6A4U
| The first crystal structure of crustacean ferritin that is a hybrid type of H and L ferritin | 分子名称: | 1,2-ETHANEDIOL, CHLORIDE ION, Ferritin, ... | 著者 | Masuda, T, Mikami, B, Zang, J, Zhao, G. | 登録日 | 2018-06-21 | 公開日 | 2018-08-22 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (1.16 Å) | 主引用文献 | The first crystal structure of crustacean ferritin that is a hybrid type of H and L ferritin Protein Sci., 27, 2018
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1VAV
| Crystal structure of alginate lyase PA1167 from Pseudomonas aeruginosa at 2.0 A resolution | 分子名称: | Alginate lyase PA1167 | 著者 | Yamasaki, M, Moriwaki, S, Miyake, O, Hashimoto, W, Murata, K, Mikami, B. | 登録日 | 2004-02-19 | 公開日 | 2004-05-25 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Structure and function of a hypothetical Pseudomonas aeruginosa protein PA1167 classified into family PL-7: a novel alginate lyase with a beta-sandwich fold. J.Biol.Chem., 279, 2004
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3X2Z
| Crystal structure of metallo-beta-lactamase in complex with nickel from Thermotoga maritima | 分子名称: | NICKEL (II) ION, UPF0173 metal-dependent hydrolase TM_1162 | 著者 | Choi, H.J, Kim, H.J, Matsuura, A, Mikami, B, Yoon, H.J, Lee, H.H. | 登録日 | 2015-01-07 | 公開日 | 2016-02-17 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (2.33 Å) | 主引用文献 | Crystal structure of metallo-beta-lactamase in complex with nickel from Thermotoga maritima To be Published
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1Q1Y
| Crystal Structures of Peptide Deformylase from Staphylococcus aureus Complexed with Actinonin | 分子名称: | ACTINONIN, Peptide deformylase, ZINC ION | 著者 | Yoon, H.J, Lee, S.K, Kim, H.L, Kim, H.W, Kim, H.W, Lee, J.Y, Mikami, B, Suh, S.W. | 登録日 | 2003-07-23 | 公開日 | 2004-07-23 | 最終更新日 | 2017-02-08 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Crystal structure of peptide deformylase from Staphylococcus aureus in complex with actinonin, a naturally occurring antibacterial agent Proteins, 57, 2004
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3VLW
| Crystal structure of Sphingomonas sp. A1 alginate-binding protein AlgQ1 in complex with mannuronate-guluronate disaccharide | 分子名称: | AlgQ1, CALCIUM ION, GLYCEROL, ... | 著者 | Nishitani, Y, Maruyama, Y, Itoh, T, Mikami, B, Hashimoto, W, Murata, K. | 登録日 | 2011-12-05 | 公開日 | 2012-01-25 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Recognition of heteropolysaccharide alginate by periplasmic solute-binding proteins of a bacterial ABC transporter Biochemistry, 51, 2012
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3VLU
| Crystal structure of Sphingomonas sp. A1 alginate-binding protein AlgQ1 in complex with saturated trimannuronate | 分子名称: | AlgQ1, CALCIUM ION, beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid | 著者 | Nishitani, Y, Maruyama, Y, Itoh, T, Mikami, B, Hashimoto, W, Murata, K. | 登録日 | 2011-12-05 | 公開日 | 2012-01-25 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.55 Å) | 主引用文献 | Recognition of heteropolysaccharide alginate by periplasmic solute-binding proteins of a bacterial ABC transporter Biochemistry, 51, 2012
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3X2Y
| Crystal structure of metallo-beta-lactamase H8A from Thermotoga maritima | 分子名称: | NICKEL (II) ION, UPF0173 metal-dependent hydrolase TM_1162 | 著者 | Choi, H.J, Kim, H.J, Matsuura, A, Mikami, B, Yoon, H.J, Lee, H.H. | 登録日 | 2015-01-07 | 公開日 | 2016-02-17 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (2.67 Å) | 主引用文献 | Crystal structure of metallo-beta-lactamase H8A from Thermotoga maritima To be Published
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3X2X
| Crystal structure of metallo-beta-lactamase H48A from Thermotoga maritima | 分子名称: | MANGANESE (II) ION, UPF0173 metal-dependent hydrolase TM_1162 | 著者 | Choi, H.J, Kim, H.J, Matsuura, A, Mikami, B, Yoon, H.J, Lee, H.H. | 登録日 | 2015-01-07 | 公開日 | 2016-02-17 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (3.42 Å) | 主引用文献 | Crystal structure of metallo-beta-lactamase H48A from Thermotoga maritima To be Published
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1TFA
