H, Muntean, D.G, Aslam, H, Salah, E, Tumber, A, Schofield, C.J, Walsh, M.A.
Deposit date:2022-03-08
Release date:2022-06-29
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Penicillin Derivatives Inhibit the SARS-CoV-2 Main Protease by Reaction with Its Nucleophilic Cysteine.
J.Med.Chem., 65, 2022
6YZ5
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BU of 6yz5 by Molmil
H11-D4 complex with SARS-CoV-2 RBD
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, ...
Authors:Naismith, J.H, Huo, J, Mikolajek, H, Ward, P, Dumoux, M, Owens, R.J, Le Bas, A.
Deposit date:2020-05-06
Release date:2020-06-03
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:H11-D4 complex with SARS-CoV-2 RBD
To Be Published
8A9D
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BU of 8a9d by Molmil
Multicrystal room temperature structure of Lysozyme collected using a double multilayer monochromator.
Descriptor: Lysozyme, SODIUM ION
Authors:Sandy, J, Cheruvara, H, Mikolajek, H, Sanchez-Weatherby, J.
Deposit date:2022-06-28
Release date:2022-07-20
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Protein-to-structure pipeline for ambient-temperature in situ crystallography at VMXi.
Iucrj, 10, 2023
8ANX
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BU of 8anx by Molmil
E329A Mutant Thermogutta terrifontis endoglucanase catalytic domain with C-linker from glycoside hydrolase family 5 (TtEnd5A-CDC-E329A)
Descriptor: Endoglucanase
Authors:Hussain, N, Mikolajek, H, Naismith, J.H.
Deposit date:2022-08-06
Release date:2022-08-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:TtEnd5A-CDC-E329A
To Be Published
8AG9
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BU of 8ag9 by Molmil
Thermogutta terrifontis endoglucanase of glycoside hydrolase family 5 (TtEnd5A)
Descriptor: Endoglucanase, SULFATE ION
Authors:Hussain, N, Mikolajek, H, Naismith, J.H.
Deposit date:2022-07-19
Release date:2022-08-17
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Thermogutta terrifontis endoglucanase of glycoside hydrolase family 5 (TtEnd5A)
To Be Published
7GB6
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BU of 7gb6 by Molmil
Group deposition SARS-CoV-2 main protease in complex with inhibitors from the COVID Moonshot -- Crystal Structure of SARS-CoV-2 main protease in complex with JOR-UNI-2fc98d0b-12 (Mpro-x10236)
Descriptor: 3C-like proteinase, DIMETHYL SULFOXIDE, N-(3-chlorophenyl)-N-(2-cyclohexylethyl)-N'-(pyridin-3-yl)urea
Authors:Fearon, D, Aimon, A, Aschenbrenner, J.C, Balcomb, B.H, Bertram, F.K.R, Brandao-Neto, J, Dias, A, Douangamath, A, Dunnett, L, Godoy, A.S, Gorrie-Stone, T.J, Koekemoer, L, Krojer, T, Lithgo, R.M, Lukacik, P, Marples, P.G, Mikolajek, H, Nelson, E, Owen, C.D, Powell, A.J, Rangel, V.L, Skyner, R, Strain-Damerell, C.M, Thompson, W, Tomlinson, C.W.E, Wild, C, Walsh, M.A, von Delft, F.
Deposit date:2023-08-11
Release date:2023-11-08
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Open science discovery of potent noncovalent SARS-CoV-2 main protease inhibitors.
Science, 382, 2023
7GBN
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BU of 7gbn by Molmil
Group deposition SARS-CoV-2 main protease in complex with inhibitors from the COVID Moonshot -- Crystal Structure of SARS-CoV-2 main protease in complex with RAL-MED-2de63afb-14 (Mpro-x10387)
Descriptor: 3C-like proteinase, DIMETHYL SULFOXIDE, N-(3-fluoro-5-{[(2S)-4-oxoazetidin-2-yl]oxy}phenyl)-2-(pyrimidin-5-yl)acetamide
Authors:Fearon, D, Aimon, A, Aschenbrenner, J.C, Balcomb, B.H, Bertram, F.K.R, Brandao-Neto, J, Dias, A, Douangamath, A, Dunnett, L, Godoy, A.S, Gorrie-Stone, T.J, Koekemoer, L, Krojer, T, Lithgo, R.M, Lukacik, P, Marples, P.G, Mikolajek, H, Nelson, E, Owen, C.D, Powell, A.J, Rangel, V.L, Skyner, R, Strain-Damerell, C.M, Thompson, W, Tomlinson, C.W.E, Wild, C, Walsh, M.A, von Delft, F.
