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PDB: 322 results
3VWO
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BU of 3vwo by Molmil
Crystal structure of peptidoglycan hydrolase mutant from Sphingomonas sp. A1
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Peptidoglycan hydrolase FlgJ
Authors:Maruyama, Y, Mikami, B, Hashimoto, W, Murata, K.
Deposit date:2012-08-30
Release date:2013-09-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.802 Å)
Cite:Crystal structure of peptidoglycan hydrolase mutant from Sphingomonas sp. A1
To be Published
3VHG
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BU of 3vhg by Molmil
Recombinant thaumatin I at PH 8.0
Descriptor: GLYCEROL, Thaumatin I
Authors:Masuda, T, Mikami, B, Kitabatake, N, Tani, F.
Deposit date:2011-08-24
Release date:2012-08-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1 Å)
Cite:Recombinat thaumatin I at pH 8.0
To be Published
3VLV
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Crystal structure of Sphingomonas sp. A1 alginate-binding ptotein AlgQ1 in complex with unsaturated triguluronate
Descriptor: 4-deoxy-alpha-L-erythro-hex-4-enopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid, AlgQ1, CALCIUM ION
Authors:Nishitani, Y, Maruyama, Y, Itoh, T, Mikami, B, Hashimoto, W, Murata, K.
Deposit date:2011-12-05
Release date:2012-01-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Recognition of heteropolysaccharide alginate by periplasmic solute-binding proteins of a bacterial ABC transporter
Biochemistry, 51, 2012
3WUX
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Crystal structure of unsaturated glucuronyl hydrolase mutant D115N/K370S from Streptococcus agalactiae
Descriptor: 1,2-ETHANEDIOL, Unsaturated chondroitin disaccharide hydrolase
Authors:Nakamichi, Y, Oiki, S, Mikami, B, Murata, K, Hashimoto, W.
Deposit date:2014-05-08
Release date:2014-05-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.792 Å)
Cite:Crystal structure of unsaturated glucuronyl hydrolase mutant D115N/K370S from Streptococcus agalactiae
to be published
3X3R
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BU of 3x3r by Molmil
Recombinant thaumatin in the presence of 1.0M PST and soaked 1 hr at 293K
Descriptor: L(+)-TARTARIC ACID, thaumatin I
Authors:Masuda, T, Okubo, K, Mikami, B.
Deposit date:2015-01-26
Release date:2016-02-03
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Structure of the recombinant thaumatin in the presence of PST at room temperature
To be Published
3X3S
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BU of 3x3s by Molmil
Recombinant thaumatin in the presence of 1.5M PST at 293K
Descriptor: L(+)-TARTARIC ACID, thaumatin I
Authors:Masuda, T, Okubo, K, Mikami, B.
Deposit date:2015-01-26
Release date:2016-02-03
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Structure of the recombinant thaumatin in the presence of PST at room temperature
To be Published
3WOU
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BU of 3wou by Molmil
Crystal Structure of The Recombinant Thaumatin II at 0.99 A
Descriptor: GLYCEROL, L(+)-TARTARIC ACID, Thaumatin-2
Authors:Masuda, T, Mikami, B, Tani, F.
Deposit date:2013-12-30
Release date:2014-10-22
Method:X-RAY DIFFRACTION (0.99 Å)
Cite:Atomic structure of recombinant thaumatin II reveals flexible conformations in two residues critical for sweetness and three consecutive glycine residues
Biochimie, 106, 2014
3X3O
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BU of 3x3o by Molmil
Recombinant thaumatin in the presence of 0.5M PST at 298K
Descriptor: L(+)-TARTARIC ACID, thaumatin I
Authors:Masuda, T, Okubo, K, Mikami, B.
Deposit date:2015-01-26
Release date:2016-02-03
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Structure of the recombinant thaumatin in the presence of PST at room temperature
To be Published
3X3T
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BU of 3x3t by Molmil
Recombinant thaumatin in the presence of 1.5M PST at 293K
Descriptor: L(+)-TARTARIC ACID, thaumatin I
Authors:Masuda, T, Okubo, K, Mikami, B.