| OVOTRANSFERRIN, N-TERMINAL LOBE, APO FORM | 分子名称: | PROTEIN (OVOTRANSFERRIN), SULFATE ION | 著者 | Mizutani, K, Yamashita, H, Mikami, B, Hirose, M. | 登録日 | 1999-01-07 | 公開日 | 1999-01-13 | 最終更新日 | 2018-04-04 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Alternative structural state of transferrin. The crystallographic analysis of iron-loaded but domain-opened ovotransferrin N-lobe. J.Biol.Chem., 274, 1999
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1V73
| Crystal Structure of Cold-Active Protein-Tyrosine Phosphatase of a Psychrophile Shewanella SP. | 分子名称: | ACETIC ACID, CALCIUM ION, psychrophilic phosphatase I | 著者 | Tsuruta, H, Mikami, B, Aizono, Y. | 登録日 | 2003-12-09 | 公開日 | 2005-03-01 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (1.82 Å) | 主引用文献 | Crystal Structure of Cold-Active Protein-Tyrosine Phosphatase from a Psychrophile, Shewanella sp J.Biochem.(Tokyo), 137, 2005
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5XCA
| Crystal structure of GH45 endoglucanase EG27II D137A mutant in complex with cellobiose | 分子名称: | Endo-beta-1,4-glucanase, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose | 著者 | Nomura, T, Mizutani, K, Iwase, H, Takahashi, N, Mikami, B. | 登録日 | 2017-03-22 | 公開日 | 2018-03-28 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (1.35 Å) | 主引用文献 | High-resolution crystal structures of the glycoside hydrolase family 45 endoglucanase EG27II from the snail Ampullaria crossean. Acta Crystallogr D Struct Biol, 75, 2019
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5XBX
| Crystal structure of GH45 endoglucanase EG27II in complex with cellobiose | 分子名称: | Endo-beta-1,4-glucanase, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose | 著者 | Nomura, T, Mizutani, K, Iwase, H, Takahashi, N, Mikami, B. | 登録日 | 2017-03-21 | 公開日 | 2018-03-28 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (1.04 Å) | 主引用文献 | High-resolution crystal structures of the glycoside hydrolase family 45 endoglucanase EG27II from the snail Ampullaria crossean. Acta Crystallogr D Struct Biol, 75, 2019
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5XC8
| Crystal structure of GH45 endoglucanase EG27II at pH5.5, in complex with cellobiose | 分子名称: | Endo-beta-1,4-glucanase, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose | 著者 | Nomura, T, Mizutani, K, Iwase, H, Takahashi, N, Mikami, B. | 登録日 | 2017-03-22 | 公開日 | 2018-03-28 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (1.45 Å) | 主引用文献 | High-resolution crystal structures of the glycoside hydrolase family 45 endoglucanase EG27II from the snail Ampullaria crossean. Acta Crystallogr D Struct Biol, 75, 2019
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5XS8
| Crystal structure of solute-binding protein complexed with unsaturated chondroitin disaccharide with two sulfate groups at C-4 and C-6 positions of GalNAc | 分子名称: | 4-deoxy-alpha-L-threo-hex-4-enopyranuronic acid-(1-3)-2-acetamido-2-deoxy-4,6-di-O-sulfo-beta-D-galactopyranose, CALCIUM ION, Extracellular solute-binding protein family 1 | 著者 | Oiki, S, Kamochi, R, Mikami, B, Murata, K, Hashimoto, W. | 登録日 | 2017-06-12 | 公開日 | 2018-01-17 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (1.952 Å) | 主引用文献 | Alternative substrate-bound conformation of bacterial solute-binding protein involved in the import of mammalian host glycosaminoglycans. Sci Rep, 7, 2017
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5XC4
| Crystal structure of GH45 endoglucanase EG27II at pH4.0, in complex with cellobiose | 分子名称: | Endo-beta-1,4-glucanase, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose | 著者 | Nomura, T, Mizutani, K, Iwase, H, Takahashi, N, Mikami, B. | 登録日 | 2017-03-22 | 公開日 | 2018-03-28 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (1.42 Å) | 主引用文献 | High-resolution crystal structures of the glycoside hydrolase family 45 endoglucanase EG27II from the snail Ampullaria crossean. Acta Crystallogr D Struct Biol, 75, 2019
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5XC9
| Crystal structure of GH45 endoglucanase EG27II at pH8.0, in complex with cellobiose | 分子名称: | Endo-beta-1,4-glucanase, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose | 著者 | Nomura, T, Mizutani, K, Iwase, H, Takahashi, N, Mikami, B. | 登録日 | 2017-03-22 | 公開日 | 2018-03-28 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (1.28 Å) | 主引用文献 | High-resolution crystal structures of the glycoside hydrolase family 45 endoglucanase EG27II from the snail Ampullaria crossean. Acta Crystallogr D Struct Biol, 75, 2019