Deposit date:2023-08-11
Release date:2023-11-08
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.944 Å)
Cite:Open science discovery of potent noncovalent SARS-CoV-2 main protease inhibitors.
Science, 382, 2023
7GC2
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BU of 7gc2 by Molmil
Group deposition SARS-CoV-2 main protease in complex with inhibitors from the COVID Moonshot -- Crystal Structure of SARS-CoV-2 main protease in complex with BEN-DND-93268d01-13 (Mpro-x10484)
Descriptor: 3-methyl-N-(4-methylpyridin-3-yl)-3-phenylbutanamide, 3C-like proteinase, DIMETHYL SULFOXIDE
Authors:Fearon, D, Aimon, A, Aschenbrenner, J.C, Balcomb, B.H, Bertram, F.K.R, Brandao-Neto, J, Dias, A, Douangamath, A, Dunnett, L, Godoy, A.S, Gorrie-Stone, T.J, Koekemoer, L, Krojer, T, Lithgo, R.M, Lukacik, P, Marples, P.G, Mikolajek, H, Nelson, E, Owen, C.D, Powell, A.J, Rangel, V.L, Skyner, R, Strain-Damerell, C.M, Thompson, W, Tomlinson, C.W.E, Wild, C, Walsh, M.A, von Delft, F.
Deposit date:2023-08-11
Release date:2023-11-08
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.731 Å)
Cite:Open science discovery of potent noncovalent SARS-CoV-2 main protease inhibitors.
Science, 382, 2023
7GB8
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BU of 7gb8 by Molmil
Group deposition SARS-CoV-2 main protease in complex with inhibitors from the COVID Moonshot -- Crystal Structure of SARS-CoV-2 main protease in complex with JAN-GHE-83b26c96-14 (Mpro-x10247)
Descriptor: 3C-like proteinase, DIMETHYL SULFOXIDE, N-(4-methylpyridin-3-yl)-2-[3-(trifluoromethyl)phenyl]acetamide
Authors:Fearon, D, Aimon, A, Aschenbrenner, J.C, Balcomb, B.H, Bertram, F.K.R, Brandao-Neto, J, Dias, A, Douangamath, A, Dunnett, L, Godoy, A.S, Gorrie-Stone, T.J, Koekemoer, L, Krojer, T, Lithgo, R.M, Lukacik, P, Marples, P.G, Mikolajek, H, Nelson, E, Owen, C.D, Powell, A.J, Rangel, V.L, Skyner, R, Strain-Damerell, C.M, Thompson, W, Tomlinson, C.W.E, Wild, C, Walsh, M.A, von Delft, F.
Deposit date:2023-08-11
Release date:2023-11-08
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.957 Å)
Cite:Open science discovery of potent noncovalent SARS-CoV-2 main protease inhibitors.
Science, 382, 2023
7GBK
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BU of 7gbk by Molmil
Group deposition SARS-CoV-2 main protease in complex with inhibitors from the COVID Moonshot -- Crystal Structure of SARS-CoV-2 main protease in complex with ALP-POS-95b75b4d-2 (Mpro-x10359)
Descriptor: 2-(3-hydroxyphenyl)-N-(4-methylpyridin-3-yl)acetamide, 3C-like proteinase, DIMETHYL SULFOXIDE
Authors:Fearon, D, Aimon, A, Aschenbrenner, J.C, Balcomb, B.H, Bertram, F.K.R, Brandao-Neto, J, Dias, A, Douangamath, A, Dunnett, L, Godoy, A.S, Gorrie-Stone, T.J, Koekemoer, L, Krojer, T, Lithgo, R.M, Lukacik, P, Marples, P.G, Mikolajek, H, Nelson, E, Owen, C.D, Powell, A.J, Rangel, V.L, Skyner, R, Strain-Damerell, C.M, Thompson, W, Tomlinson, C.W.E, Wild, C, Walsh, M.A, von Delft, F.
Deposit date:2023-08-11
Release date:2023-11-08
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Open science discovery of potent noncovalent SARS-CoV-2 main protease inhibitors.
Science, 382, 2023

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PDB entries from 2024-10-30

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