Deposit date:2015-01-26
Release date:2016-02-03
Method:X-RAY DIFFRACTION (1.501 Å)
Cite:Structure of the recombinant thaumatin in the presence of PST at room temperature
To be Published
3X3P
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BU of 3x3p by Molmil
Recombinant thaumatin in the presence of 0.75M PST at 293K
Descriptor: L(+)-TARTARIC ACID, thaumatin I
Authors:Masuda, T, Okubo, K, Mikami, B.
Deposit date:2015-01-26
Release date:2016-02-03
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Recombinant thaumatin in the presence of 0.75M PST at 293K
To be Published
3X30
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BU of 3x30 by Molmil
Crystal structure of metallo-beta-lactamase from Thermotoga maritima
Descriptor: MANGANESE (II) ION, NICKEL (II) ION, UPF0173 metal-dependent hydrolase TM_1162
Authors:Choi, H.J, Kim, H.J, Matsuura, A, Mikami, B, Yoon, H.J, Lee, H.H.
Deposit date:2015-01-07
Release date:2016-02-17
Method:X-RAY DIFFRACTION (1.921 Å)
Cite:Crystal structure of metallo-beta-lactamase from Thermotoga maritima
To be Published
3X3Q
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BU of 3x3q by Molmil
Structure of recombinant thaumatin in the presence of 1.0M PST, pH7 at 293K
Descriptor: L(+)-TARTARIC ACID, thaumatin I
Authors:Masuda, T, Okubo, K, Mikami, B.
Deposit date:2015-01-26
Release date:2016-02-03
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure of the recombinant thaumatin in the presence of PST at room temperature
To be Published
2D5H
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BU of 2d5h by Molmil
Crystal Structure of Recombinant Soybean Proglycinin A3B4 subunit, its Comparison with Mature Glycinin A3B4 subunit, Responsible for Hexamer Assembly
Descriptor: CARBONATE ION, MAGNESIUM ION, glycinin A3B4 subunit
Authors:Itoh, T, Adachi, M, Masuda, T, Mikami, B, Utsumi, S.
Deposit date:2005-11-01
Release date:2006-11-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Conservation and divergence on plant seed 11S globulins based on crystal structures.
Biochim.Biophys.Acta, 2010
3VNX
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BU of 3vnx by Molmil
Crystal structure of ferritin from multicellular green algae, Ulva pertusa.
Descriptor: CALCIUM ION, ferritin
Authors:Masuda, T, Morimoto, S.I, Mikami, B, Toyohara, H.
Deposit date:2012-01-18
Release date:2012-03-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The extension peptide of plant ferritin from sea lettuce contributes to shell stability and surface hydrophobicity.
Protein Sci., 21, 2012
2AHF
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BU of 2ahf by Molmil
Unsaturated glucuronyl hydrolase mutant D88N
Descriptor: unsaturated glucuronyl hydrolase
Authors:Itoh, T, Hashimoto, W, Mikami, B, Murata, K.
Deposit date:2005-07-28
Release date:2006-08-15
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Crystal Structure of Unsaturated Glucuronyl Hydrolase Complexed with Substrate: MOLECULAR INSIGHTS INTO ITS CATALYTIC REACTION MECHANISM
J.Biol.Chem., 281, 2006
2D5J
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BU of 2d5j by Molmil
Unsaturated Glucuronyl Hydrolase Triggers Hydration of Vinyl Ether Group but not of Glycosidic Bond
Descriptor: unsaturated glucuronyl hydrolase
Authors:Itoh, T, Hashimoto, W, Mikami, B, Murata, K.
Deposit date:2005-11-02
Release date:2006-08-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structure of Unsaturated Glucuronyl Hydrolase Complexed with Substrate: MOLECULAR INSIGHTS INTO ITS CATALYTIC REACTION MECHANISM
J.Biol.Chem., 281, 2006
2EF8
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BU of 2ef8 by Molmil
Crystal structure of C.EcoT38IS
Descriptor: Putative transcription factor, SULFATE ION
Authors:Kawanishi, Y, Mikami, B, Kita, K.
Deposit date:2007-02-21
Release date:2008-02-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of C.EcoT38IS
To be published
2Z8R
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BU of 2z8r by Molmil
Crystal structure of rhamnogalacturonan lyase YesW at 1.40 A resolution
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, YesW protein
Authors:Ochiai, A, Itoh, T, Maruyama, Y, Kawamata, A, Mikami, B, Hashimoto, W, Murata, K.