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1Q6C
| Crystal Structure of Soybean Beta-Amylase Complexed with Maltose | 分子名称: | SULFATE ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, beta-amylase | 著者 | Hirata, A, Adachi, M, Sekine, A, Kang, Y.N, Utsumi, S, Mikami, B. | 登録日 | 2003-08-13 | 公開日 | 2004-02-24 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (1.86 Å) | 主引用文献 | Structural and Enzymatic Analysis of Soybean {beta}-Amylase Mutants with Increased pH Optimum J.Biol.Chem., 279, 2004
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1WW5
| Agrocybe cylindracea galectin complexed with 3'-sulfonyl lactose | 分子名称: | 3-O-sulfo-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, galectin | 著者 | Ban, M, Yoon, H.J, Demirkan, E, Utsumi, S, Mikami, B, Yagi, F. | 登録日 | 2005-01-03 | 公開日 | 2005-08-23 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Structural Basis of a Fungal Galectin from Agrocybe cylindracea for Recognizing Sialoconjugate J.Mol.Biol., 351, 2005
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3VXD
| Crystal structure of unsaturated glucuronyl hydrolase mutant D115N from Streptcoccus agalactiae | 分子名称: | Putative uncharacterized protein gbs1889, SULFATE ION | 著者 | Nakamichi, Y, Maruyama, Y, Mikami, B, Hashimoto, W, Murata, K. | 登録日 | 2012-09-11 | 公開日 | 2012-10-03 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Crystal structure of unsaturated glucuronyl hydrolase mutant D115N from Streptcoccus agalactiae To be Published
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5Z6B
| Crystal structure of sugar-binding protein YesO in complex with rhamnogalacturonan trisaccharide | 分子名称: | 2,6-anhydro-3-deoxy-L-threo-hex-2-enonic acid-(1-2)-[beta-D-galactopyranose-(1-4)]alpha-L-rhamnopyranose, Putative ABC transporter substrate-binding protein YesO | 著者 | Sugiura, H, Oiki, S, Mikami, B, Murata, K, Hashimoto, W. | 登録日 | 2018-01-22 | 公開日 | 2019-01-23 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (1.582 Å) | 主引用文献 | Crystal structure of sugar-binding protein YesO in complex with rhamnogalacturonan trisaccharide To Be Published
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1V3H
| The roles of Glu186 and Glu380 in the catalytic reaction of soybean beta-amylase | 分子名称: | Beta-amylase, SULFATE ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose | 著者 | Kang, Y.N, Adachi, M, Utsumi, S, Mikami, B. | 登録日 | 2003-11-02 | 公開日 | 2004-06-22 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | 主引用文献 | The Roles of Glu186 and Glu380 in the Catalytic Reaction of Soybean beta-Amylase. J.Mol.Biol., 339, 2004
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1WW6
| Agrocybe cylindracea galectin complexed with lactose | 分子名称: | beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, galectin | 著者 | Ban, M, Yoon, H.J, Demirkan, E, Utsumi, S, Mikami, B, Yagi, F. | 登録日 | 2005-01-03 | 公開日 | 2005-08-23 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Structural Basis of a Fungal Galectin from Agrocybe cylindracea for Recognizing Sialoconjugate J.Mol.Biol., 351, 2005
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1WW4
| Agrocybe cylindracea galectin complexed with NeuAca2-3lactose | 分子名称: | N-acetyl-alpha-neuraminic acid-(2-3)-alpha-D-galactopyranose-(1-4)-alpha-D-glucopyranose, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, galectin | 著者 | Ban, M, Yoon, H.J, Demirkan, E, Utsumi, S, Mikami, B, Yagi, F. | 登録日 | 2004-12-31 | 公開日 | 2005-08-23 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Structural Basis of a Fungal Galectin from Agrocybe cylindracea for Recognizing Sialoconjugate J.Mol.Biol., 351, 2005
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3VJQ
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3VHF
| plant thaumatin I at pH 8.0 | 分子名称: | GLYCEROL, Thaumatin I | 著者 | Masuda, T, Mikami, B, Kitabatake, N, Tani, F. | 登録日 | 2011-08-24 | 公開日 | 2012-05-16 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.39 Å) | 主引用文献 | Atomic structure of the sweet-tasting protein thaumatin I at pH 8.0 reveals the large disulfide-rich region in domain II to be sensitive to a pH change Biochem.Biophys.Res.Commun., 419, 2012
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