Deposit date:2007-09-10
Release date:2007-10-16
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:A Novel Structural Fold in Polysaccharide Lyases: BACILLUS SUBTILIS FAMILY 11 RHAMNOGALACTURONAN LYASE YesW WITH AN EIGHT-BLADED -PROPELLER
J.Biol.Chem., 282, 2007
2D3I
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BU of 2d3i by Molmil
Crystal Structure of Aluminum-Bound Ovotransferrin at 2.15 Angstrom Resolution
Descriptor: ALUMINUM ION, BICARBONATE ION, Ovotransferrin
Authors:Mizutani, K, Mikami, B, Aibara, S, Hirose, M.
Deposit date:2005-09-28
Release date:2005-11-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structure of aluminium-bound ovotransferrin at 2.15 Angstroms resolution.
Acta Crystallogr.,Sect.D, 61, 2005
2E22
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BU of 2e22 by Molmil
Crystal structure of xanthan lyase in complex with mannose
Descriptor: Xanthan lyase, alpha-D-mannopyranose
Authors:Maruyama, Y, Mikami, B, Hashimoto, W, Murata, K.
Deposit date:2006-11-07
Release date:2007-01-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:A Structural Factor Responsible for Substrate Recognition by Bacillus sp. GL1 Xanthan Lyase that Acts Specifically on Pyruvated Side Chains of Xanthan
Biochemistry, 46, 2007
2CV6
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BU of 2cv6 by Molmil
Crystal Structure of 8Salpha Globulin, the Major Seed Storage Protein of Mungbean
Descriptor: Seed storage protein
Authors:Itoh, T, Garcia, R.N, Adachi, M, Maruyama, Y, Tecson-Mendoza, E.M, Mikami, B, Utsumi, S.
Deposit date:2005-05-31
Release date:2006-06-27
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structure of 8Salpha globulin, the major seed storage protein of mung bean.
Acta Crystallogr.,Sect.D, 62, 2006
2E9Q
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BU of 2e9q by Molmil
Recombinant pro-11S globulin of pumpkin
Descriptor: 11S globulin subunit beta, CHLORIDE ION, PHOSPHATE ION
Authors:Fukuda, T, Prak, K, Itoh, T, Masuda, T, Maruyama, N, Mikami, B, Utsumi, S.
Deposit date:2007-01-26
Release date:2008-02-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Conservation and divergence on plant seed 11S globulins based on crystal structures.
Biochim.Biophys.Acta, 2010
2E24
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BU of 2e24 by Molmil
crystal structure of a mutant (R612A) of xanthan lyase
Descriptor: DI(HYDROXYETHYL)ETHER, Xanthan lyase
Authors:Maruyama, Y, Mikami, B, Hashimoto, W, Murata, K.
Deposit date:2006-11-07
Release date:2007-01-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:A Structural Factor Responsible for Substrate Recognition by Bacillus sp. GL1 Xanthan Lyase that Acts Specifically on Pyruvated Side Chains of Xanthan
Biochemistry, 46, 2007
2Z9X
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BU of 2z9x by Molmil
Crystal structure of pyridoxamine-pyruvate aminotransferase complexed with pyridoxyl-L-alanine
Descriptor: 3-HYDROXY-5-(HYDROXYMETHYL)-2-METHYLISONICOTINALDEHYDE, ALANINE, Aspartate aminotransferase, ...
Authors:Yoshikane, Y, Yokochi, N, Yamasaki, M, Mizutani, K, Ohnishi, K, Mikami, B, Hayashi, H, Yagi, T.
Deposit date:2007-09-26
Release date:2007-11-06
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Crystal structure of pyridoxamine-pyruvate aminotransferase from Mesorhizobium loti MAFF303099
J.Biol.Chem., 283, 2008
2EVX
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BU of 2evx by Molmil
Crystal structure of pumpkin seed globulin
Descriptor: 11S globulin beta subunit, MAGNESIUM ION
Authors:Itoh, T, Fukuda, T, Mikami, B, Utsumi, S.
Deposit date:2005-11-01
Release date:2006-11-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of Pumpkin Seed Globulin
To be Published

221051

數據於2024-06-12公開中

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